RNA–Protein interactions for RNA: ENST00000533482.5

RAD50-209, Transcript of RAD50 double strand break repair protein, humanhuman

TSL 1 (best)

Gene RAD50, Length 4,373 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAD50-209ENST00000533482 TRAV24A0A0B4J272 114 aa10.49□□□□□ -0.73
RAD50-209ENST00000533482 SRSF10O75494 262 aaKnown RBP10.49□□□□□ -0.73
RAD50-209ENST00000533482 CSN1S1P47710 185 aa10.49□□□□□ -0.73
RAD50-209ENST00000533482 RCC1LQ96I51 464 aaKnown RBP10.49□□□□□ -0.73
RAD50-209ENST00000533482 ZNF714Q96N38 554 aa10.49□□□□□ -0.73
RAD50-209ENST00000533482 TMEM140Q9NV12 185 aa10.49□□□□□ -0.73
RAD50-209ENST00000533482 TIMM9Q9Y5J7 89 aa10.49□□□□□ -0.73
RAD50-209ENST00000533482 K7N7A8 449 aa10.49□□□□□ -0.73
RAD50-209ENST00000533482 OR10J1P30954 320 aa10.49□□□□□ -0.73
RAD50-209ENST00000533482 OR1L4Q8NGR5 311 aa10.49□□□□□ -0.73
RAD50-209ENST00000533482 MALRD1Q5VYJ5 2156 aa10.49□□□□□ -0.73
RAD50-209ENST00000533482 ARF6P62330 175 aa10.49□□□□□ -0.73
RAD50-209ENST00000533482 OR4X1Q8NH49 305 aa10.49□□□□□ -0.73
RAD50-209ENST00000533482 SMIM8Q96KF7 97 aa10.49□□□□□ -0.73
RAD50-209ENST00000533482 TMUB1Q9BVT8 246 aa10.49□□□□□ -0.73
RAD50-209ENST00000533482 GPR61Q9BZJ8 451 aa10.49□□□□□ -0.73
RAD50-209ENST00000533482 NPVFQ9HCQ7 196 aa10.49□□□□□ -0.73
RAD50-209ENST00000533482 DBX1A6NMT0 343 aa10.48□□□□□ -0.73
RAD50-209ENST00000533482 PGA5P0DJD9 388 aa10.48□□□□□ -0.73
RAD50-209ENST00000533482 CCL20P78556 96 aa10.48□□□□□ -0.73
RAD50-209ENST00000533482 SRD5A3Q9H8P0 318 aa10.48□□□□□ -0.73
RAD50-209ENST00000533482 TECRQ9NZ01 308 aaKnown RBP10.48□□□□□ -0.73
RAD50-209ENST00000533482 PRNDQ9UKY0 176 aa10.48□□□□□ -0.73
RAD50-209ENST00000533482 RAXQ9Y2V3 346 aa10.48□□□□□ -0.73
RAD50-209ENST00000533482 PLXNB3Q9ULL4 1909 aa10.48□□□□□ -0.73
RAD50-209ENST00000533482 A0A1W2PN81 502 aa10.48□□□□□ -0.73
RAD50-209ENST00000533482 B4DEV8 164 aa10.48□□□□□ -0.73
RAD50-209ENST00000533482 GLRXP35754 106 aa10.48□□□□□ -0.73
RAD50-209ENST00000533482 TIMM23BQ5SRD1 257 aa10.48□□□□□ -0.73
RAD50-209ENST00000533482 BARX1Q9HBU1 254 aaPredicted RBP10.48□□□□□ -0.73
RAD50-209ENST00000533482 WFDC1Q9HC57 220 aa10.48□□□□□ -0.73
RAD50-209ENST00000533482 CD55P08174 381 aa10.48□□□□□ -0.73
RAD50-209ENST00000533482 RPL29P47914 159 aaKnown RBP10.48□□□□□ -0.73
RAD50-209ENST00000533482 SPCS3P61009 180 aa10.48□□□□□ -0.73
RAD50-209ENST00000533482 SFXN3Q9BWM7 321 aa10.48□□□□□ -0.73
RAD50-209ENST00000533482 C2orf16Q68DN1 1984 aa10.48□□□□□ -0.73
RAD50-209ENST00000533482 C20orf202A1L168 122 aa10.47□□□□□ -0.73
RAD50-209ENST00000533482 HOXB1P14653 301 aaPredicted RBP10.47□□□□□ -0.73
RAD50-209ENST00000533482 IER3P46695 156 aa10.47□□□□□ -0.73
RAD50-209ENST00000533482 UCNP55089 124 aa10.47□□□□□ -0.73
RAD50-209ENST00000533482 RANP62826 216 aaKnown RBP10.47□□□□□ -0.73
RAD50-209ENST00000533482 ZNF383Q8NA42 475 aa10.47□□□□□ -0.73
RAD50-209ENST00000533482 OR2T6Q8NHC8 308 aa10.47□□□□□ -0.73
RAD50-209ENST00000533482 HS3ST6Q96QI5 342 aa10.47□□□□□ -0.73
RAD50-209ENST00000533482 QTRT1Q9BXR0 403 aaKnown RBP10.47□□□□□ -0.73
RAD50-209ENST00000533482 TRAV34A0A0B4J273 112 aa10.47□□□□□ -0.73
RAD50-209ENST00000533482 HELTA6NFD8 242 aa10.47□□□□□ -0.73
RAD50-209ENST00000533482 GATCO43716 136 aaKnown RBP10.47□□□□□ -0.73
RAD50-209ENST00000533482 CD40P25942 277 aa10.47□□□□□ -0.73
RAD50-209ENST00000533482 GLRX5Q86SX6 157 aa10.47□□□□□ -0.73
RAD50-209ENST00000533482 OR1L8Q8NGR8 309 aa10.47□□□□□ -0.73
RAD50-209ENST00000533482 VSTM2AQ8TAG5 236 aa10.47□□□□□ -0.73
RAD50-209ENST00000533482 MEGF10Q96KG7 1140 aa10.47□□□□□ -0.73
RAD50-209ENST00000533482 WFIKKN1Q96NZ8 548 aa10.47□□□□□ -0.73
RAD50-209ENST00000533482 PLSCR2Q9NRY7 297 aa10.47□□□□□ -0.73
RAD50-209ENST00000533482 LAMA3Q16787 3333 aa10.47□□□□□ -0.73
RAD50-209ENST00000533482 SONP18583 2426 aaKnown RBP10.47□□□□□ -0.73
RAD50-209ENST00000533482 SLC25A17O43808 307 aa10.47□□□□□ -0.73
RAD50-209ENST00000533482 CRISP2P16562 243 aa10.47□□□□□ -0.73
RAD50-209ENST00000533482 AMTP48728 403 aa10.47□□□□□ -0.73
RAD50-209ENST00000533482 BSPH1Q075Z2 132 aa10.47□□□□□ -0.73
RAD50-209ENST00000533482 DHRS7BQ6IAN0 325 aaPredicted RBP10.47□□□□□ -0.73
RAD50-209ENST00000533482 REG4Q9BYZ8 158 aa10.47□□□□□ -0.73
RAD50-209ENST00000533482 CYTL1Q9NRR1 136 aa10.47□□□□□ -0.73
RAD50-209ENST00000533482 TCF19Q9Y242 345 aa10.47□□□□□ -0.73
RAD50-209ENST00000533482 IL18BPO95998 194 aa10.47□□□□□ -0.73
RAD50-209ENST00000533482 OR5I1Q13606 314 aa10.47□□□□□ -0.73
RAD50-209ENST00000533482 ACP7Q6ZNF0 438 aa10.47□□□□□ -0.73
RAD50-209ENST00000533482 SGK494Q96LW2 274 aa10.47□□□□□ -0.73
RAD50-209ENST00000533482 SMDT1Q9H4I9 107 aa10.47□□□□□ -0.73
RAD50-209ENST00000533482 SEBOXQ9HB31 216 aaPredicted RBP10.47□□□□□ -0.73
RAD50-209ENST00000533482 CARHSP1Q9Y2V2 147 aaKnown RBP10.47□□□□□ -0.73
RAD50-209ENST00000533482 SELLP14151 372 aa10.46□□□□□ -0.73
RAD50-209ENST00000533482 GPR6P46095 362 aaPredicted RBP10.46□□□□□ -0.73
RAD50-209ENST00000533482 B3GALT5-AS1P59052 145 aa10.46□□□□□ -0.73
RAD50-209ENST00000533482 LINC00518Q8N0U6 118 aa10.46□□□□□ -0.73
RAD50-209ENST00000533482 LSM10Q969L4 123 aaKnown RBP10.46□□□□□ -0.73
RAD50-209ENST00000533482 CYYR1Q96J86 154 aa10.46□□□□□ -0.73
RAD50-209ENST00000533482 PRRC2CQ9Y520 2896 aaKnown RBP10.46□□□□□ -0.74
RAD50-209ENST00000533482 C19orf67A6NJJ6 358 aa10.46□□□□□ -0.74
RAD50-209ENST00000533482 LYNX1G3V0Z9 82 aa10.46□□□□□ -0.74
RAD50-209ENST00000533482 ZNF253O75346 499 aa10.46□□□□□ -0.74
RAD50-209ENST00000533482 REG1AP05451 166 aa10.46□□□□□ -0.74
RAD50-209ENST00000533482 SMIM6P0DI80 62 aa10.46□□□□□ -0.74
RAD50-209ENST00000533482 LYNX1P0DP58 116 aa10.46□□□□□ -0.74
RAD50-209ENST00000533482 MPZP25189 248 aa10.46□□□□□ -0.74
RAD50-209ENST00000533482 TPPP2P59282 170 aa10.46□□□□□ -0.74
RAD50-209ENST00000533482 HIST3H3Q16695 136 aa10.46□□□□□ -0.74
RAD50-209ENST00000533482 MUC15Q8N387 334 aa10.46□□□□□ -0.74
RAD50-209ENST00000533482 EIF4E3Q8N5X7 224 aaKnown RBP10.46□□□□□ -0.74
RAD50-209ENST00000533482 WDR61Q9GZS3 305 aaKnown RBP10.46□□□□□ -0.74
RAD50-209ENST00000533482 PARD6AQ9NPB6 346 aa10.46□□□□□ -0.74
RAD50-209ENST00000533482 RAMP3O60896 148 aa10.46□□□□□ -0.74
RAD50-209ENST00000533482 CXorf1O96002 111 aa10.46□□□□□ -0.74
RAD50-209ENST00000533482 RNASEKQ6P5S7 137 aaKnown RBP10.46□□□□□ -0.74
RAD50-209ENST00000533482 TMEM167BQ9NRX6 74 aa10.46□□□□□ -0.74
RAD50-209ENST00000533482 MRPS18CQ9Y3D5 142 aaKnown RBP10.46□□□□□ -0.74
RAD50-209ENST00000533482 CCDC168Q8NDH2 2452 aa10.46□□□□□ -0.74
RAD50-209ENST00000533482 TRBV6-7A0A0A0MS04 114 aa10.45□□□□□ -0.74
RAD50-209ENST00000533482 CEACAM3P40198 252 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms