RNA–Protein interactions for RNA: ENST00000538120.5

CLIP1-210, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 3

Gene CLIP1, Length 2,472 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-210ENST00000538120 ZNF585BQ52M93 769 aa8.93□□□□□ -0.98
CLIP1-210ENST00000538120 ZNF506Q5JVG8 444 aa8.93□□□□□ -0.98
CLIP1-210ENST00000538120 WFDC8Q8IUA0 241 aa8.93□□□□□ -0.98
CLIP1-210ENST00000538120 HIST3H2BBQ8N257 126 aa8.93□□□□□ -0.98
CLIP1-210ENST00000538120 DRAM1Q8N682 238 aa8.93□□□□□ -0.98
CLIP1-210ENST00000538120 FRZBQ92765 325 aa8.93□□□□□ -0.98
CLIP1-210ENST00000538120 TNFRSF14Q92956 283 aa8.93□□□□□ -0.98
CLIP1-210ENST00000538120 GALMQ96C23 342 aa8.93□□□□□ -0.98
CLIP1-210ENST00000538120 GPR146Q96CH1 333 aa8.93□□□□□ -0.98
CLIP1-210ENST00000538120 C15orf65H3BRN8 121 aa8.92□□□□□ -0.98
CLIP1-210ENST00000538120 HSPB1P04792 205 aaKnown RBP8.92□□□□□ -0.98
CLIP1-210ENST00000538120 SSTR5P35346 364 aa8.92□□□□□ -0.98
CLIP1-210ENST00000538120 ID3Q02535 119 aa8.92□□□□□ -0.98
CLIP1-210ENST00000538120 EIF4EBP1Q13541 118 aaPredicted RBP8.92□□□□□ -0.98
CLIP1-210ENST00000538120 GAMTQ14353 236 aa8.92□□□□□ -0.98
CLIP1-210ENST00000538120 FAM201AQ5SY85 155 aa8.92□□□□□ -0.98
CLIP1-210ENST00000538120 AKR1C8PQ5T2L2 129 aa8.92□□□□□ -0.98
CLIP1-210ENST00000538120 LURAP1Q96LR2 239 aa8.92□□□□□ -0.98
CLIP1-210ENST00000538120 SSX3Q99909 188 aa8.92□□□□□ -0.98
CLIP1-210ENST00000538120 VSIRQ9H7M9 311 aa8.92□□□□□ -0.98
CLIP1-210ENST00000538120 UNKLQ9H9P5 680 aaKnown RBP8.92□□□□□ -0.98
CLIP1-210ENST00000538120 GNG13Q9P2W3 67 aa8.92□□□□□ -0.98
CLIP1-210ENST00000538120 CHD3Q12873 2000 aaKnown RBP8.92□□□□□ -0.98
CLIP1-210ENST00000538120 KIAA1324LA8MWY0 1029 aaPredicted RBP8.92□□□□□ -0.98
CLIP1-210ENST00000538120 MBP02144 154 aa8.92□□□□□ -0.98
CLIP1-210ENST00000538120 LIPFP07098 398 aa8.92□□□□□ -0.98
CLIP1-210ENST00000538120 FABP4P15090 132 aa8.92□□□□□ -0.98
CLIP1-210ENST00000538120 S100GP29377 79 aa8.92□□□□□ -0.98
CLIP1-210ENST00000538120 IL2RGP31785 369 aa8.92□□□□□ -0.98
CLIP1-210ENST00000538120 DEFA6Q01524 100 aa8.92□□□□□ -0.98
CLIP1-210ENST00000538120 TMEM108Q6UXF1 575 aa8.92□□□□□ -0.98
CLIP1-210ENST00000538120 Q6ZRM9 215 aa8.92□□□□□ -0.98
CLIP1-210ENST00000538120 REC114Q7Z4M0 266 aa8.92□□□□□ -0.98
CLIP1-210ENST00000538120 SPIN2AQ99865 258 aa8.92□□□□□ -0.98
CLIP1-210ENST00000538120 SPIN2BQ9BPZ2 258 aa8.92□□□□□ -0.98
CLIP1-210ENST00000538120 SLC25A31Q9H0C2 315 aa8.92□□□□□ -0.98
CLIP1-210ENST00000538120 RNF150Q9ULK6 438 aa8.92□□□□□ -0.98
CLIP1-210ENST00000538120 KCNS2Q9ULS6 477 aa8.92□□□□□ -0.98
CLIP1-210ENST00000538120 PTPRQQ9UMZ3 2332 aa8.91□□□□□ -0.98
CLIP1-210ENST00000538120 BTBD17A6NE02 478 aa8.91□□□□□ -0.98
CLIP1-210ENST00000538120 ZFP92A6NM28 416 aa8.91□□□□□ -0.98
CLIP1-210ENST00000538120 SEC14L6B5MCN3 397 aa8.91□□□□□ -0.98
CLIP1-210ENST00000538120 PPP1R2P9O14990 202 aa8.91□□□□□ -0.98
CLIP1-210ENST00000538120 IGKV1-5P01602 117 aa8.91□□□□□ -0.98
CLIP1-210ENST00000538120 TAS2R60P59551 318 aa8.91□□□□□ -0.98
CLIP1-210ENST00000538120 RAB11AP62491 216 aa8.91□□□□□ -0.98
CLIP1-210ENST00000538120 TMEM267Q0VDI3 215 aaPredicted RBP8.91□□□□□ -0.98
CLIP1-210ENST00000538120 FAM90A2PQ658T7 463 aa8.91□□□□□ -0.98
CLIP1-210ENST00000538120 SSX7Q7RTT5 188 aa8.91□□□□□ -0.98
CLIP1-210ENST00000538120 FAM222BQ8WU58 562 aa8.91□□□□□ -0.98
CLIP1-210ENST00000538120 RNF125Q96EQ8 232 aa8.91□□□□□ -0.98
CLIP1-210ENST00000538120 C14orf144Q96I85 54 aa8.91□□□□□ -0.98
CLIP1-210ENST00000538120 SNX22Q96L94 193 aa8.91□□□□□ -0.98
CLIP1-210ENST00000538120 RSG1Q9BU20 258 aa8.91□□□□□ -0.98
CLIP1-210ENST00000538120 PRO1933Q9H354 126 aa8.91□□□□□ -0.98
CLIP1-210ENST00000538120 GCM1Q9NP62 436 aa8.91□□□□□ -0.98
CLIP1-210ENST00000538120 RNF115Q9Y4L5 304 aa8.91□□□□□ -0.98
CLIP1-210ENST00000538120 RBM7Q9Y580 266 aaKnown RBP8.91□□□□□ -0.98
CLIP1-210ENST00000538120 SERPINE2P07093 398 aa8.91□□□□□ -0.98
CLIP1-210ENST00000538120 HIST1H1BP16401 226 aaKnown RBP8.91□□□□□ -0.98
CLIP1-210ENST00000538120 FGF8P55075 233 aaPredicted RBP8.91□□□□□ -0.98
CLIP1-210ENST00000538120 UCNP55089 124 aa8.91□□□□□ -0.98
CLIP1-210ENST00000538120 TNFAIP6P98066 277 aaPredicted RBP8.91□□□□□ -0.98
CLIP1-210ENST00000538120 TLE1Q04724 770 aa8.91□□□□□ -0.98
CLIP1-210ENST00000538120 BSPH1Q075Z2 132 aa8.91□□□□□ -0.98
CLIP1-210ENST00000538120 EDDM3AQ14507 147 aa8.91□□□□□ -0.98
CLIP1-210ENST00000538120 CR1LQ2VPA4 569 aa8.91□□□□□ -0.98
CLIP1-210ENST00000538120 ZNF645Q8N7E2 425 aa8.91□□□□□ -0.98
CLIP1-210ENST00000538120 RFESDQ8TAC1 157 aa8.91□□□□□ -0.98
CLIP1-210ENST00000538120 ABHD14BQ96IU4 210 aa8.91□□□□□ -0.98
CLIP1-210ENST00000538120 ZNF665Q9H7R5 613 aa8.91□□□□□ -0.98
CLIP1-210ENST00000538120 LOC102723971A0A1B0GUV8 181 aa8.9□□□□□ -0.98
CLIP1-210ENST00000538120 SCGB1D1O95968 90 aa8.9□□□□□ -0.98
CLIP1-210ENST00000538120 SELENOVP59797 346 aa8.9□□□□□ -0.98
CLIP1-210ENST00000538120 RPL30P62888 115 aaKnown RBP8.9□□□□□ -0.98
CLIP1-210ENST00000538120 LCN15Q6UWW0 184 aa8.9□□□□□ -0.98
CLIP1-210ENST00000538120 ZGRF1Q86YA3 2104 aa8.9□□□□□ -0.98
CLIP1-210ENST00000538120 TGIF2LYQ8IUE0 185 aa8.9□□□□□ -0.98
CLIP1-210ENST00000538120 ZNRF1Q8ND25 227 aa8.9□□□□□ -0.98
CLIP1-210ENST00000538120 RND1Q92730 232 aa8.9□□□□□ -0.98
CLIP1-210ENST00000538120 GNPNAT1Q96EK6 184 aaPredicted RBP8.9□□□□□ -0.98
CLIP1-210ENST00000538120 FAM210BQ96KR6 192 aa8.9□□□□□ -0.98
CLIP1-210ENST00000538120 WFIKKN1Q96NZ8 548 aa8.9□□□□□ -0.98
CLIP1-210ENST00000538120 IGHV3-43A0A0B4J1X8 118 aa8.9□□□□□ -0.99
CLIP1-210ENST00000538120 A0A1B0GU03 582 aa8.9□□□□□ -0.99
CLIP1-210ENST00000538120 A0A1B0GV90 55 aa8.9□□□□□ -0.99
CLIP1-210ENST00000538120 ODAMA1E959 279 aa8.9□□□□□ -0.99
CLIP1-210ENST00000538120 MGST3O14880 152 aa8.9□□□□□ -0.99
CLIP1-210ENST00000538120 IGHV3-43DP0DP04 118 aa8.9□□□□□ -0.99
CLIP1-210ENST00000538120 SLC25A6P12236 298 aa8.9□□□□□ -0.99
CLIP1-210ENST00000538120 BRWD1-AS2P59051 145 aa8.9□□□□□ -0.99
CLIP1-210ENST00000538120 TAS2R30P59541 319 aa8.9□□□□□ -0.99
CLIP1-210ENST00000538120 SUMO1P63165 101 aaKnown RBP8.9□□□□□ -0.99
CLIP1-210ENST00000538120 TLE4Q04727 773 aa8.9□□□□□ -0.99
CLIP1-210ENST00000538120 RBPJQ06330 500 aa8.9□□□□□ -0.99
CLIP1-210ENST00000538120 ZNF726P1Q15940 193 aa8.9□□□□□ -0.99
CLIP1-210ENST00000538120 SLC35E3Q7Z769 313 aa8.9□□□□□ -0.99
CLIP1-210ENST00000538120 LSM10Q969L4 123 aaKnown RBP8.9□□□□□ -0.99
CLIP1-210ENST00000538120 MDFIQ99750 246 aa8.9□□□□□ -0.99
CLIP1-210ENST00000538120 ATP5SQ99766 215 aa8.9□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms