RNA–Protein interactions for RNA: ENST00000530906.1

PCF11-205, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 3

Gene PCF11, Length 628 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-205ENST00000530906 G6PCP35575 357 aa4.58□□□□□ -1.68
PCF11-205ENST00000530906 CA7P43166 264 aa4.58□□□□□ -1.68
PCF11-205ENST00000530906 BRWD1-AS2P59051 145 aa4.58□□□□□ -1.68
PCF11-205ENST00000530906 OR2B8PP59922 312 aa4.58□□□□□ -1.68
PCF11-205ENST00000530906 RAB11AP62491 216 aa4.58□□□□□ -1.68
PCF11-205ENST00000530906 DLK1P80370 383 aa4.58□□□□□ -1.68
PCF11-205ENST00000530906 AKR1C1Q04828 323 aa4.58□□□□□ -1.68
PCF11-205ENST00000530906 BSPH1Q075Z2 132 aa4.58□□□□□ -1.68
PCF11-205ENST00000530906 TMEM267Q0VDI3 215 aaPredicted RBP4.58□□□□□ -1.68
PCF11-205ENST00000530906 ZNF816Q0VGE8 651 aaPredicted RBP4.58□□□□□ -1.68
PCF11-205ENST00000530906 PNRC1Q12796 327 aaPredicted RBP4.58□□□□□ -1.68
PCF11-205ENST00000530906 KLRB1Q12918 225 aa4.58□□□□□ -1.68
PCF11-205ENST00000530906 RTL8BQ17RB0 113 aa4.58□□□□□ -1.68
PCF11-205ENST00000530906 C17orf58Q2M2W7 97 aa4.58□□□□□ -1.68
PCF11-205ENST00000530906 RNF212Q495C1 297 aa4.58□□□□□ -1.68
PCF11-205ENST00000530906 SPANXN5Q5MJ07 72 aa4.58□□□□□ -1.68
PCF11-205ENST00000530906 NCMAPQ5T1S8 102 aa4.58□□□□□ -1.68
PCF11-205ENST00000530906 PRAMEF5Q5TYX0 476 aa4.58□□□□□ -1.68
PCF11-205ENST00000530906 FAM122CQ6P4D5 195 aa4.58□□□□□ -1.68
PCF11-205ENST00000530906 SPSB3Q6PJ21 355 aa4.58□□□□□ -1.68
PCF11-205ENST00000530906 VHLLQ6RSH7 139 aa4.58□□□□□ -1.68
PCF11-205ENST00000530906 ATRAIDQ6UW56 229 aa4.58□□□□□ -1.68
PCF11-205ENST00000530906 CLEC9AQ6UXN8 241 aa4.58□□□□□ -1.68
PCF11-205ENST00000530906 RBMS3Q6XE24 437 aaKnown RBP4.58□□□□□ -1.68
PCF11-205ENST00000530906 SLC25A48Q6ZT89 311 aaKnown RBP4.58□□□□□ -1.68
PCF11-205ENST00000530906 SLC35E3Q7Z769 313 aa4.58□□□□□ -1.68
PCF11-205ENST00000530906 THNSL2Q86YJ6 484 aa4.58□□□□□ -1.68
PCF11-205ENST00000530906 ZNF709Q8N972 641 aa4.58□□□□□ -1.68
PCF11-205ENST00000530906 BOLLQ8N9W6 283 aaKnown RBP4.58□□□□□ -1.68
PCF11-205ENST00000530906 ZNRF1Q8ND25 227 aa4.58□□□□□ -1.68
PCF11-205ENST00000530906 ZNF439Q8NDP4 499 aa4.58□□□□□ -1.68
PCF11-205ENST00000530906 ST6GALNAC3Q8NDV1 305 aa4.58□□□□□ -1.68
PCF11-205ENST00000530906 OR4A16Q8NH70 328 aa4.58□□□□□ -1.68
PCF11-205ENST00000530906 RFESDQ8TAC1 157 aa4.58□□□□□ -1.68
PCF11-205ENST00000530906 TNFRSF14Q92956 283 aa4.58□□□□□ -1.68
PCF11-205ENST00000530906 RNASE6Q93091 150 aaKnown RBP4.58□□□□□ -1.68
PCF11-205ENST00000530906 C5orf30Q96GV9 206 aa4.58□□□□□ -1.68
PCF11-205ENST00000530906 OR4C12Q96R67 309 aa4.58□□□□□ -1.68
PCF11-205ENST00000530906 TXNDC17Q9BRA2 123 aa4.58□□□□□ -1.68
PCF11-205ENST00000530906 SSBP3Q9BWW4 388 aaPredicted RBP4.58□□□□□ -1.68
PCF11-205ENST00000530906 MS4A7Q9GZW8 240 aaPredicted RBP4.58□□□□□ -1.68
PCF11-205ENST00000530906 SAP30LQ9HAJ7 183 aa4.58□□□□□ -1.68
PCF11-205ENST00000530906 FKBP11Q9NYL4 201 aa4.58□□□□□ -1.68
PCF11-205ENST00000530906 PRNDQ9UKY0 176 aa4.58□□□□□ -1.68
PCF11-205ENST00000530906 FOXA2Q9Y261 457 aaPredicted RBP4.58□□□□□ -1.68
PCF11-205ENST00000530906 FAM96BQ9Y3D0 163 aa4.58□□□□□ -1.68
PCF11-205ENST00000530906 SVILO95425 2214 aa4.58□□□□□ -1.68
PCF11-205ENST00000530906 DSCAML1Q8TD84 2053 aa4.58□□□□□ -1.68
PCF11-205ENST00000530906 MYO15AQ9UKN7 3530 aa4.58□□□□□ -1.68
PCF11-205ENST00000530906 USF3Q68DE3 2245 aa4.57□□□□□ -1.68
PCF11-205ENST00000530906 PPIAL4EA0A075B759 164 aa4.57□□□□□ -1.68
PCF11-205ENST00000530906 IGHV3OR15-7A0A075B7D8 119 aa4.57□□□□□ -1.68
PCF11-205ENST00000530906 CTXND1A0A1B0GTU2 59 aa4.57□□□□□ -1.68
PCF11-205ENST00000530906 A0A1W2PPH5 198 aa4.57□□□□□ -1.68
PCF11-205ENST00000530906 CXorf65A6NEN9 183 aa4.57□□□□□ -1.68
PCF11-205ENST00000530906 FAM74A7A6NL05 159 aa4.57□□□□□ -1.68
PCF11-205ENST00000530906 C15orf61A6NNL5 157 aa4.57□□□□□ -1.68
PCF11-205ENST00000530906 PPIAL4DF5H284 164 aa4.57□□□□□ -1.68
PCF11-205ENST00000530906 INS-IGF2F8WCM5 200 aa4.57□□□□□ -1.68
PCF11-205ENST00000530906 TMEM250H0YL14 139 aa4.57□□□□□ -1.68
PCF11-205ENST00000530906 H3BP45 60 aa4.57□□□□□ -1.68
PCF11-205ENST00000530906 TMEM178BH3BS89 294 aa4.57□□□□□ -1.68
PCF11-205ENST00000530906 AGPAT2O15120 278 aa4.57□□□□□ -1.68
PCF11-205ENST00000530906 FCGR3BO75015 233 aa4.57□□□□□ -1.68
PCF11-205ENST00000530906 TSPAN9O75954 239 aa4.57□□□□□ -1.68
PCF11-205ENST00000530906 APOA2P02652 100 aa4.57□□□□□ -1.68
PCF11-205ENST00000530906 RBP4P02753 201 aa4.57□□□□□ -1.68
PCF11-205ENST00000530906 MT-ND4LP03901 98 aa4.57□□□□□ -1.68
PCF11-205ENST00000530906 THBDP07204 575 aa4.57□□□□□ -1.68
PCF11-205ENST00000530906 PPIAL4FP0DN26 164 aa4.57□□□□□ -1.68
PCF11-205ENST00000530906 BCL2P10415 239 aa4.57□□□□□ -1.68
PCF11-205ENST00000530906 MDKP21741 143 aaPredicted RBP4.57□□□□□ -1.68
PCF11-205ENST00000530906 APOBEC3AP31941 199 aaPredicted RBP4.57□□□□□ -1.68
PCF11-205ENST00000530906 MRPS11P82912 194 aaKnown RBP4.57□□□□□ -1.68
PCF11-205ENST00000530906 NHLH1Q02575 133 aa4.57□□□□□ -1.68
PCF11-205ENST00000530906 TLE1Q04724 770 aa4.57□□□□□ -1.68
PCF11-205ENST00000530906 SSX2Q16385 188 aa4.57□□□□□ -1.68
PCF11-205ENST00000530906 HFEQ30201 348 aa4.57□□□□□ -1.68
PCF11-205ENST00000530906 FAM74A3Q4VXF1 159 aa4.57□□□□□ -1.68
PCF11-205ENST00000530906 LRRC10Q5BKY1 277 aa4.57□□□□□ -1.68
PCF11-205ENST00000530906 CT45A1Q5HYN5 189 aa4.57□□□□□ -1.68
PCF11-205ENST00000530906 NCR3LG1Q68D85 454 aa4.57□□□□□ -1.68
PCF11-205ENST00000530906 HEPN1Q6WQI6 88 aa4.57□□□□□ -1.68
PCF11-205ENST00000530906 HAPLN4Q86UW8 402 aa4.57□□□□□ -1.68
PCF11-205ENST00000530906 LINC00311Q8N616 119 aa4.57□□□□□ -1.68
PCF11-205ENST00000530906 TPRX1Q8N7U7 411 aa4.57□□□□□ -1.68
PCF11-205ENST00000530906 SREK1IP1Q8N9Q2 155 aaPredicted RBP4.57□□□□□ -1.68
PCF11-205ENST00000530906 OR4A5Q8NH83 315 aa4.57□□□□□ -1.68
PCF11-205ENST00000530906 CLDND2Q8NHS1 167 aa4.57□□□□□ -1.68
PCF11-205ENST00000530906 CT45A3Q8NHU0 189 aa4.57□□□□□ -1.68
PCF11-205ENST00000530906 VSTM2AQ8TAG5 236 aa4.57□□□□□ -1.68
PCF11-205ENST00000530906 OSR1Q8TAX0 266 aaPredicted RBP4.57□□□□□ -1.68
PCF11-205ENST00000530906 UBALD1Q8TB05 177 aa4.57□□□□□ -1.68
PCF11-205ENST00000530906 ZNF596Q8TC21 504 aa4.57□□□□□ -1.68
PCF11-205ENST00000530906 SFT2D1Q8WV19 159 aa4.57□□□□□ -1.68
PCF11-205ENST00000530906 RAB1CQ92928 201 aa4.57□□□□□ -1.68
PCF11-205ENST00000530906 NEIL1Q96FI4 390 aaPredicted RBP4.57□□□□□ -1.68
PCF11-205ENST00000530906 RCC1LQ96I51 464 aaKnown RBP4.57□□□□□ -1.68
PCF11-205ENST00000530906 NIPSNAP3BQ9BS92 247 aa4.57□□□□□ -1.68
PCF11-205ENST00000530906 PCGF1Q9BSM1 259 aa4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms