RNA–Protein interactions for RNA: ENST00000535607.5

USP28-202, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 3

Gene USP28, Length 683 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-202ENST00000535607 C19orf35Q6ZS72 473 aa5.53□□□□□ -1.52
USP28-202ENST00000535607 FOXL2NBQ6ZUU3 175 aa5.53□□□□□ -1.52
USP28-202ENST00000535607 PIP4P1Q86T03 277 aa5.53□□□□□ -1.52
USP28-202ENST00000535607 RTN4RL2Q86UN3 420 aa5.53□□□□□ -1.52
USP28-202ENST00000535607 ZNF441Q8N8Z8 693 aa5.53□□□□□ -1.52
USP28-202ENST00000535607 OR4C5Q8NGB2 326 aa5.53□□□□□ -1.52
USP28-202ENST00000535607 OR10G9Q8NGN4 311 aa5.53□□□□□ -1.52
USP28-202ENST00000535607 OR10G7Q8NGN6 311 aa5.53□□□□□ -1.52
USP28-202ENST00000535607 OR11L1Q8NGX0 322 aa5.53□□□□□ -1.52
USP28-202ENST00000535607 OR5P3Q8WZ94 311 aa5.53□□□□□ -1.52
USP28-202ENST00000535607 BORCS7Q96B45 105 aa5.53□□□□□ -1.52
USP28-202ENST00000535607 DNAJA3Q96EY1 480 aa5.53□□□□□ -1.52
USP28-202ENST00000535607 THOC3Q96J01 351 aaKnown RBP5.53□□□□□ -1.52
USP28-202ENST00000535607 SIGLEC12Q96PQ1 595 aa5.53□□□□□ -1.52
USP28-202ENST00000535607 HDHD3Q9BSH5 251 aaPredicted RBP5.53□□□□□ -1.52
USP28-202ENST00000535607 EMC6Q9BV81 110 aa5.53□□□□□ -1.52
USP28-202ENST00000535607 SLC7A10Q9NS82 523 aa5.53□□□□□ -1.52
USP28-202ENST00000535607 PLEK2Q9NYT0 353 aa5.53□□□□□ -1.52
USP28-202ENST00000535607 KLRF1Q9NZS2 232 aa5.53□□□□□ -1.52
USP28-202ENST00000535607 MRPS16Q9Y3D3 137 aaKnown RBP5.53□□□□□ -1.52
USP28-202ENST00000535607 RALGAPA1Q6GYQ0 2036 aa5.53□□□□□ -1.52
USP28-202ENST00000535607 GOLGA4Q13439 2230 aaKnown RBP5.52□□□□□ -1.53
USP28-202ENST00000535607 CABIN1Q9Y6J0 2220 aa5.52□□□□□ -1.53
USP28-202ENST00000535607 KNL1Q8NG31 2342 aa5.52□□□□□ -1.53
USP28-202ENST00000535607 IGLV3-32A0A0A0MS00 114 aa5.52□□□□□ -1.53
USP28-202ENST00000535607 IGKV1D-43A0A0B4J1Z2 117 aa5.52□□□□□ -1.53
USP28-202ENST00000535607 IGHV5-10-1A0A0J9YXX1 117 aa5.52□□□□□ -1.53
USP28-202ENST00000535607 ZNF816-ZNF321PA0A0X1KG74 233 aa5.52□□□□□ -1.53
USP28-202ENST00000535607 GJE1A6NN92 205 aa5.52□□□□□ -1.53
USP28-202ENST00000535607 C11orf94C9JXX5 98 aa5.52□□□□□ -1.53
USP28-202ENST00000535607 NPIPA2E9PIF3 369 aa5.52□□□□□ -1.53
USP28-202ENST00000535607 NPIPA3F8WFD2 350 aa5.52□□□□□ -1.53
USP28-202ENST00000535607 SIRPB1O00241 398 aa5.52□□□□□ -1.53
USP28-202ENST00000535607 SLC33A1O00400 549 aaPredicted RBP5.52□□□□□ -1.53
USP28-202ENST00000535607 TRAF3IP2O43734 574 aaPredicted RBP5.52□□□□□ -1.53
USP28-202ENST00000535607 WDR1O75083 606 aa5.52□□□□□ -1.53
USP28-202ENST00000535607 MPDU1O75352 247 aa5.52□□□□□ -1.53
USP28-202ENST00000535607 OR7C1O76099 320 aaPredicted RBP5.52□□□□□ -1.53
USP28-202ENST00000535607 OR5G3P0C626 314 aa5.52□□□□□ -1.53
USP28-202ENST00000535607 IGFBP2P18065 325 aa5.52□□□□□ -1.53
USP28-202ENST00000535607 GZMHP20718 246 aa5.52□□□□□ -1.53
USP28-202ENST00000535607 GCH1P30793 250 aa5.52□□□□□ -1.53
USP28-202ENST00000535607 OTX1P32242 354 aaPredicted RBP5.52□□□□□ -1.53
USP28-202ENST00000535607 CDAP32320 146 aa5.52□□□□□ -1.53
USP28-202ENST00000535607 FGF8P55075 233 aaPredicted RBP5.52□□□□□ -1.53
USP28-202ENST00000535607 PAX9P55771 341 aa5.52□□□□□ -1.53
USP28-202ENST00000535607 HTD2P86397 168 aa5.52□□□□□ -1.53
USP28-202ENST00000535607 NHLH1Q02575 133 aa5.52□□□□□ -1.53
USP28-202ENST00000535607 ZNF90Q03938 601 aa5.52□□□□□ -1.53
USP28-202ENST00000535607 TMEM267Q0VDI3 215 aaPredicted RBP5.52□□□□□ -1.53
USP28-202ENST00000535607 MORN2Q502X0 79 aa5.52□□□□□ -1.53
USP28-202ENST00000535607 OR10J3Q5JRS4 329 aa5.52□□□□□ -1.53
USP28-202ENST00000535607 PLCXD3Q63HM9 321 aa5.52□□□□□ -1.53
USP28-202ENST00000535607 RHBDD2Q6NTF9 364 aa5.52□□□□□ -1.53
USP28-202ENST00000535607 PCSK4Q6UW60 755 aa5.52□□□□□ -1.53
USP28-202ENST00000535607 Q6ZN92 141 aa5.52□□□□□ -1.53
USP28-202ENST00000535607 ZNF788Q6ZQV5 615 aa5.52□□□□□ -1.53
USP28-202ENST00000535607 MOB1BQ7L9L4 216 aa5.52□□□□□ -1.53
USP28-202ENST00000535607 TMEM144Q7Z5S9 345 aa5.52□□□□□ -1.53
USP28-202ENST00000535607 MKXQ8IYA7 352 aa5.52□□□□□ -1.53
USP28-202ENST00000535607 GCNT2Q8N0V5 402 aa5.52□□□□□ -1.53
USP28-202ENST00000535607 GAPTQ8N292 157 aa5.52□□□□□ -1.53
USP28-202ENST00000535607 ZNF321PQ8N8H1 164 aa5.52□□□□□ -1.53
USP28-202ENST00000535607 OR10P1Q8NGE3 313 aa5.52□□□□□ -1.53
USP28-202ENST00000535607 OR10G8Q8NGN5 311 aa5.52□□□□□ -1.53
USP28-202ENST00000535607 PLPPR1Q8TBJ4 325 aa5.52□□□□□ -1.53
USP28-202ENST00000535607 TMEM54Q969K7 222 aa5.52□□□□□ -1.53
USP28-202ENST00000535607 SFRP2Q96HF1 295 aa5.52□□□□□ -1.53
USP28-202ENST00000535607 LYZL4Q96KX0 146 aa5.52□□□□□ -1.53
USP28-202ENST00000535607 UHRF2Q96PU4 802 aa5.52□□□□□ -1.53
USP28-202ENST00000535607 HSPB9Q9BQS6 159 aa5.52□□□□□ -1.53
USP28-202ENST00000535607 RSG1Q9BU20 258 aa5.52□□□□□ -1.53
USP28-202ENST00000535607 LIME1Q9H400 295 aa5.52□□□□□ -1.53
USP28-202ENST00000535607 METTL7AQ9H8H3 244 aa5.52□□□□□ -1.53
USP28-202ENST00000535607 B3GAT1Q9P2W7 334 aa5.52□□□□□ -1.53
USP28-202ENST00000535607 LAMTOR2Q9Y2Q5 125 aa5.52□□□□□ -1.53
USP28-202ENST00000535607 PAM16Q9Y3D7 125 aa5.52□□□□□ -1.53
USP28-202ENST00000535607 LY96Q9Y6Y9 160 aa5.52□□□□□ -1.53
USP28-202ENST00000535607 COL27A1Q8IZC6 1860 aaPredicted RBP5.51□□□□□ -1.53
USP28-202ENST00000535607 DMXL1Q9Y485 3027 aa5.51□□□□□ -1.53
USP28-202ENST00000535607 TRBV6-6A0A0A6YYG2 114 aa5.51□□□□□ -1.53
USP28-202ENST00000535607 IGHV5-51A0A0C4DH38 117 aa5.51□□□□□ -1.53
USP28-202ENST00000535607 A0A1W2PPV4 95 aa5.51□□□□□ -1.53
USP28-202ENST00000535607 SLC22A20A6NK97 555 aa5.51□□□□□ -1.53
USP28-202ENST00000535607 K7ERU9 68 aa5.51□□□□□ -1.53
USP28-202ENST00000535607 MLNRO43193 412 aa5.51□□□□□ -1.53
USP28-202ENST00000535607 ZNF253O75346 499 aa5.51□□□□□ -1.53
USP28-202ENST00000535607 PGLYRP1O75594 196 aaPredicted RBP5.51□□□□□ -1.53
USP28-202ENST00000535607 PLAUP00749 431 aa5.51□□□□□ -1.53
USP28-202ENST00000535607 PPBPP02775 128 aa5.51□□□□□ -1.53
USP28-202ENST00000535607 CYC1P08574 325 aa5.51□□□□□ -1.53
USP28-202ENST00000535607 IL11P20809 199 aa5.51□□□□□ -1.53
USP28-202ENST00000535607 MDKP21741 143 aaPredicted RBP5.51□□□□□ -1.53
USP28-202ENST00000535607 GABRA2P47869 451 aa5.51□□□□□ -1.53
USP28-202ENST00000535607 THBS3P49746 956 aa5.51□□□□□ -1.53
USP28-202ENST00000535607 CLDN17P56750 224 aa5.51□□□□□ -1.53
USP28-202ENST00000535607 GNB2P62879 340 aa5.51□□□□□ -1.53
USP28-202ENST00000535607 CCL7P80098 99 aa5.51□□□□□ -1.53
USP28-202ENST00000535607 CFHR1Q03591 330 aa5.51□□□□□ -1.53
USP28-202ENST00000535607 IL11RAQ14626 422 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms