RNA–Protein interactions for RNA: ENST00000535958.1

TNFRSF1A-207, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 4

Gene TNFRSF1A, Length 568 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-207ENST00000535958 DUTP33316 252 aaKnown RBP9.78□□□□□ -0.84
TNFRSF1A-207ENST00000535958 MECP2P51608 486 aaKnown RBP9.78□□□□□ -0.84
TNFRSF1A-207ENST00000535958 PSMD7P51665 324 aa9.78□□□□□ -0.84
TNFRSF1A-207ENST00000535958 ANKRD55Q3KP44 614 aa9.78□□□□□ -0.84
TNFRSF1A-207ENST00000535958 PLAC9Q5JTB6 97 aa9.78□□□□□ -0.84
TNFRSF1A-207ENST00000535958 KCTD9Q7L273 389 aa9.78□□□□□ -0.84
TNFRSF1A-207ENST00000535958 LINC00476Q8WZB0 136 aa9.78□□□□□ -0.84
TNFRSF1A-207ENST00000535958 WDR89Q96FK6 387 aaPredicted RBP9.78□□□□□ -0.84
TNFRSF1A-207ENST00000535958 GGTLC1Q9BX51 225 aa9.78□□□□□ -0.84
TNFRSF1A-207ENST00000535958 ZNF430Q9H8G1 570 aaPredicted RBP9.78□□□□□ -0.84
TNFRSF1A-207ENST00000535958 ZC4H2Q9NQZ6 224 aa9.78□□□□□ -0.84
TNFRSF1A-207ENST00000535958 FKBP14Q9NWM8 211 aa9.78□□□□□ -0.84
TNFRSF1A-207ENST00000535958 ZNF257Q9Y2Q1 563 aa9.78□□□□□ -0.84
TNFRSF1A-207ENST00000535958 PRELID3BQ9Y3B1 194 aa9.78□□□□□ -0.84
TNFRSF1A-207ENST00000535958 LOC102724200A0A096LPH7 203 aaPredicted RBP9.77□□□□□ -0.85
TNFRSF1A-207ENST00000535958 TRBV9A0A0B4J1U6 114 aa9.77□□□□□ -0.85
TNFRSF1A-207ENST00000535958 NUPR2A6NF83 97 aa9.77□□□□□ -0.85
TNFRSF1A-207ENST00000535958 ZNF785A8K8V0 405 aa9.77□□□□□ -0.85
TNFRSF1A-207ENST00000535958 RBMXL2O75526 392 aaKnown RBP9.77□□□□□ -0.85
TNFRSF1A-207ENST00000535958 CD36P16671 472 aa9.77□□□□□ -0.85
TNFRSF1A-207ENST00000535958 ARL3P36405 182 aa9.77□□□□□ -0.85
TNFRSF1A-207ENST00000535958 KIR2DS2P43631 304 aa9.77□□□□□ -0.85
TNFRSF1A-207ENST00000535958 ZNF45Q02386 682 aa9.77□□□□□ -0.85
TNFRSF1A-207ENST00000535958 ARFRP1Q13795 201 aa9.77□□□□□ -0.85
TNFRSF1A-207ENST00000535958 C2orf76Q3KRA6 126 aa9.77□□□□□ -0.85
TNFRSF1A-207ENST00000535958 FAM106AQ4KMX7 169 aa9.77□□□□□ -0.85
TNFRSF1A-207ENST00000535958 ZNF57Q68EA5 555 aaPredicted RBP9.77□□□□□ -0.85
TNFRSF1A-207ENST00000535958 TTC9CQ8N5M4 171 aa9.77□□□□□ -0.85
TNFRSF1A-207ENST00000535958 VSTM2AQ8TAG5 236 aa9.77□□□□□ -0.85
TNFRSF1A-207ENST00000535958 MAFIPQ8WZ33 124 aa9.77□□□□□ -0.85
TNFRSF1A-207ENST00000535958 ST6GALNAC5Q9BVH7 336 aa9.77□□□□□ -0.85
TNFRSF1A-207ENST00000535958 RAB22AQ9UL26 194 aa9.77□□□□□ -0.85
TNFRSF1A-207ENST00000535958 PLECQ15149 4684 aaKnown RBP9.77□□□□□ -0.85
TNFRSF1A-207ENST00000535958 ZNF320A2RRD8 509 aa9.76□□□□□ -0.85
TNFRSF1A-207ENST00000535958 LGALS9O00182 355 aa9.76□□□□□ -0.85
TNFRSF1A-207ENST00000535958 EBAG9O00559 213 aa9.76□□□□□ -0.85
TNFRSF1A-207ENST00000535958 FCGR3BO75015 233 aa9.76□□□□□ -0.85
TNFRSF1A-207ENST00000535958 OR2C1O95371 312 aa9.76□□□□□ -0.85
TNFRSF1A-207ENST00000535958 HLA-AP01891 365 aaKnown RBP9.76□□□□□ -0.85
TNFRSF1A-207ENST00000535958 CD37P11049 281 aa9.76□□□□□ -0.85
TNFRSF1A-207ENST00000535958 RCN1Q15293 331 aa9.76□□□□□ -0.85
TNFRSF1A-207ENST00000535958 C10orf55Q5SWW7 151 aa9.76□□□□□ -0.85
TNFRSF1A-207ENST00000535958 HES5Q5TA89 166 aa9.76□□□□□ -0.85
TNFRSF1A-207ENST00000535958 OR4A47Q6IF82 309 aa9.76□□□□□ -0.85
TNFRSF1A-207ENST00000535958 LAIR2Q6ISS4 152 aa9.76□□□□□ -0.85
TNFRSF1A-207ENST00000535958 FBLIM1Q8WUP2 373 aa9.76□□□□□ -0.85
TNFRSF1A-207ENST00000535958 EEF1AKMT3Q96AZ1 226 aa9.76□□□□□ -0.85
TNFRSF1A-207ENST00000535958 C5orf30Q96GV9 206 aa9.76□□□□□ -0.85
TNFRSF1A-207ENST00000535958 FYTTD1Q96QD9 318 aaKnown RBP9.76□□□□□ -0.85
TNFRSF1A-207ENST00000535958 GFI1Q99684 422 aa9.76□□□□□ -0.85
TNFRSF1A-207ENST00000535958 FBXL7Q9UJT9 491 aa9.76□□□□□ -0.85
TNFRSF1A-207ENST00000535958 LSM2Q9Y333 95 aaKnown RBP9.76□□□□□ -0.85
TNFRSF1A-207ENST00000535958 V9GY05 133 aa9.76□□□□□ -0.85
TNFRSF1A-207ENST00000535958 TMEM272A0A1B0GTI8 110 aa9.75□□□□□ -0.85
TNFRSF1A-207ENST00000535958 METTL21EPA6NDL7 271 aa9.75□□□□□ -0.85
TNFRSF1A-207ENST00000535958 LINC00473A8K010 186 aa9.75□□□□□ -0.85
TNFRSF1A-207ENST00000535958 J3QRK9 145 aa9.75□□□□□ -0.85
TNFRSF1A-207ENST00000535958 PDCD5O14737 125 aa9.75□□□□□ -0.85
TNFRSF1A-207ENST00000535958 SCAF4O95104 1147 aaKnown RBP9.75□□□□□ -0.85
TNFRSF1A-207ENST00000535958 NDUFB8O95169 186 aa9.75□□□□□ -0.85
TNFRSF1A-207ENST00000535958 DEFA4P12838 97 aa9.75□□□□□ -0.85
TNFRSF1A-207ENST00000535958 GNB3P16520 340 aa9.75□□□□□ -0.85
TNFRSF1A-207ENST00000535958 CBLN1P23435 193 aa9.75□□□□□ -0.85
TNFRSF1A-207ENST00000535958 RPL27AP46776 148 aaKnown RBP9.75□□□□□ -0.85
TNFRSF1A-207ENST00000535958 RPS25P62851 125 aaKnown RBP9.75□□□□□ -0.85
TNFRSF1A-207ENST00000535958 OR2B11Q5JQS5 317 aa9.75□□□□□ -0.85
TNFRSF1A-207ENST00000535958 RBPMS2Q6ZRY4 209 aaKnown RBP9.75□□□□□ -0.85
TNFRSF1A-207ENST00000535958 ZNF645Q8N7E2 425 aa9.75□□□□□ -0.85
TNFRSF1A-207ENST00000535958 OR10R2Q8NGX6 335 aa9.75□□□□□ -0.85
TNFRSF1A-207ENST00000535958 CACNG8Q8WXS5 425 aa9.75□□□□□ -0.85
TNFRSF1A-207ENST00000535958 DDB2Q92466 427 aa9.75□□□□□ -0.85
TNFRSF1A-207ENST00000535958 HMX3A6NHT5 357 aa9.74□□□□□ -0.85
TNFRSF1A-207ENST00000535958 SLC22A5O76082 557 aa9.74□□□□□ -0.85
TNFRSF1A-207ENST00000535958 IGHV3-23P01764 117 aa9.74□□□□□ -0.85
TNFRSF1A-207ENST00000535958 HIST1H1DP16402 221 aaKnown RBP9.74□□□□□ -0.85
TNFRSF1A-207ENST00000535958 APOC4P55056 127 aa9.74□□□□□ -0.85
TNFRSF1A-207ENST00000535958 ARL6IP1Q15041 203 aa9.74□□□□□ -0.85
TNFRSF1A-207ENST00000535958 MRGPRG-AS1Q2M3A8 158 aa9.74□□□□□ -0.85
TNFRSF1A-207ENST00000535958 CLEC19AQ6UXS0 136 aa9.74□□□□□ -0.85
TNFRSF1A-207ENST00000535958 TMEM91Q6ZNR0 172 aa9.74□□□□□ -0.85
TNFRSF1A-207ENST00000535958 GPHB5Q86YW7 130 aa9.74□□□□□ -0.85
TNFRSF1A-207ENST00000535958 H1FOOQ8IZA3 346 aaPredicted RBP9.74□□□□□ -0.85
TNFRSF1A-207ENST00000535958 SLC38A6Q8IZM9 456 aa9.74□□□□□ -0.85
TNFRSF1A-207ENST00000535958 TMEM61Q8N0U2 210 aa9.74□□□□□ -0.85
TNFRSF1A-207ENST00000535958 OR1L6Q8NGR2 347 aa9.74□□□□□ -0.85
TNFRSF1A-207ENST00000535958 OR4S2Q8NH73 311 aa9.74□□□□□ -0.85
TNFRSF1A-207ENST00000535958 CCDC90BQ9GZT6 254 aa9.74□□□□□ -0.85
TNFRSF1A-207ENST00000535958 OR51E2Q9H255 320 aa9.74□□□□□ -0.85
TNFRSF1A-207ENST00000535958 KLK5Q9Y337 293 aaPredicted RBP9.74□□□□□ -0.85
TNFRSF1A-207ENST00000535958 TPRKBQ9Y3C4 175 aa9.74□□□□□ -0.85
TNFRSF1A-207ENST00000535958 SELENOKQ9Y6D0 94 aa9.74□□□□□ -0.85
TNFRSF1A-207ENST00000535958 NPIPB5A8MRT5 1133 aa9.73□□□□□ -0.85
TNFRSF1A-207ENST00000535958 MFNGO00587 321 aa9.73□□□□□ -0.85
TNFRSF1A-207ENST00000535958 CTXN2P0C2S0 81 aa9.73□□□□□ -0.85
TNFRSF1A-207ENST00000535958 HIST1H1BP16401 226 aaKnown RBP9.73□□□□□ -0.85
TNFRSF1A-207ENST00000535958 EDN2P20800 178 aa9.73□□□□□ -0.85
TNFRSF1A-207ENST00000535958 CRHBPP24387 322 aa9.73□□□□□ -0.85
TNFRSF1A-207ENST00000535958 MYL9P24844 172 aa9.73□□□□□ -0.85
TNFRSF1A-207ENST00000535958 MAS1LP35410 378 aa9.73□□□□□ -0.85
TNFRSF1A-207ENST00000535958 SSX1Q16384 188 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms