RNA–Protein interactions for RNA: ENST00000530008.1

CAPRIN1-208, Transcript of cell cycle associated protein 1, humanhuman

TSL 4

Gene CAPRIN1, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-208ENST00000530008 GABRA2P47869 451 aa3.33□□□□□ -1.88
CAPRIN1-208ENST00000530008 GZMMP51124 257 aa3.33□□□□□ -1.88
CAPRIN1-208ENST00000530008 TNFAIP8L3Q5GJ75 292 aa3.33□□□□□ -1.88
CAPRIN1-208ENST00000530008 CNEP1R1Q8N9A8 125 aa3.33□□□□□ -1.88
CAPRIN1-208ENST00000530008 NMNAT3Q96T66 252 aa3.33□□□□□ -1.88
CAPRIN1-208ENST00000530008 CMTM6Q9NX76 183 aa3.33□□□□□ -1.88
CAPRIN1-208ENST00000530008 FBXO5Q9UKT4 447 aa3.33□□□□□ -1.88
CAPRIN1-208ENST00000530008 ADGRL3Q9HAR2 1447 aa3.33□□□□□ -1.88
CAPRIN1-208ENST00000530008 PQLC2LA1A4F0 135 aa3.32□□□□□ -1.88
CAPRIN1-208ENST00000530008 OR5K4A6NMS3 321 aa3.32□□□□□ -1.88
CAPRIN1-208ENST00000530008 A8MUN3 132 aa3.32□□□□□ -1.88
CAPRIN1-208ENST00000530008 UBFD1O14562 309 aaKnown RBP3.32□□□□□ -1.88
CAPRIN1-208ENST00000530008 NSA2O95478 260 aaKnown RBP3.32□□□□□ -1.88
CAPRIN1-208ENST00000530008 IGHV1-69P01742 117 aa3.32□□□□□ -1.88
CAPRIN1-208ENST00000530008 CD200P41217 278 aa3.32□□□□□ -1.88
CAPRIN1-208ENST00000530008 CAV1Q03135 178 aa3.32□□□□□ -1.88
CAPRIN1-208ENST00000530008 TMED2Q15363 201 aa3.32□□□□□ -1.88
CAPRIN1-208ENST00000530008 PRELID1Q9Y255 219 aa3.32□□□□□ -1.88
CAPRIN1-208ENST00000530008 GRIN2BQ13224 1484 aa3.32□□□□□ -1.88
CAPRIN1-208ENST00000530008 SEC16AO15027 2179 aa3.32□□□□□ -1.88
CAPRIN1-208ENST00000530008 LTBP4Q8N2S1 1624 aa3.31□□□□□ -1.88
CAPRIN1-208ENST00000530008 CPMP14384 443 aa3.31□□□□□ -1.88
CAPRIN1-208ENST00000530008 HIST1H1TP22492 207 aaPredicted RBP3.31□□□□□ -1.88
CAPRIN1-208ENST00000530008 RPL27AP46776 148 aaKnown RBP3.31□□□□□ -1.88
CAPRIN1-208ENST00000530008 RWDD2BP57060 319 aa3.31□□□□□ -1.88
CAPRIN1-208ENST00000530008 TMEM97Q5BJF2 176 aa3.31□□□□□ -1.88
CAPRIN1-208ENST00000530008 C20orf196Q8IYI0 205 aa3.31□□□□□ -1.88
CAPRIN1-208ENST00000530008 KLK6Q92876 244 aa3.31□□□□□ -1.88
CAPRIN1-208ENST00000530008 TMEM222Q9H0R3 208 aa3.31□□□□□ -1.88
CAPRIN1-208ENST00000530008 DCSTAMPQ9H295 470 aa3.31□□□□□ -1.88
CAPRIN1-208ENST00000530008 MRPL27Q9P0M9 148 aaKnown RBP3.31□□□□□ -1.88
CAPRIN1-208ENST00000530008 ARL2BPQ9Y2Y0 163 aa3.31□□□□□ -1.88
CAPRIN1-208ENST00000530008 HSPE1-MOB4S4R3N1 261 aa3.31□□□□□ -1.88
CAPRIN1-208ENST00000530008 IGLV10-54A0A075B6I4 117 aa3.3□□□□□ -1.88
CAPRIN1-208ENST00000530008 A0A1B0GW54 56 aa3.3□□□□□ -1.88
CAPRIN1-208ENST00000530008 VPS37CA5D8V6 355 aaPredicted RBP3.3□□□□□ -1.88
CAPRIN1-208ENST00000530008 PLA2G10O15496 165 aa3.3□□□□□ -1.88
CAPRIN1-208ENST00000530008 CNIH1O95406 144 aa3.3□□□□□ -1.88
CAPRIN1-208ENST00000530008 HAND1O96004 215 aa3.3□□□□□ -1.88
CAPRIN1-208ENST00000530008 SERPINA1P01009 418 aa3.3□□□□□ -1.88
CAPRIN1-208ENST00000530008 RBM11P57052 281 aaKnown RBP3.3□□□□□ -1.88
CAPRIN1-208ENST00000530008 TAS2R30P59541 319 aa3.3□□□□□ -1.88
CAPRIN1-208ENST00000530008 GNA12Q03113 381 aa3.3□□□□□ -1.88
CAPRIN1-208ENST00000530008 C2orf91Q6ZV80 131 aa3.3□□□□□ -1.88
CAPRIN1-208ENST00000530008 GLT6D1Q7Z4J2 308 aa3.3□□□□□ -1.88
CAPRIN1-208ENST00000530008 OR5C1Q8NGR4 320 aa3.3□□□□□ -1.88
CAPRIN1-208ENST00000530008 ROPN1LQ96C74 230 aa3.3□□□□□ -1.88
CAPRIN1-208ENST00000530008 ULBP3Q9BZM4 244 aa3.3□□□□□ -1.88
CAPRIN1-208ENST00000530008 TXNL4BQ9NX01 149 aaKnown RBP3.3□□□□□ -1.88
CAPRIN1-208ENST00000530008 ZNF391Q9UJN7 358 aa3.3□□□□□ -1.88
CAPRIN1-208ENST00000530008 PRELID3BQ9Y3B1 194 aa3.3□□□□□ -1.88
CAPRIN1-208ENST00000530008 WRNQ14191 1432 aaPredicted RBP eCLIP3.29□□□□□ -1.88
CAPRIN1-208ENST00000530008 ABCC12Q96J65 1359 aa3.29□□□□□ -1.88
CAPRIN1-208ENST00000530008 KNCNA6PVL3 124 aa3.29□□□□□ -1.88
CAPRIN1-208ENST00000530008 TTRP02766 147 aa3.29□□□□□ -1.88
CAPRIN1-208ENST00000530008 KCNE1P15382 129 aa3.29□□□□□ -1.88
CAPRIN1-208ENST00000530008 ARF6P62330 175 aa3.29□□□□□ -1.88
CAPRIN1-208ENST00000530008 PSG4Q00888 419 aa3.29□□□□□ -1.88
CAPRIN1-208ENST00000530008 LPCAT3Q6P1A2 487 aa3.29□□□□□ -1.88
CAPRIN1-208ENST00000530008 OR6V1Q8N148 313 aa3.29□□□□□ -1.88
CAPRIN1-208ENST00000530008 OR13C8Q8NGS7 320 aa3.29□□□□□ -1.88
CAPRIN1-208ENST00000530008 CLDND2Q8NHS1 167 aa3.29□□□□□ -1.88
CAPRIN1-208ENST00000530008 TRIM4Q9C037 500 aa3.29□□□□□ -1.88
CAPRIN1-208ENST00000530008 AICDAQ9GZX7 198 aa3.29□□□□□ -1.88
CAPRIN1-208ENST00000530008 TRPM3Q9HCF6 1732 aaPredicted RBP3.28□□□□□ -1.88
CAPRIN1-208ENST00000530008 IGHV3-15A0A0B4J1V0 119 aa3.28□□□□□ -1.88
CAPRIN1-208ENST00000530008 MDFIC2A0A1B0GVS7 189 aa3.28□□□□□ -1.88
CAPRIN1-208ENST00000530008 G3V3Q6 166 aa3.28□□□□□ -1.88
CAPRIN1-208ENST00000530008 GZMBP10144 247 aa3.28□□□□□ -1.88
CAPRIN1-208ENST00000530008 TAS2R20P59543 309 aa3.28□□□□□ -1.88
CAPRIN1-208ENST00000530008 SNRPD2P62316 118 aaKnown RBP3.28□□□□□ -1.88
CAPRIN1-208ENST00000530008 GUK1Q16774 197 aa3.28□□□□□ -1.88
CAPRIN1-208ENST00000530008 GLT8D1Q68CQ7 371 aa3.28□□□□□ -1.88
CAPRIN1-208ENST00000530008 DOK5Q9P104 306 aa3.28□□□□□ -1.88
CAPRIN1-208ENST00000530008 MINOS1-NBL1R4GNA1 71 aa3.28□□□□□ -1.88
CAPRIN1-208ENST00000530008 DSCAML1Q8TD84 2053 aa3.28□□□□□ -1.89
CAPRIN1-208ENST00000530008 CCDC144AA2RUR9 1427 aa3.27□□□□□ -1.89
CAPRIN1-208ENST00000530008 MTUS2Q5JR59 1369 aa3.27□□□□□ -1.89
CAPRIN1-208ENST00000530008 DHX57Q6P158 1386 aaKnown RBP3.27□□□□□ -1.89
CAPRIN1-208ENST00000530008 H3BPC8 53 aa3.27□□□□□ -1.89
CAPRIN1-208ENST00000530008 CTSGP08311 255 aa3.27□□□□□ -1.89
CAPRIN1-208ENST00000530008 P0C880 135 aa3.27□□□□□ -1.89
CAPRIN1-208ENST00000530008 RPL5P46777 297 aaKnown RBP3.27□□□□□ -1.89
CAPRIN1-208ENST00000530008 CDK10Q15131 360 aa3.27□□□□□ -1.89
CAPRIN1-208ENST00000530008 CHCHD2P9Q5T1J5 151 aaPredicted RBP3.27□□□□□ -1.89
CAPRIN1-208ENST00000530008 S100A7AQ86SG5 101 aa3.27□□□□□ -1.89
CAPRIN1-208ENST00000530008 MIEN1Q9BRT3 115 aa3.27□□□□□ -1.89
CAPRIN1-208ENST00000530008 NAV1Q8NEY1 1877 aa3.26□□□□□ -1.89
CAPRIN1-208ENST00000530008 OR4C46A6NHA9 309 aa3.26□□□□□ -1.89
CAPRIN1-208ENST00000530008 NOS1APO75052 506 aaPredicted RBP3.26□□□□□ -1.89
CAPRIN1-208ENST00000530008 HLA-DRB1P01911 266 aa3.26□□□□□ -1.89
CAPRIN1-208ENST00000530008 PPP1R2P41236 205 aa3.26□□□□□ -1.89
CAPRIN1-208ENST00000530008 XCL1P47992 114 aa3.26□□□□□ -1.89
CAPRIN1-208ENST00000530008 RAB13P51153 203 aa3.26□□□□□ -1.89
CAPRIN1-208ENST00000530008 POLR2GP62487 172 aaKnown RBP eCLIP3.26□□□□□ -1.89
CAPRIN1-208ENST00000530008 RPL30P62888 115 aaKnown RBP3.26□□□□□ -1.89
CAPRIN1-208ENST00000530008 HIST1H3AP68431 136 aa3.26□□□□□ -1.89
CAPRIN1-208ENST00000530008 H3F3AP84243 136 aa3.26□□□□□ -1.89
CAPRIN1-208ENST00000530008 RUNX1Q01196 453 aa3.26□□□□□ -1.89
CAPRIN1-208ENST00000530008 GRK1Q15835 563 aa3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 139.7 ms