RNA–Protein interactions for RNA: ENST00000532918.4

COLCA1-203, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best)

Gene COLCA1, Length 5,366 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-203ENST00000532918 HCP5Q6MZN7 132 aa9.15□□□□□ -0.94
COLCA1-203ENST00000532918 LYZL2Q7Z4W2 148 aa9.15□□□□□ -0.94
COLCA1-203ENST00000532918 SCN3AQ9NY46 2000 aa9.15□□□□□ -0.94
COLCA1-203ENST00000532918 FAM90A26D6RGX4 464 aa9.15□□□□□ -0.94
COLCA1-203ENST00000532918 FAM74A3Q4VXF1 159 aa9.15□□□□□ -0.94
COLCA1-203ENST00000532918 SPATA45Q537H7 98 aa9.15□□□□□ -0.94
COLCA1-203ENST00000532918 C1orf100Q5SVJ3 147 aa9.15□□□□□ -0.94
COLCA1-203ENST00000532918 APC2O95996 2303 aa9.15□□□□□ -0.94
COLCA1-203ENST00000532918 BRWD1Q9NSI6 2320 aa9.15□□□□□ -0.94
COLCA1-203ENST00000532918 CABIN1Q9Y6J0 2220 aa9.15□□□□□ -0.94
COLCA1-203ENST00000532918 IGHV3OR16-12A0A075B7B8 117 aa9.15□□□□□ -0.94
COLCA1-203ENST00000532918 CLDN18P56856 261 aa9.15□□□□□ -0.94
COLCA1-203ENST00000532918 CYB5R2Q6BCY4 276 aa9.15□□□□□ -0.94
COLCA1-203ENST00000532918 ST6GALNAC3Q8NDV1 305 aa9.15□□□□□ -0.94
COLCA1-203ENST00000532918 BRCA1P38398 1863 aaKnown RBP9.15□□□□□ -0.94
COLCA1-203ENST00000532918 PMCHL1Q16048 86 aa9.15□□□□□ -0.95
COLCA1-203ENST00000532918 SAMD13Q5VXD3 122 aa9.15□□□□□ -0.95
COLCA1-203ENST00000532918 C10orf111Q8N326 155 aa9.15□□□□□ -0.95
COLCA1-203ENST00000532918 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.15□□□□□ -0.95
COLCA1-203ENST00000532918 TMEM140Q9NV12 185 aa9.15□□□□□ -0.95
COLCA1-203ENST00000532918 DMRT1Q9Y5R6 373 aa9.15□□□□□ -0.95
COLCA1-203ENST00000532918 LHX2P50458 406 aa9.14□□□□□ -0.95
COLCA1-203ENST00000532918 FGF8P55075 233 aaPredicted RBP9.14□□□□□ -0.95
COLCA1-203ENST00000532918 ACP7Q6ZNF0 438 aa9.14□□□□□ -0.95
COLCA1-203ENST00000532918 SH3BGRL3Q9H299 93 aa9.14□□□□□ -0.95
COLCA1-203ENST00000532918 RCC2Q9P258 522 aaKnown RBP9.14□□□□□ -0.95
COLCA1-203ENST00000532918 MIEN1Q9BRT3 115 aa9.14□□□□□ -0.95
COLCA1-203ENST00000532918 MARVELD1Q9BSK0 173 aa9.14□□□□□ -0.95
COLCA1-203ENST00000532918 VAX2Q9UIW0 290 aa9.14□□□□□ -0.95
COLCA1-203ENST00000532918 TUBD1Q9UJT1 453 aa9.14□□□□□ -0.95
COLCA1-203ENST00000532918 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP9.14□□□□□ -0.95
COLCA1-203ENST00000532918 SLC17A3O00476 420 aa9.14□□□□□ -0.95
COLCA1-203ENST00000532918 EFEMP2O95967 443 aa9.14□□□□□ -0.95
COLCA1-203ENST00000532918 SCTP09683 121 aa9.14□□□□□ -0.95
COLCA1-203ENST00000532918 PGA5P0DJD9 388 aa9.14□□□□□ -0.95
COLCA1-203ENST00000532918 VDAC2P45880 294 aaPredicted RBP9.14□□□□□ -0.95
COLCA1-203ENST00000532918 TCL1AP56279 114 aa9.14□□□□□ -0.95
COLCA1-203ENST00000532918 LGALSLQ3ZCW2 172 aaPredicted RBP9.14□□□□□ -0.95
COLCA1-203ENST00000532918 CFAP161Q6P656 301 aa9.14□□□□□ -0.95
COLCA1-203ENST00000532918 LINC00518Q8N0U6 118 aa9.14□□□□□ -0.95
COLCA1-203ENST00000532918 ADAD2Q8NCV1 583 aaKnown RBP9.14□□□□□ -0.95
COLCA1-203ENST00000532918 SNURFLB1AK76 121 aa9.14□□□□□ -0.95
COLCA1-203ENST00000532918 SRSF10O75494 262 aaKnown RBP9.14□□□□□ -0.95
COLCA1-203ENST00000532918 APCSP02743 223 aa9.14□□□□□ -0.95
COLCA1-203ENST00000532918 GNLYP22749 145 aa9.14□□□□□ -0.95
COLCA1-203ENST00000532918 WNT5AP41221 380 aa9.14□□□□□ -0.95
COLCA1-203ENST00000532918 ZNF880Q6PDB4 577 aa9.14□□□□□ -0.95
COLCA1-203ENST00000532918 MIA3Q5JRA6 1907 aa9.14□□□□□ -0.95
COLCA1-203ENST00000532918 TGIF2-C20orf24A0A0A6YYL0 155 aa9.13□□□□□ -0.95
COLCA1-203ENST00000532918 KBTBD11O94819 623 aa9.13□□□□□ -0.95
COLCA1-203ENST00000532918 LINC00869P0C866 280 aa9.13□□□□□ -0.95
COLCA1-203ENST00000532918 GLIPR1P48060 266 aa9.13□□□□□ -0.95
COLCA1-203ENST00000532918 RELBQ01201 579 aa9.13□□□□□ -0.95
COLCA1-203ENST00000532918 PRSS53Q2L4Q9 553 aa9.13□□□□□ -0.95
COLCA1-203ENST00000532918 TMEM255AQ5JRV8 349 aa9.13□□□□□ -0.95
COLCA1-203ENST00000532918 AQP3Q92482 292 aa9.13□□□□□ -0.95
COLCA1-203ENST00000532918 DOCK3Q8IZD9 2030 aa9.13□□□□□ -0.95
COLCA1-203ENST00000532918 KIF13BQ9NQT8 1826 aa9.13□□□□□ -0.95
COLCA1-203ENST00000532918 RNF224P0DH78 156 aa9.13□□□□□ -0.95
COLCA1-203ENST00000532918 H7C2G1 150 aa9.13□□□□□ -0.95
COLCA1-203ENST00000532918 FAM3BP58499 235 aaPredicted RBP9.13□□□□□ -0.95
COLCA1-203ENST00000532918 C19orf54Q5BKX5 351 aa9.13□□□□□ -0.95
COLCA1-203ENST00000532918 TMEM91Q6ZNR0 172 aa9.13□□□□□ -0.95
COLCA1-203ENST00000532918 POC1AQ8NBT0 407 aa9.13□□□□□ -0.95
COLCA1-203ENST00000532918 TMEM222Q9H0R3 208 aa9.13□□□□□ -0.95
COLCA1-203ENST00000532918 A0A0G2JMM0 328 aa9.13□□□□□ -0.95
COLCA1-203ENST00000532918 A0A1W2PPB8 328 aa9.13□□□□□ -0.95
COLCA1-203ENST00000532918 A0A1W2PRS3 328 aa9.13□□□□□ -0.95
COLCA1-203ENST00000532918 KIR3DP1A8MWS1 328 aa9.13□□□□□ -0.95
COLCA1-203ENST00000532918 IQCF6A8MYZ5 107 aa9.13□□□□□ -0.95
COLCA1-203ENST00000532918 PITX3O75364 302 aa9.13□□□□□ -0.95
COLCA1-203ENST00000532918 VSIG10L2P0DP72 767 aa9.13□□□□□ -0.95
COLCA1-203ENST00000532918 RND2P52198 227 aa9.13□□□□□ -0.95
COLCA1-203ENST00000532918 G6PC2Q9NQR9 355 aa9.13□□□□□ -0.95
COLCA1-203ENST00000532918 IER3P46695 156 aa9.13□□□□□ -0.95
COLCA1-203ENST00000532918 SERF2P84101 59 aa9.13□□□□□ -0.95
COLCA1-203ENST00000532918 ZNF146Q15072 292 aa9.13□□□□□ -0.95
COLCA1-203ENST00000532918 MRPL54Q6P161 138 aaKnown RBP9.13□□□□□ -0.95
COLCA1-203ENST00000532918 OSR1Q8TAX0 266 aaPredicted RBP9.13□□□□□ -0.95
COLCA1-203ENST00000532918 C11orf68Q9H3H3 251 aaKnown RBP9.13□□□□□ -0.95
COLCA1-203ENST00000532918 CDC42EP3Q9UKI2 254 aa9.13□□□□□ -0.95
COLCA1-203ENST00000532918 TMEM189A5PLL7 270 aa9.12□□□□□ -0.95
COLCA1-203ENST00000532918 FCGR2BP31994 310 aaPredicted RBP9.12□□□□□ -0.95
COLCA1-203ENST00000532918 SLC25A34Q6PIV7 304 aa9.12□□□□□ -0.95
COLCA1-203ENST00000532918 PRNTQ86SH4 94 aa9.12□□□□□ -0.95
COLCA1-203ENST00000532918 WDFY1Q8IWB7 410 aa9.12□□□□□ -0.95
COLCA1-203ENST00000532918 SSC4DQ8WTU2 575 aa9.12□□□□□ -0.95
COLCA1-203ENST00000532918 HSPB9Q9BQS6 159 aa9.12□□□□□ -0.95
COLCA1-203ENST00000532918 TXNDC17Q9BRA2 123 aa9.12□□□□□ -0.95
COLCA1-203ENST00000532918 ZG16O60844 167 aa9.12□□□□□ -0.95
COLCA1-203ENST00000532918 RPS20P60866 119 aaKnown RBP9.12□□□□□ -0.95
COLCA1-203ENST00000532918 DMRTA1Q5VZB9 504 aa9.12□□□□□ -0.95
COLCA1-203ENST00000532918 TMEM136Q6ZRR5 245 aa9.12□□□□□ -0.95
COLCA1-203ENST00000532918 OVCH2Q7RTZ1 564 aa9.12□□□□□ -0.95
COLCA1-203ENST00000532918 TMEM183AQ8IXX5 376 aa9.12□□□□□ -0.95
COLCA1-203ENST00000532918 LINC00469Q8N7U9 141 aa9.12□□□□□ -0.95
COLCA1-203ENST00000532918 EAF1Q96JC9 268 aaPredicted RBP9.12□□□□□ -0.95
COLCA1-203ENST00000532918 Q96M66 194 aa9.12□□□□□ -0.95
COLCA1-203ENST00000532918 ALX4Q9H161 411 aaPredicted RBP9.12□□□□□ -0.95
COLCA1-203ENST00000532918 LINC00312Q9Y6C7 94 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms