RNA–Protein interactions for RNA: ENST00000532540.5

TGFBR3-209, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 1 (best)

Gene TGFBR3, Length 3,913 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-209ENST00000532540 C17orf82Q86X59 251 aaPredicted RBP5.81□□□□□ -1.48
TGFBR3-209ENST00000532540 SPACA3Q8IXA5 215 aa5.81□□□□□ -1.48
TGFBR3-209ENST00000532540 MKXQ8IYA7 352 aa5.81□□□□□ -1.48
TGFBR3-209ENST00000532540 FAM19A2Q8N3H0 131 aa5.81□□□□□ -1.48
TGFBR3-209ENST00000532540 OR5A1Q8NGJ0 315 aa5.81□□□□□ -1.48
TGFBR3-209ENST00000532540 OR1B1Q8NGR6 318 aa5.81□□□□□ -1.48
TGFBR3-209ENST00000532540 SPACA9Q96E40 222 aaPredicted RBP5.81□□□□□ -1.48
TGFBR3-209ENST00000532540 RBM24Q9BX46 236 aaKnown RBP5.81□□□□□ -1.48
TGFBR3-209ENST00000532540 CHODLQ9H9P2 273 aa5.81□□□□□ -1.48
TGFBR3-209ENST00000532540 SAP30LQ9HAJ7 183 aa5.81□□□□□ -1.48
TGFBR3-209ENST00000532540 TAAR3PQ9P1P4 343 aa5.81□□□□□ -1.48
TGFBR3-209ENST00000532540 A0A1B0GUS0 222 aa5.81□□□□□ -1.48
TGFBR3-209ENST00000532540 SERTM2A0A1B0GWG4 89 aa5.81□□□□□ -1.48
TGFBR3-209ENST00000532540 OR4C46A6NHA9 309 aa5.81□□□□□ -1.48
TGFBR3-209ENST00000532540 SLC17A3O00476 420 aa5.81□□□□□ -1.48
TGFBR3-209ENST00000532540 HSPB6O14558 160 aa5.81□□□□□ -1.48
TGFBR3-209ENST00000532540 ZNF324O75467 553 aaPredicted RBP5.81□□□□□ -1.48
TGFBR3-209ENST00000532540 CNIH1O95406 144 aa5.81□□□□□ -1.48
TGFBR3-209ENST00000532540 FAHP16930 419 aa5.81□□□□□ -1.48
TGFBR3-209ENST00000532540 CAMPP49913 170 aa5.81□□□□□ -1.48
TGFBR3-209ENST00000532540 EDDM3BP56851 147 aa5.81□□□□□ -1.48
TGFBR3-209ENST00000532540 SLC35B1P78383 322 aa5.81□□□□□ -1.48
TGFBR3-209ENST00000532540 MGAT2Q10469 447 aa5.81□□□□□ -1.48
TGFBR3-209ENST00000532540 CATR1Q13166 79 aa5.81□□□□□ -1.48
TGFBR3-209ENST00000532540 CD226Q15762 336 aa5.81□□□□□ -1.48
TGFBR3-209ENST00000532540 Q6ZWC4 215 aa5.81□□□□□ -1.48
TGFBR3-209ENST00000532540 C11orf40Q8WZ69 217 aa5.81□□□□□ -1.48
TGFBR3-209ENST00000532540 PIGCQ92535 297 aa5.81□□□□□ -1.48
TGFBR3-209ENST00000532540 ABHD17AQ96GS6 310 aa5.81□□□□□ -1.48
TGFBR3-209ENST00000532540 TMEM70Q9BUB7 260 aa5.81□□□□□ -1.48
TGFBR3-209ENST00000532540 HINT2Q9BX68 163 aa5.81□□□□□ -1.48
TGFBR3-209ENST00000532540 QTRT1Q9BXR0 403 aaKnown RBP5.81□□□□□ -1.48
TGFBR3-209ENST00000532540 PXMP4Q9Y6I8 212 aa5.81□□□□□ -1.48
TGFBR3-209ENST00000532540 MYLKQ15746 1914 aa5.81□□□□□ -1.48
TGFBR3-209ENST00000532540 A0A1W2PNU3 283 aaPredicted RBP5.81□□□□□ -1.48
TGFBR3-209ENST00000532540 OR2T8A6NH00 312 aa5.81□□□□□ -1.48
TGFBR3-209ENST00000532540 TSPAN2O60636 221 aa5.81□□□□□ -1.48
TGFBR3-209ENST00000532540 LMX1BO60663 402 aa5.81□□□□□ -1.48
TGFBR3-209ENST00000532540 NGFRP08138 427 aa5.81□□□□□ -1.48
TGFBR3-209ENST00000532540 RAB9AP51151 201 aa5.81□□□□□ -1.48
TGFBR3-209ENST00000532540 FUT6P51993 359 aa5.81□□□□□ -1.48
TGFBR3-209ENST00000532540 ZNF766Q5HY98 468 aa5.81□□□□□ -1.48
TGFBR3-209ENST00000532540 PPP1R32Q7Z5V6 425 aa5.81□□□□□ -1.48
TGFBR3-209ENST00000532540 C20orf196Q8IYI0 205 aa5.81□□□□□ -1.48
TGFBR3-209ENST00000532540 OR10AG1Q8NH19 301 aa5.81□□□□□ -1.48
TGFBR3-209ENST00000532540 TAF15Q92804 592 aaKnown RBP eCLIP5.81□□□□□ -1.48
TGFBR3-209ENST00000532540 OR4C12Q96R67 309 aa5.81□□□□□ -1.48
TGFBR3-209ENST00000532540 PMCHL2Q9BQD1 86 aa5.81□□□□□ -1.48
TGFBR3-209ENST00000532540 HDHD3Q9BSH5 251 aaPredicted RBP5.81□□□□□ -1.48
TGFBR3-209ENST00000532540 TMEM222Q9H0R3 208 aa5.81□□□□□ -1.48
TGFBR3-209ENST00000532540 ELOVL5Q9NYP7 299 aa5.81□□□□□ -1.48
TGFBR3-209ENST00000532540 DMXL2Q8TDJ6 3036 aa5.81□□□□□ -1.48
TGFBR3-209ENST00000532540 TRAV9-1A0A075B6T8 112 aa5.8□□□□□ -1.48
TGFBR3-209ENST00000532540 TUSC2O75896 110 aa5.8□□□□□ -1.48
TGFBR3-209ENST00000532540 ISG15P05161 165 aa5.8□□□□□ -1.48
TGFBR3-209ENST00000532540 OR5AL1P0C617 328 aa5.8□□□□□ -1.48
TGFBR3-209ENST00000532540 EGR1P18146 543 aa5.8□□□□□ -1.48
TGFBR3-209ENST00000532540 WT1P19544 449 aaPredicted RBP5.8□□□□□ -1.48
TGFBR3-209ENST00000532540 MAGEA5P43359 124 aa5.8□□□□□ -1.48
TGFBR3-209ENST00000532540 PRAMEF5Q5TYX0 476 aa5.8□□□□□ -1.48
TGFBR3-209ENST00000532540 PRAMEF6Q5VXH4 476 aa5.8□□□□□ -1.48
TGFBR3-209ENST00000532540 FAM71F2Q6NXP2 309 aa5.8□□□□□ -1.48
TGFBR3-209ENST00000532540 H1FNTQ75WM6 255 aaPredicted RBP5.8□□□□□ -1.48
TGFBR3-209ENST00000532540 MMD2Q8IY49 270 aa5.8□□□□□ -1.48
TGFBR3-209ENST00000532540 APOBEC3DQ96AK3 386 aaPredicted RBP5.8□□□□□ -1.48
TGFBR3-209ENST00000532540 TXNDC17Q9BRA2 123 aa5.8□□□□□ -1.48
TGFBR3-209ENST00000532540 HEYLQ9NQ87 328 aaPredicted RBP5.8□□□□□ -1.48
TGFBR3-209ENST00000532540 TRAPPC2LQ9UL33 140 aa5.8□□□□□ -1.48
TGFBR3-209ENST00000532540 BOKQ9UMX3 212 aaPredicted RBP5.8□□□□□ -1.48
TGFBR3-209ENST00000532540 RFNGQ9Y644 331 aa5.8□□□□□ -1.48
TGFBR3-209ENST00000532540 KLRC4-KLRK1H3BQV0 150 aa5.8□□□□□ -1.48
TGFBR3-209ENST00000532540 SLC25A17O43808 307 aa5.8□□□□□ -1.48
TGFBR3-209ENST00000532540 CXCL13O43927 109 aa5.8□□□□□ -1.48
TGFBR3-209ENST00000532540 MMP23AO75900 390 aa5.8□□□□□ -1.48
TGFBR3-209ENST00000532540 LEPROTL1O95214 131 aa5.8□□□□□ -1.48
TGFBR3-209ENST00000532540 ZNF788Q6ZQV5 615 aa5.8□□□□□ -1.48
TGFBR3-209ENST00000532540 OR8B2Q96RD0 313 aa5.8□□□□□ -1.48
TGFBR3-209ENST00000532540 FAM173AQ9BQD7 235 aa5.8□□□□□ -1.48
TGFBR3-209ENST00000532540 LIN7CQ9NUP9 197 aaKnown RBP5.8□□□□□ -1.48
TGFBR3-209ENST00000532540 PRR19A6NJB7 356 aa5.8□□□□□ -1.48
TGFBR3-209ENST00000532540 PLPP3O14495 311 aa5.8□□□□□ -1.48
TGFBR3-209ENST00000532540 CD5LO43866 347 aa5.8□□□□□ -1.48
TGFBR3-209ENST00000532540 KLF7O75840 302 aaPredicted RBP5.8□□□□□ -1.48
TGFBR3-209ENST00000532540 IL18BPO95998 194 aa5.8□□□□□ -1.48
TGFBR3-209ENST00000532540 ADH4P08319 380 aa5.8□□□□□ -1.48
TGFBR3-209ENST00000532540 FAM166AQ6J272 317 aa5.8□□□□□ -1.48
TGFBR3-209ENST00000532540 SSX8Q7RTT4 187 aa5.8□□□□□ -1.48
TGFBR3-209ENST00000532540 OSR2Q8N2R0 312 aa5.8□□□□□ -1.48
TGFBR3-209ENST00000532540 TMEM178AQ8NBL3 297 aa5.8□□□□□ -1.48
TGFBR3-209ENST00000532540 MBD3L1Q8WWY6 194 aa5.8□□□□□ -1.48
TGFBR3-209ENST00000532540 CLUHP3Q96NS8 147 aa5.8□□□□□ -1.48
TGFBR3-209ENST00000532540 ST20Q9HBF5 79 aa5.8□□□□□ -1.48
TGFBR3-209ENST00000532540 MED29Q9NX70 200 aa5.8□□□□□ -1.48
TGFBR3-209ENST00000532540 TLN2Q9Y4G6 2542 aa5.8□□□□□ -1.48
TGFBR3-209ENST00000532540 SELENOKQ9Y6D0 94 aa5.8□□□□□ -1.48
TGFBR3-209ENST00000532540 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP5.8□□□□□ -1.488e-8■■■■□ 21.1
TGFBR3-209ENST00000532540 IGHV3-64DA0A0J9YX35 117 aa5.8□□□□□ -1.48
TGFBR3-209ENST00000532540 LILRA1O75019 489 aa5.8□□□□□ -1.48
TGFBR3-209ENST00000532540 CA1P00915 261 aaPredicted RBP5.8□□□□□ -1.48
TGFBR3-209ENST00000532540 IGKV1D-16P01601 117 aa5.8□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms