RNA–Protein interactions for RNA: ENST00000532877.1

COL16A1-217, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 5

Gene COL16A1, Length 534 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-217ENST00000532877 C7orf66A4D0T2 115 aa11.44□□□□□ -0.58
COL16A1-217ENST00000532877 SNRPGP15A8MWD9 76 aa11.44□□□□□ -0.58
COL16A1-217ENST00000532877 SHOXO15266 292 aa11.44□□□□□ -0.58
COL16A1-217ENST00000532877 CREBL2O60519 120 aaPredicted RBP11.44□□□□□ -0.58
COL16A1-217ENST00000532877 CDS2O95674 445 aa11.44□□□□□ -0.58
COL16A1-217ENST00000532877 TMEM11P17152 192 aa11.44□□□□□ -0.58
COL16A1-217ENST00000532877 IER3P46695 156 aa11.44□□□□□ -0.58
COL16A1-217ENST00000532877 RPS16P62249 146 aaKnown RBP11.44□□□□□ -0.58
COL16A1-217ENST00000532877 TMEM268Q5VZI3 342 aa11.44□□□□□ -0.58
COL16A1-217ENST00000532877 Q8N6K4 173 aa11.44□□□□□ -0.58
COL16A1-217ENST00000532877 OSR1Q8TAX0 266 aaPredicted RBP11.44□□□□□ -0.58
COL16A1-217ENST00000532877 MITD1Q8WV92 249 aa11.44□□□□□ -0.58
COL16A1-217ENST00000532877 TMEM158Q8WZ71 300 aa11.44□□□□□ -0.58
COL16A1-217ENST00000532877 RBPMSQ93062 196 aaKnown RBP11.44□□□□□ -0.58
COL16A1-217ENST00000532877 TCF19Q9Y242 345 aa11.44□□□□□ -0.58
COL16A1-217ENST00000532877 MARCH11A6NNE9 402 aa11.43□□□□□ -0.58
COL16A1-217ENST00000532877 SRRM4A7MD48 611 aaKnown RBP11.43□□□□□ -0.58
COL16A1-217ENST00000532877 IGLV2-23P01705 113 aa11.43□□□□□ -0.58
COL16A1-217ENST00000532877 CNTFRP26992 372 aa11.43□□□□□ -0.58
COL16A1-217ENST00000532877 HNF4GQ14541 408 aa11.43□□□□□ -0.58
COL16A1-217ENST00000532877 LIN54Q6MZP7 749 aa11.43□□□□□ -0.58
COL16A1-217ENST00000532877 Q6ZNX1 250 aa11.43□□□□□ -0.58
COL16A1-217ENST00000532877 ZNF695Q8IW36 515 aa11.43□□□□□ -0.58
COL16A1-217ENST00000532877 SELENOHQ8IZQ5 122 aaKnown RBP11.43□□□□□ -0.58
COL16A1-217ENST00000532877 VKORC1L1Q8N0U8 176 aa11.43□□□□□ -0.58
COL16A1-217ENST00000532877 LGI3Q8N145 548 aa11.43□□□□□ -0.58
COL16A1-217ENST00000532877 LRTM2Q8N967 370 aa11.43□□□□□ -0.58
COL16A1-217ENST00000532877 OR5R1Q8NH85 324 aa11.43□□□□□ -0.58
COL16A1-217ENST00000532877 COQ8AQ8NI60 647 aa11.43□□□□□ -0.58
COL16A1-217ENST00000532877 SSMEM1Q8WWF3 244 aa11.43□□□□□ -0.58
COL16A1-217ENST00000532877 IL22RA2Q969J5 263 aa11.43□□□□□ -0.58
COL16A1-217ENST00000532877 R3HDM4Q96D70 268 aa11.43□□□□□ -0.58
COL16A1-217ENST00000532877 PHB2Q99623 299 aa11.43□□□□□ -0.58
COL16A1-217ENST00000532877 RNF5Q99942 180 aa11.43□□□□□ -0.58
COL16A1-217ENST00000532877 A0A0B4J2A0 478 aa11.42□□□□□ -0.58
COL16A1-217ENST00000532877 A6NDX4 124 aa11.42□□□□□ -0.58
COL16A1-217ENST00000532877 HOXA3O43365 443 aaPredicted RBP11.42□□□□□ -0.58
COL16A1-217ENST00000532877 WIPF1O43516 503 aa11.42□□□□□ -0.58
COL16A1-217ENST00000532877 HRASP01112 189 aa11.42□□□□□ -0.58
COL16A1-217ENST00000532877 IGKV1-5P01602 117 aa11.42□□□□□ -0.58
COL16A1-217ENST00000532877 NQO2P16083 231 aa11.42□□□□□ -0.58
COL16A1-217ENST00000532877 G6PCP35575 357 aa11.42□□□□□ -0.58
COL16A1-217ENST00000532877 LGALS7P47929 136 aa11.42□□□□□ -0.58
COL16A1-217ENST00000532877 MMDQ15546 238 aa11.42□□□□□ -0.58
COL16A1-217ENST00000532877 LY6EQ16553 131 aa11.42□□□□□ -0.58
COL16A1-217ENST00000532877 TMEM219Q86XT9 240 aa11.42□□□□□ -0.58
COL16A1-217ENST00000532877 C12orf45Q8N5I9 185 aaPredicted RBP11.42□□□□□ -0.58
COL16A1-217ENST00000532877 SLC35G3Q8N808 338 aa11.42□□□□□ -0.58
COL16A1-217ENST00000532877 SEC22AQ96IW7 307 aa11.42□□□□□ -0.58
COL16A1-217ENST00000532877 RHOVQ96L33 236 aa11.42□□□□□ -0.58
COL16A1-217ENST00000532877 TSNAXQ99598 290 aaKnown RBP11.42□□□□□ -0.58
COL16A1-217ENST00000532877 OR51J1Q9H342 316 aa11.42□□□□□ -0.58
COL16A1-217ENST00000532877 SHPKQ9UHJ6 478 aa11.42□□□□□ -0.58
COL16A1-217ENST00000532877 BTBD17A6NE02 478 aa11.41□□□□□ -0.58
COL16A1-217ENST00000532877 DBX1A6NMT0 343 aa11.41□□□□□ -0.58
COL16A1-217ENST00000532877 NBR2O15453 112 aa11.41□□□□□ -0.58
COL16A1-217ENST00000532877 OR2F2O95006 317 aa11.41□□□□□ -0.58
COL16A1-217ENST00000532877 SPDEFO95238 335 aa11.41□□□□□ -0.58
COL16A1-217ENST00000532877 KRASP01116 189 aa11.41□□□□□ -0.58
COL16A1-217ENST00000532877 FAM157CP0CG43 387 aa11.41□□□□□ -0.58
COL16A1-217ENST00000532877 SAA1P0DJI8 122 aaPredicted RBP11.41□□□□□ -0.58
COL16A1-217ENST00000532877 AKR1C2P52895 323 aa11.41□□□□□ -0.58
COL16A1-217ENST00000532877 F2RL1P55085 397 aa11.41□□□□□ -0.58
COL16A1-217ENST00000532877 ERVK-16P61578 105 aa11.41□□□□□ -0.58
COL16A1-217ENST00000532877 POU2AF1Q16633 256 aa11.41□□□□□ -0.58
COL16A1-217ENST00000532877 RBMS3Q6XE24 437 aaKnown RBP11.41□□□□□ -0.58
COL16A1-217ENST00000532877 SSX9Q7RTT3 188 aa11.41□□□□□ -0.58
COL16A1-217ENST00000532877 LYZL2Q7Z4W2 148 aa11.41□□□□□ -0.58
COL16A1-217ENST00000532877 DMBX1Q8NFW5 382 aa11.41□□□□□ -0.58
COL16A1-217ENST00000532877 NPBQ8NG41 125 aa11.41□□□□□ -0.58
COL16A1-217ENST00000532877 SLC25A33Q9BSK2 321 aa11.41□□□□□ -0.58
COL16A1-217ENST00000532877 PITPNC1Q9UKF7 332 aa11.41□□□□□ -0.58
COL16A1-217ENST00000532877 VPREB3Q9UKI3 123 aa11.41□□□□□ -0.58
COL16A1-217ENST00000532877 PIGBOS1A0A0B4J2F0 54 aa11.4□□□□□ -0.58
COL16A1-217ENST00000532877 A0A0G2JRQ6 117 aa11.4□□□□□ -0.58
COL16A1-217ENST00000532877 DUXBA0A1W2PPF3 345 aa11.4□□□□□ -0.58
COL16A1-217ENST00000532877 SSNA1O43805 119 aa11.4□□□□□ -0.58
COL16A1-217ENST00000532877 SLC25A17O43808 307 aa11.4□□□□□ -0.58
COL16A1-217ENST00000532877 ATG12O94817 140 aa11.4□□□□□ -0.58
COL16A1-217ENST00000532877 NDUFA3O95167 84 aa11.4□□□□□ -0.58
COL16A1-217ENST00000532877 P0C879 139 aa11.4□□□□□ -0.58
COL16A1-217ENST00000532877 VDAC1P21796 283 aa11.4□□□□□ -0.58
COL16A1-217ENST00000532877 UBE2KP61086 200 aa11.4□□□□□ -0.58
COL16A1-217ENST00000532877 PSG5Q15238 335 aa11.4□□□□□ -0.58
COL16A1-217ENST00000532877 VMA21Q3ZAQ7 101 aa11.4□□□□□ -0.58
COL16A1-217ENST00000532877 OR4A47Q6IF82 309 aa11.4□□□□□ -0.58
COL16A1-217ENST00000532877 PUSL1Q8N0Z8 303 aaKnown RBP11.4□□□□□ -0.58
COL16A1-217ENST00000532877 TMEM86BQ8N661 226 aa11.4□□□□□ -0.58
COL16A1-217ENST00000532877 UXS1Q8NBZ7 420 aa11.4□□□□□ -0.58
COL16A1-217ENST00000532877 OR8H1Q8NGG4 311 aa11.4□□□□□ -0.58
COL16A1-217ENST00000532877 RNASE11Q8TAA1 199 aaKnown RBP11.4□□□□□ -0.58
COL16A1-217ENST00000532877 RBM14Q96PK6 669 aaKnown RBP11.4□□□□□ -0.58
COL16A1-217ENST00000532877 AIFM2Q9BRQ8 373 aa11.4□□□□□ -0.58
COL16A1-217ENST00000532877 TPSG1Q9NRR2 321 aa11.4□□□□□ -0.58
COL16A1-217ENST00000532877 PLSCR3Q9NRY6 295 aa11.4□□□□□ -0.58
COL16A1-217ENST00000532877 TNFRSF19Q9NS68 423 aa11.4□□□□□ -0.58
COL16A1-217ENST00000532877 TMEM140Q9NV12 185 aa11.4□□□□□ -0.58
COL16A1-217ENST00000532877 POMT1Q9Y6A1 747 aa11.4□□□□□ -0.58
COL16A1-217ENST00000532877 TNCP24821 2201 aa11.39□□□□□ -0.59
COL16A1-217ENST00000532877 DNAJC9-AS1A6NH13 148 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms