RNA–Protein interactions for RNA: ENST00000534771.1

COPB1-212, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-212ENST00000534771 FADS1O60427 444 aa-0.73□□□□□ -2.53
COPB1-212ENST00000534771 OR1I1O60431 355 aa-0.73□□□□□ -2.53
COPB1-212ENST00000534771 EPPINO95925 133 aa-0.73□□□□□ -2.53
COPB1-212ENST00000534771 ASAH2BP0C7U1 165 aa-0.73□□□□□ -2.53
COPB1-212ENST00000534771 METTL15P1P0C7V9 234 aa-0.73□□□□□ -2.53
COPB1-212ENST00000534771 GIMD1P0DJR0 217 aa-0.73□□□□□ -2.53
COPB1-212ENST00000534771 OR10J1P30954 320 aa-0.73□□□□□ -2.53
COPB1-212ENST00000534771 UGT2B10P36537 528 aa-0.73□□□□□ -2.53
COPB1-212ENST00000534771 CDK9P50750 372 aaKnown RBP-0.73□□□□□ -2.53
COPB1-212ENST00000534771 LINC00313P59037 77 aa-0.73□□□□□ -2.53
COPB1-212ENST00000534771 C1QTNF8P60827 252 aa-0.73□□□□□ -2.53
COPB1-212ENST00000534771 DSTNP60981 165 aa-0.73□□□□□ -2.53
COPB1-212ENST00000534771 PDE6HQ13956 83 aa-0.73□□□□□ -2.53
COPB1-212ENST00000534771 RESP18Q5W5W9 173 aa-0.73□□□□□ -2.53
COPB1-212ENST00000534771 SBSNQ6UWP8 590 aa-0.73□□□□□ -2.53
COPB1-212ENST00000534771 MRPL21Q7Z2W9 205 aaKnown RBP-0.73□□□□□ -2.53
COPB1-212ENST00000534771 PLCZ1Q86YW0 608 aa-0.73□□□□□ -2.53
COPB1-212ENST00000534771 BAP18Q8IXM2 172 aa-0.73□□□□□ -2.53
COPB1-212ENST00000534771 SPICQ8N5J4 248 aa-0.73□□□□□ -2.53
COPB1-212ENST00000534771 C3orf56Q8N813 242 aa-0.73□□□□□ -2.53
COPB1-212ENST00000534771 FBXO36Q8NEA4 188 aa-0.73□□□□□ -2.53
COPB1-212ENST00000534771 OR8G5Q8NG78 346 aa-0.73□□□□□ -2.53
COPB1-212ENST00000534771 OR51L1Q8NGJ5 315 aa-0.73□□□□□ -2.53
COPB1-212ENST00000534771 OR5K1Q8NHB7 308 aa-0.73□□□□□ -2.53
COPB1-212ENST00000534771 CDKL2Q92772 493 aa-0.73□□□□□ -2.53
COPB1-212ENST00000534771 RNASE6Q93091 150 aaKnown RBP-0.73□□□□□ -2.53
COPB1-212ENST00000534771 SFRP2Q96HF1 295 aa-0.73□□□□□ -2.53
COPB1-212ENST00000534771 PGLYRP3Q96LB9 341 aa-0.73□□□□□ -2.53
COPB1-212ENST00000534771 PLIN2Q99541 437 aa-0.73□□□□□ -2.53
COPB1-212ENST00000534771 BPIFA3Q9BQP9 254 aa-0.73□□□□□ -2.53
COPB1-212ENST00000534771 NT5C3AQ9H0P0 336 aa-0.73□□□□□ -2.53
COPB1-212ENST00000534771 TLNRD1Q9H1K6 362 aa-0.73□□□□□ -2.53
COPB1-212ENST00000534771 CDC42SE1Q9NRR8 79 aa-0.73□□□□□ -2.53
COPB1-212ENST00000534771 RASL12Q9NYN1 266 aa-0.73□□□□□ -2.53
COPB1-212ENST00000534771 BAIAP2Q9UQB8 552 aa-0.73□□□□□ -2.53
COPB1-212ENST00000534771 CITO14578 2027 aa-0.73□□□□□ -2.53
COPB1-212ENST00000534771 NBEAL2Q6ZNJ1 2754 aa-0.73□□□□□ -2.53
COPB1-212ENST00000534771 MED12LQ86YW9 2145 aa-0.73□□□□□ -2.53
COPB1-212ENST00000534771 NBPF19A0A087WUL8 3843 aa-0.73□□□□□ -2.53
COPB1-212ENST00000534771 AQRO60306 1485 aaKnown RBP eCLIP-0.73□□□□□ -2.533e-8■■■■□ 26.6
COPB1-212ENST00000534771 SNRNP200O75643 2136 aaKnown RBP-0.74□□□□□ -2.53
COPB1-212ENST00000534771 LOC285556D6RIA3 1793 aa-0.74□□□□□ -2.53
COPB1-212ENST00000534771 TRAV1-1A0A0B4J248 108 aa-0.74□□□□□ -2.53
COPB1-212ENST00000534771 MGAT4DA6NG13 374 aa-0.74□□□□□ -2.53
COPB1-212ENST00000534771 TVP23AA6NH52 213 aa-0.74□□□□□ -2.53
COPB1-212ENST00000534771 C2orf70A6NJV1 201 aa-0.74□□□□□ -2.53
COPB1-212ENST00000534771 CCL25O15444 150 aa-0.74□□□□□ -2.53
COPB1-212ENST00000534771 OR5F1O95221 314 aa-0.74□□□□□ -2.53
COPB1-212ENST00000534771 MSNP26038 577 aaKnown RBP-0.74□□□□□ -2.53
COPB1-212ENST00000534771 CCT6AP40227 531 aaKnown RBP-0.74□□□□□ -2.53
COPB1-212ENST00000534771 CA7P43166 264 aa-0.74□□□□□ -2.53
COPB1-212ENST00000534771 PSMD4P55036 377 aaKnown RBP-0.74□□□□□ -2.53
COPB1-212ENST00000534771 TBPL1P62380 186 aa-0.74□□□□□ -2.53
COPB1-212ENST00000534771 DYNLL1P63167 89 aaKnown RBP-0.74□□□□□ -2.53
COPB1-212ENST00000534771 DMTNQ08495 405 aa-0.74□□□□□ -2.53
COPB1-212ENST00000534771 NDUFAF6Q330K2 333 aa-0.74□□□□□ -2.53
COPB1-212ENST00000534771 CENPWQ5EE01 88 aa-0.74□□□□□ -2.53
COPB1-212ENST00000534771 ULK3Q6PHR2 472 aa-0.74□□□□□ -2.53
COPB1-212ENST00000534771 AAED1Q7RTV5 226 aa-0.74□□□□□ -2.53
COPB1-212ENST00000534771 C10orf67Q8IYJ2 551 aa-0.74□□□□□ -2.53
COPB1-212ENST00000534771 LINC00471Q8N535 108 aa-0.74□□□□□ -2.53
COPB1-212ENST00000534771 LINC00311Q8N616 119 aa-0.74□□□□□ -2.53
COPB1-212ENST00000534771 OR4K17Q8NGC6 315 aa-0.74□□□□□ -2.53
COPB1-212ENST00000534771 COMMD5Q9GZQ3 224 aa-0.74□□□□□ -2.53
COPB1-212ENST00000534771 OR2AG1Q9H205 316 aa-0.74□□□□□ -2.53
COPB1-212ENST00000534771 ACER3Q9NUN7 267 aa-0.74□□□□□ -2.53
COPB1-212ENST00000534771 VAPAQ9P0L0 249 aa-0.74□□□□□ -2.53
COPB1-212ENST00000534771 EXTL2Q9UBQ6 330 aa-0.74□□□□□ -2.53
COPB1-212ENST00000534771 CFAP45Q9UL16 551 aa-0.74□□□□□ -2.53
COPB1-212ENST00000534771 MXRA5Q9NR99 2828 aa-0.74□□□□□ -2.53
COPB1-212ENST00000534771 MED12Q93074 2177 aa-0.74□□□□□ -2.53
COPB1-212ENST00000534771 THSD7AQ9UPZ6 1657 aa-0.75□□□□□ -2.53
COPB1-212ENST00000534771 HUWE1Q7Z6Z7 4374 aaKnown RBP-0.75□□□□□ -2.53
COPB1-212ENST00000534771 DICER1Q9UPY3 1922 aaKnown RBP-0.75□□□□□ -2.53
COPB1-212ENST00000534771 NIPBLQ6KC79 2804 aaeCLIP-0.75□□□□□ -2.533e-11■■■■□ 20
COPB1-212ENST00000534771 BICDL2A1A5D9 508 aa-0.75□□□□□ -2.53
COPB1-212ENST00000534771 C5orf67F2Z3F1 127 aa-0.75□□□□□ -2.53
COPB1-212ENST00000534771 M0QYV0 167 aa-0.75□□□□□ -2.53
COPB1-212ENST00000534771 KCNK1O00180 336 aa-0.75□□□□□ -2.53
COPB1-212ENST00000534771 ENSAO43768 121 aaKnown RBP-0.75□□□□□ -2.53
COPB1-212ENST00000534771 SHOX2O60902 331 aaPredicted RBP-0.75□□□□□ -2.53
COPB1-212ENST00000534771 VAPBO95292 243 aa-0.75□□□□□ -2.53
COPB1-212ENST00000534771 RCVRNP35243 200 aa-0.75□□□□□ -2.53
COPB1-212ENST00000534771 RPA3P35244 121 aaPredicted RBP-0.75□□□□□ -2.53
COPB1-212ENST00000534771 RCN1Q15293 331 aa-0.75□□□□□ -2.53
COPB1-212ENST00000534771 TRIP13Q15645 432 aaPredicted RBP-0.75□□□□□ -2.53
COPB1-212ENST00000534771 HBMQ6B0K9 141 aa-0.75□□□□□ -2.53
COPB1-212ENST00000534771 LINC00322Q6ZN03 302 aaPredicted RBP-0.75□□□□□ -2.53
COPB1-212ENST00000534771 ZNF826PQ6ZT77 177 aa-0.75□□□□□ -2.53
COPB1-212ENST00000534771 OOSP2Q86WS3 158 aa-0.75□□□□□ -2.53
COPB1-212ENST00000534771 LRRC34Q8IZ02 419 aa-0.75□□□□□ -2.53
COPB1-212ENST00000534771 NATD1Q8N6N6 113 aa-0.75□□□□□ -2.53
COPB1-212ENST00000534771 OR10AC1Q8NH08 325 aa-0.75□□□□□ -2.53
COPB1-212ENST00000534771 OR2AE1Q8NHA4 323 aa-0.75□□□□□ -2.53
COPB1-212ENST00000534771 MITD1Q8WV92 249 aa-0.75□□□□□ -2.53
COPB1-212ENST00000534771 ACOT12Q8WYK0 555 aa-0.75□□□□□ -2.53
COPB1-212ENST00000534771 CPNE2Q96FN4 548 aaPredicted RBP-0.75□□□□□ -2.53
COPB1-212ENST00000534771 SLC50A1Q9BRV3 221 aa-0.75□□□□□ -2.53
COPB1-212ENST00000534771 OR51E2Q9H255 320 aa-0.75□□□□□ -2.53
COPB1-212ENST00000534771 OR51B6Q9H340 312 aa-0.75□□□□□ -2.53
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms