RNA–Protein interactions for RNA: ENST00000540022.5

TNFRSF1A-213, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1A, Length 1,527 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-213ENST00000540022 PRDM13Q9H4Q3 707 aa15.15■□□□□ 0.02
TNFRSF1A-213ENST00000540022 A0A0B4J2A0 478 aa15.14■□□□□ 0.01
TNFRSF1A-213ENST00000540022 SHOXO15266 292 aa15.14■□□□□ 0.01
TNFRSF1A-213ENST00000540022 MOSP00540 346 aa15.14■□□□□ 0.01
TNFRSF1A-213ENST00000540022 FAM106CPP0CH98 169 aa15.14■□□□□ 0.01
TNFRSF1A-213ENST00000540022 SRD5A1P18405 259 aa15.14■□□□□ 0.01
TNFRSF1A-213ENST00000540022 SRPXP78539 464 aa15.14■□□□□ 0.01
TNFRSF1A-213ENST00000540022 AANATQ16613 207 aa15.14■□□□□ 0.01
TNFRSF1A-213ENST00000540022 Q6YL49 198 aa15.14■□□□□ 0.01
TNFRSF1A-213ENST00000540022 SLC35G3Q8N808 338 aa15.14■□□□□ 0.01
TNFRSF1A-213ENST00000540022 OR2T10Q8NGZ9 312 aa15.14■□□□□ 0.01
TNFRSF1A-213ENST00000540022 OSR1Q8TAX0 266 aaPredicted RBP15.14■□□□□ 0.01
TNFRSF1A-213ENST00000540022 ZDHHC16Q969W1 377 aa15.14■□□□□ 0.01
TNFRSF1A-213ENST00000540022 HARBI1Q96MB7 349 aa15.14■□□□□ 0.01
TNFRSF1A-213ENST00000540022 COMMD9Q9P000 198 aa15.14■□□□□ 0.01
TNFRSF1A-213ENST00000540022 SHPKQ9UHJ6 478 aa15.14■□□□□ 0.01
TNFRSF1A-213ENST00000540022 A0A1B0GVG6 124 aa15.13■□□□□ 0.01
TNFRSF1A-213ENST00000540022 H3BUX3 64 aa15.13■□□□□ 0.01
TNFRSF1A-213ENST00000540022 KRASP01116 189 aa15.13■□□□□ 0.01
TNFRSF1A-213ENST00000540022 CNTFRP26992 372 aa15.13■□□□□ 0.01
TNFRSF1A-213ENST00000540022 G6PCP35575 357 aa15.13■□□□□ 0.01
TNFRSF1A-213ENST00000540022 LYZL2Q7Z4W2 148 aa15.13■□□□□ 0.01
TNFRSF1A-213ENST00000540022 VKORC1L1Q8N0U8 176 aa15.13■□□□□ 0.01
TNFRSF1A-213ENST00000540022 Q8N6K4 173 aa15.13■□□□□ 0.01
TNFRSF1A-213ENST00000540022 UXS1Q8NBZ7 420 aa15.13■□□□□ 0.01
TNFRSF1A-213ENST00000540022 IL22RA2Q969J5 263 aa15.13■□□□□ 0.01
TNFRSF1A-213ENST00000540022 R3HDM4Q96D70 268 aa15.13■□□□□ 0.01
TNFRSF1A-213ENST00000540022 SEC22AQ96IW7 307 aa15.13■□□□□ 0.01
TNFRSF1A-213ENST00000540022 DBX1A6NMT0 343 aa15.12■□□□□ 0.01
TNFRSF1A-213ENST00000540022 ADAP1O75689 374 aa15.12■□□□□ 0.01
TNFRSF1A-213ENST00000540022 IGKV1-5P01602 117 aa15.12■□□□□ 0.01
TNFRSF1A-213ENST00000540022 IGLV2-23P01705 113 aa15.12■□□□□ 0.01
TNFRSF1A-213ENST00000540022 NQO2P16083 231 aa15.12■□□□□ 0.01
TNFRSF1A-213ENST00000540022 IER3P46695 156 aa15.12■□□□□ 0.01
TNFRSF1A-213ENST00000540022 SSX9Q7RTT3 188 aa15.12■□□□□ 0.01
TNFRSF1A-213ENST00000540022 SIGLECL1Q8N7X8 197 aa15.12■□□□□ 0.01
TNFRSF1A-213ENST00000540022 RNF5Q99942 180 aa15.12■□□□□ 0.01
TNFRSF1A-213ENST00000540022 A0A0G2JRQ6 117 aa15.12■□□□□ 0.01
TNFRSF1A-213ENST00000540022 MARCH11A6NNE9 402 aa15.12■□□□□ 0.01
TNFRSF1A-213ENST00000540022 SSNA1O43805 119 aa15.12■□□□□ 0.01
TNFRSF1A-213ENST00000540022 HRASP01112 189 aa15.12■□□□□ 0.01
TNFRSF1A-213ENST00000540022 IGHV4-59P01825 116 aa15.12■□□□□ 0.01
TNFRSF1A-213ENST00000540022 HOXB5P09067 269 aa15.12■□□□□ 0.01
TNFRSF1A-213ENST00000540022 TMEM11P17152 192 aa15.12■□□□□ 0.01
TNFRSF1A-213ENST00000540022 LGALS7P47929 136 aa15.12■□□□□ 0.01
TNFRSF1A-213ENST00000540022 F2RL1P55085 397 aa15.12■□□□□ 0.01
TNFRSF1A-213ENST00000540022 C2orf68Q2NKX9 166 aa15.12■□□□□ 0.01
TNFRSF1A-213ENST00000540022 RHOVQ96L33 236 aa15.12■□□□□ 0.01
TNFRSF1A-213ENST00000540022 TCF19Q9Y242 345 aa15.12■□□□□ 0.01
TNFRSF1A-213ENST00000540022 AKR1C2P52895 323 aa15.11■□□□□ 0.01
TNFRSF1A-213ENST00000540022 LY6EQ16553 131 aa15.11■□□□□ 0.01
TNFRSF1A-213ENST00000540022 POU2AF1Q16633 256 aa15.11■□□□□ 0.01
TNFRSF1A-213ENST00000540022 hCG_2014768A0A024R1R8 64 aa15.1■□□□□ 0.01
TNFRSF1A-213ENST00000540022 A6NDX4 124 aa15.1■□□□□ 0.01
TNFRSF1A-213ENST00000540022 CCSO14618 274 aa15.1■□□□□ 0.01
TNFRSF1A-213ENST00000540022 SAA1P0DJI8 122 aaPredicted RBP15.1■□□□□ 0.01
TNFRSF1A-213ENST00000540022 PSG5Q15238 335 aa15.1■□□□□ 0.01
TNFRSF1A-213ENST00000540022 MMDQ15546 238 aa15.1■□□□□ 0.01
TNFRSF1A-213ENST00000540022 IZUMO4Q1ZYL8 232 aa15.1■□□□□ 0.01
TNFRSF1A-213ENST00000540022 GGNBP1Q5YKI7 109 aa15.1■□□□□ 0.01
TNFRSF1A-213ENST00000540022 TMEM219Q86XT9 240 aa15.1■□□□□ 0.01
TNFRSF1A-213ENST00000540022 DMBX1Q8NFW5 382 aa15.1■□□□□ 0.01
TNFRSF1A-213ENST00000540022 TSNAXQ99598 290 aaKnown RBP15.1■□□□□ 0.01
TNFRSF1A-213ENST00000540022 PLSCR3Q9NRY6 295 aa15.1■□□□□ 0.01
TNFRSF1A-213ENST00000540022 DUXBA0A1W2PPF3 345 aa15.09■□□□□ 0.01
TNFRSF1A-213ENST00000540022 HOXA3O43365 443 aaPredicted RBP15.09■□□□□ 0.01
TNFRSF1A-213ENST00000540022 SLC25A17O43808 307 aa15.09■□□□□ 0.01
TNFRSF1A-213ENST00000540022 ATG12O94817 140 aa15.09■□□□□ 0.01
TNFRSF1A-213ENST00000540022 P0C879 139 aa15.09■□□□□ 0.01
TNFRSF1A-213ENST00000540022 VDAC1P21796 283 aa15.09■□□□□ 0.01
TNFRSF1A-213ENST00000540022 ERVK-16P61578 105 aa15.09■□□□□ 0.01
TNFRSF1A-213ENST00000540022 SCGB2A2Q13296 93 aa15.09■□□□□ 0.01
TNFRSF1A-213ENST00000540022 NMSQ5H8A3 153 aa15.09■□□□□ 0.01
TNFRSF1A-213ENST00000540022 OR4A47Q6IF82 309 aa15.09■□□□□ 0.01
TNFRSF1A-213ENST00000540022 NPBQ8NG41 125 aa15.09■□□□□ 0.01
TNFRSF1A-213ENST00000540022 SSMEM1Q8WWF3 244 aa15.09■□□□□ 0.01
TNFRSF1A-213ENST00000540022 GPR146Q96CH1 333 aa15.09■□□□□ 0.01
TNFRSF1A-213ENST00000540022 TMEM140Q9NV12 185 aa15.09■□□□□ 0.01
TNFRSF1A-213ENST00000540022 MPTX1A8MV57 137 aa15.08■□□□□ 0.01
TNFRSF1A-213ENST00000540022 NBR2O15453 112 aa15.08■□□□□ 0.01
TNFRSF1A-213ENST00000540022 UBE2KP61086 200 aa15.08■□□□□ 0.01
TNFRSF1A-213ENST00000540022 VMA21Q3ZAQ7 101 aa15.08■□□□□ 0.01
TNFRSF1A-213ENST00000540022 PUSL1Q8N0Z8 303 aaKnown RBP15.08■□□□□ 0.01
TNFRSF1A-213ENST00000540022 CADM3Q8N126 398 aa15.08■□□□□ 0.01
TNFRSF1A-213ENST00000540022 OR5R1Q8NH85 324 aa15.08■□□□□ 0.01
TNFRSF1A-213ENST00000540022 RNASE11Q8TAA1 199 aaKnown RBP15.08■□□□□ 0.01
TNFRSF1A-213ENST00000540022 LSM10Q969L4 123 aaKnown RBP15.08■□□□□ 0.01
TNFRSF1A-213ENST00000540022 RRNAD1Q96FB5 475 aaKnown RBP15.08■□□□□ 0.01
TNFRSF1A-213ENST00000540022 AIFM2Q9BRQ8 373 aa15.08■□□□□ 0.01
TNFRSF1A-213ENST00000540022 MED28Q9H204 178 aa15.08■□□□□ 0.01
TNFRSF1A-213ENST00000540022 FBXL15Q9H469 300 aa15.08■□□□□ 0.01
TNFRSF1A-213ENST00000540022 RAB18Q9NP72 206 aa15.08■□□□□ 0.01
TNFRSF1A-213ENST00000540022 TPSG1Q9NRR2 321 aa15.08■□□□□ 0.01
TNFRSF1A-213ENST00000540022 TNFRSF19Q9NS68 423 aa15.08■□□□□ 0.01
TNFRSF1A-213ENST00000540022 TMED3Q9Y3Q3 217 aa15.08■□□□□ 0.01
TNFRSF1A-213ENST00000540022 MMP24Q9Y5R2 645 aa15.08■□□□□ 0.01
TNFRSF1A-213ENST00000540022 PIGBOS1A0A0B4J2F0 54 aa15.07■□□□□ 0
TNFRSF1A-213ENST00000540022 RRHO14718 337 aa15.07■□□□□ 0
TNFRSF1A-213ENST00000540022 NDUFA3O95167 84 aa15.07■□□□□ 0
TNFRSF1A-213ENST00000540022 CRYGBP07316 175 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms