RNA–Protein interactions for RNA: ENST00000531551.5

CTSB-222, Transcript of cathepsin B, humanhuman

TSL 1 (best)

Gene CTSB, Length 1,855 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-222ENST00000531551 LIAT1Q6ZQX7 453 aa14.1□□□□□ -0.15
CTSB-222ENST00000531551 RNASE11Q8TAA1 199 aaKnown RBP14.1□□□□□ -0.15
CTSB-222ENST00000531551 R3HDM4Q96D70 268 aa14.1□□□□□ -0.15
CTSB-222ENST00000531551 TSNAXQ99598 290 aaKnown RBP14.1□□□□□ -0.15
CTSB-222ENST00000531551 ESM1Q9NQ30 184 aa14.1□□□□□ -0.15
CTSB-222ENST00000531551 KIAA1456Q9P272 454 aa14.1□□□□□ -0.15
CTSB-222ENST00000531551 POMT1Q9Y6A1 747 aa14.1□□□□□ -0.15
CTSB-222ENST00000531551 SLC25A17O43808 307 aa14.1□□□□□ -0.15
CTSB-222ENST00000531551 CDS2O95674 445 aa14.1□□□□□ -0.15
CTSB-222ENST00000531551 IGKV1-39P01597 117 aa14.1□□□□□ -0.15
CTSB-222ENST00000531551 IGKV1D-39P04432 117 aa14.1□□□□□ -0.15
CTSB-222ENST00000531551 NQO2P16083 231 aa14.1□□□□□ -0.15
CTSB-222ENST00000531551 LGALS7P47929 136 aa14.1□□□□□ -0.15
CTSB-222ENST00000531551 ERVK-16P61578 105 aa14.1□□□□□ -0.15
CTSB-222ENST00000531551 ANKRD55Q3KP44 614 aa14.1□□□□□ -0.15
CTSB-222ENST00000531551 Q8N6K4 173 aa14.1□□□□□ -0.15
CTSB-222ENST00000531551 MINDY2Q8NBR6 621 aa14.1□□□□□ -0.15
CTSB-222ENST00000531551 LHFPL5Q8TAF8 219 aa14.1□□□□□ -0.15
CTSB-222ENST00000531551 RBM14Q96PK6 669 aaKnown RBP14.1□□□□□ -0.15
CTSB-222ENST00000531551 RNF5Q99942 180 aa14.1□□□□□ -0.15
CTSB-222ENST00000531551 GPN1Q9HCN4 374 aaPredicted RBP14.1□□□□□ -0.15
CTSB-222ENST00000531551 FAM212BQ9NTI7 297 aaPredicted RBP14.1□□□□□ -0.15
CTSB-222ENST00000531551 MARCH11A6NNE9 402 aa14.09□□□□□ -0.15
CTSB-222ENST00000531551 NBR2O15453 112 aa14.09□□□□□ -0.15
CTSB-222ENST00000531551 PRAF2O60831 178 aa14.09□□□□□ -0.15
CTSB-222ENST00000531551 OR2F2O95006 317 aa14.09□□□□□ -0.15
CTSB-222ENST00000531551 IL5P05113 134 aa14.09□□□□□ -0.15
CTSB-222ENST00000531551 AKR1C2P52895 323 aa14.09□□□□□ -0.15
CTSB-222ENST00000531551 TATDN3Q17R31 274 aa14.09□□□□□ -0.15
CTSB-222ENST00000531551 SELENOHQ8IZQ5 122 aaKnown RBP14.09□□□□□ -0.15
CTSB-222ENST00000531551 LGI3Q8N145 548 aa14.09□□□□□ -0.15
CTSB-222ENST00000531551 COQ8AQ8NI60 647 aa14.09□□□□□ -0.15
CTSB-222ENST00000531551 ZNF431Q8TF32 576 aaPredicted RBP14.09□□□□□ -0.15
CTSB-222ENST00000531551 RHOVQ96L33 236 aa14.09□□□□□ -0.15
CTSB-222ENST00000531551 C1RLQ9NZP8 487 aa14.09□□□□□ -0.15
CTSB-222ENST00000531551 COMMD9Q9P000 198 aa14.09□□□□□ -0.15
CTSB-222ENST00000531551 METTL1Q9UBP6 276 aaKnown RBP14.09□□□□□ -0.15
CTSB-222ENST00000531551 DUS4LO95620 317 aaKnown RBP14.08□□□□□ -0.16
CTSB-222ENST00000531551 HILS1P60008 231 aa14.08□□□□□ -0.16
CTSB-222ENST00000531551 SRPXP78539 464 aa14.08□□□□□ -0.16
CTSB-222ENST00000531551 PSG5Q15238 335 aa14.08□□□□□ -0.16
CTSB-222ENST00000531551 VMA21Q3ZAQ7 101 aa14.08□□□□□ -0.16
CTSB-222ENST00000531551 TMEM86BQ8N661 226 aa14.08□□□□□ -0.16
CTSB-222ENST00000531551 RBPMSQ93062 196 aaKnown RBP14.08□□□□□ -0.16
CTSB-222ENST00000531551 TMEM56Q96MV1 263 aa14.08□□□□□ -0.16
CTSB-222ENST00000531551 CLCC1Q96S66 551 aa14.08□□□□□ -0.16
CTSB-222ENST00000531551 PHB2Q99623 299 aa14.08□□□□□ -0.16
CTSB-222ENST00000531551 FBXL15Q9H469 300 aa14.08□□□□□ -0.16
CTSB-222ENST00000531551 MOB4Q9Y3A3 225 aa14.08□□□□□ -0.16
CTSB-222ENST00000531551 TMEM56-RWDD3S4R434 201 aa14.08□□□□□ -0.16
CTSB-222ENST00000531551 TEP1Q99973 2627 aaKnown RBP14.08□□□□□ -0.16
CTSB-222ENST00000531551 TCF21O43680 179 aa14.08□□□□□ -0.16
CTSB-222ENST00000531551 CHST1O43916 411 aa14.08□□□□□ -0.16
CTSB-222ENST00000531551 CREBL2O60519 120 aaPredicted RBP14.08□□□□□ -0.16
CTSB-222ENST00000531551 IGLV2-23P01705 113 aa14.08□□□□□ -0.16
CTSB-222ENST00000531551 SAA1P0DJI8 122 aaPredicted RBP14.08□□□□□ -0.16
CTSB-222ENST00000531551 SLC35G3Q8N808 338 aa14.08□□□□□ -0.16
CTSB-222ENST00000531551 RRNAD1Q96FB5 475 aaKnown RBP14.08□□□□□ -0.16
CTSB-222ENST00000531551 JMJD8Q96S16 334 aa14.08□□□□□ -0.16
CTSB-222ENST00000531551 AIFM2Q9BRQ8 373 aa14.08□□□□□ -0.16
CTSB-222ENST00000531551 PLSCR3Q9NRY6 295 aa14.08□□□□□ -0.16
CTSB-222ENST00000531551 A0A0A6YYJ9 748 aa14.07□□□□□ -0.16
CTSB-222ENST00000531551 RRHO14718 337 aa14.07□□□□□ -0.16
CTSB-222ENST00000531551 ATG12O94817 140 aa14.07□□□□□ -0.16
CTSB-222ENST00000531551 HOXB5P09067 269 aa14.07□□□□□ -0.16
CTSB-222ENST00000531551 LYZL2Q7Z4W2 148 aa14.07□□□□□ -0.16
CTSB-222ENST00000531551 NPBQ8NG41 125 aa14.07□□□□□ -0.16
CTSB-222ENST00000531551 OR8H1Q8NGG4 311 aa14.07□□□□□ -0.16
CTSB-222ENST00000531551 MITD1Q8WV92 249 aa14.07□□□□□ -0.16
CTSB-222ENST00000531551 RASL11BQ9BPW5 248 aa14.07□□□□□ -0.16
CTSB-222ENST00000531551 TMEM140Q9NV12 185 aa14.07□□□□□ -0.16
CTSB-222ENST00000531551 SH2D7A6NKC9 451 aaPredicted RBP14.06□□□□□ -0.16
CTSB-222ENST00000531551 UBE2KP61086 200 aa14.06□□□□□ -0.16
CTSB-222ENST00000531551 OR4A47Q6IF82 309 aa14.06□□□□□ -0.16
CTSB-222ENST00000531551 H2BFWTQ7Z2G1 175 aa14.06□□□□□ -0.16
CTSB-222ENST00000531551 C12orf45Q8N5I9 185 aaPredicted RBP14.06□□□□□ -0.16
CTSB-222ENST00000531551 SEC22AQ96IW7 307 aa14.06□□□□□ -0.16
CTSB-222ENST00000531551 TPSG1Q9NRR2 321 aa14.06□□□□□ -0.16
CTSB-222ENST00000531551 ALG5Q9Y673 324 aa14.06□□□□□ -0.16
CTSB-222ENST00000531551 A0A0B4J293 547 aa14.06□□□□□ -0.16
CTSB-222ENST00000531551 GPR137BO60478 399 aa14.06□□□□□ -0.16
CTSB-222ENST00000531551 OR2A4O95047 310 aa14.06□□□□□ -0.16
CTSB-222ENST00000531551 SPDEFO95238 335 aa14.06□□□□□ -0.16
CTSB-222ENST00000531551 IGKV1-5P01602 117 aa14.06□□□□□ -0.16
CTSB-222ENST00000531551 IZUMO4Q1ZYL8 232 aa14.06□□□□□ -0.16
CTSB-222ENST00000531551 C9orf152Q5JTZ5 239 aa14.06□□□□□ -0.16
CTSB-222ENST00000531551 Q8N9W7 124 aa14.06□□□□□ -0.16
CTSB-222ENST00000531551 VSTM2AQ8TAG5 236 aa14.06□□□□□ -0.16
CTSB-222ENST00000531551 IL22RA2Q969J5 263 aa14.06□□□□□ -0.16
CTSB-222ENST00000531551 OR2A7Q96R45 310 aa14.06□□□□□ -0.16
CTSB-222ENST00000531551 RANBP3Q9H6Z4 567 aaPredicted RBP14.06□□□□□ -0.16
CTSB-222ENST00000531551 RAB18Q9NP72 206 aa14.06□□□□□ -0.16
CTSB-222ENST00000531551 SSNA1O43805 119 aa14.05□□□□□ -0.16
CTSB-222ENST00000531551 NDUFA3O95167 84 aa14.05□□□□□ -0.16
CTSB-222ENST00000531551 SRSF2Q01130 221 aaKnown RBP14.05□□□□□ -0.16
CTSB-222ENST00000531551 C5orf64Q2M2E5 130 aa14.05□□□□□ -0.16
CTSB-222ENST00000531551 C16orf82Q7Z2V1 217 aa14.05□□□□□ -0.16
CTSB-222ENST00000531551 C5orf56Q8N8D9 126 aa14.05□□□□□ -0.16
CTSB-222ENST00000531551 NSG2Q9Y328 171 aa14.05□□□□□ -0.16
CTSB-222ENST00000531551 SIGLEC9Q9Y336 463 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms