RNA–Protein interactions for RNA: ENST00000530004.5

TTC39A-216, Transcript of tetratricopeptide repeat domain 39A, humanhuman

TSL 1 (best) BASIC

Gene TTC39A, Length 1,780 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-216ENST00000530004 PRRX1P54821 245 aa11.68□□□□□ -0.54
TTC39A-216ENST00000530004 DMBX1Q8NFW5 382 aa11.68□□□□□ -0.54
TTC39A-216ENST00000530004 OR8H1Q8NGG4 311 aa11.68□□□□□ -0.54
TTC39A-216ENST00000530004 ST6GALNAC6Q969X2 333 aa11.68□□□□□ -0.54
TTC39A-216ENST00000530004 WRBO00258 174 aa11.67□□□□□ -0.54
TTC39A-216ENST00000530004 CD5LO43866 347 aa11.67□□□□□ -0.54
TTC39A-216ENST00000530004 IGLV1-47P01700 117 aa11.67□□□□□ -0.54
TTC39A-216ENST00000530004 HKR1P10072 659 aa11.67□□□□□ -0.54
TTC39A-216ENST00000530004 FOSL1P15407 271 aa11.67□□□□□ -0.54
TTC39A-216ENST00000530004 IL3RAP26951 378 aa11.67□□□□□ -0.54
TTC39A-216ENST00000530004 ERVK-16P61578 105 aa11.67□□□□□ -0.54
TTC39A-216ENST00000530004 DIAPH2-AS1Q14236 149 aa11.67□□□□□ -0.54
TTC39A-216ENST00000530004 RTL8BQ17RB0 113 aa11.67□□□□□ -0.54
TTC39A-216ENST00000530004 C1orf122Q6ZSJ8 110 aa11.67□□□□□ -0.54
TTC39A-216ENST00000530004 PNKDQ8N490 385 aa11.67□□□□□ -0.54
TTC39A-216ENST00000530004 BEND2Q8NDZ0 799 aa11.67□□□□□ -0.54
TTC39A-216ENST00000530004 SIRPDQ9H106 197 aa11.67□□□□□ -0.54
TTC39A-216ENST00000530004 SIRT7Q9NRC8 400 aa11.67□□□□□ -0.54
TTC39A-216ENST00000530004 SLC35D1Q9NTN3 355 aa11.67□□□□□ -0.54
TTC39A-216ENST00000530004 COA4Q9NYJ1 87 aa11.67□□□□□ -0.54
TTC39A-216ENST00000530004 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.67□□□□□ -0.54
TTC39A-216ENST00000530004 FLNAP21333 2647 aaKnown RBP11.67□□□□□ -0.54
TTC39A-216ENST00000530004 ABCA1O95477 2261 aa11.67□□□□□ -0.54
TTC39A-216ENST00000530004 BCL2L11O43521 198 aa11.67□□□□□ -0.54
TTC39A-216ENST00000530004 MMP9P14780 707 aa11.67□□□□□ -0.54
TTC39A-216ENST00000530004 NQO2P16083 231 aa11.67□□□□□ -0.54
TTC39A-216ENST00000530004 PVALBP20472 110 aaPredicted RBP11.67□□□□□ -0.54
TTC39A-216ENST00000530004 RPL12P30050 165 aaKnown RBP11.67□□□□□ -0.54
TTC39A-216ENST00000530004 HLA-DRB5Q30154 266 aa11.67□□□□□ -0.54
TTC39A-216ENST00000530004 MIDNQ504T8 468 aa11.67□□□□□ -0.54
TTC39A-216ENST00000530004 TEX261Q6UWH6 196 aa11.67□□□□□ -0.54
TTC39A-216ENST00000530004 SSX9Q7RTT3 188 aa11.67□□□□□ -0.54
TTC39A-216ENST00000530004 VKORC1L1Q8N0U8 176 aa11.67□□□□□ -0.54
TTC39A-216ENST00000530004 OR13D1Q8NGV5 346 aa11.67□□□□□ -0.54
TTC39A-216ENST00000530004 RBMXL1Q96E39 390 aaKnown RBP11.67□□□□□ -0.54
TTC39A-216ENST00000530004 NABP2Q9BQ15 211 aa11.67□□□□□ -0.54
TTC39A-216ENST00000530004 C11orf1Q9H5F2 150 aa11.67□□□□□ -0.54
TTC39A-216ENST00000530004 C7orf69Q9H7B7 122 aa11.67□□□□□ -0.54
TTC39A-216ENST00000530004 ZC4H2Q9NQZ6 224 aa11.67□□□□□ -0.54
TTC39A-216ENST00000530004 U3KQ87 197 aa11.67□□□□□ -0.54
TTC39A-216ENST00000530004 CSPG4Q6UVK1 2322 aa11.66□□□□□ -0.54
TTC39A-216ENST00000530004 J3QLI3 93 aa11.66□□□□□ -0.54
TTC39A-216ENST00000530004 CHST1O43916 411 aa11.66□□□□□ -0.54
TTC39A-216ENST00000530004 TOX4O94842 621 aa11.66□□□□□ -0.54
TTC39A-216ENST00000530004 APOA2P02652 100 aa11.66□□□□□ -0.54
TTC39A-216ENST00000530004 PRTN3P24158 256 aa11.66□□□□□ -0.54
TTC39A-216ENST00000530004 P2RY1P47900 373 aa11.66□□□□□ -0.54
TTC39A-216ENST00000530004 DHRS7BQ6IAN0 325 aaPredicted RBP11.66□□□□□ -0.54
TTC39A-216ENST00000530004 TGIF2LXQ8IUE1 241 aa11.66□□□□□ -0.54
TTC39A-216ENST00000530004 SMR3AQ99954 134 aa11.66□□□□□ -0.54
TTC39A-216ENST00000530004 ARPC5LQ9BPX5 153 aa11.66□□□□□ -0.54
TTC39A-216ENST00000530004 UNKLQ9H9P5 680 aaKnown RBP11.66□□□□□ -0.54
TTC39A-216ENST00000530004 AUP1Q9Y679 476 aa11.66□□□□□ -0.54
TTC39A-216ENST00000530004 TEX15Q9BXT5 2789 aa11.66□□□□□ -0.54
TTC39A-216ENST00000530004 H0YJW9 148 aa11.65□□□□□ -0.54
TTC39A-216ENST00000530004 BUB1B-PAK6H3BSN5 160 aa11.65□□□□□ -0.54
TTC39A-216ENST00000530004 VAMP2P63027 116 aa11.65□□□□□ -0.54
TTC39A-216ENST00000530004 SLC51BQ86UW2 128 aa11.65□□□□□ -0.54
TTC39A-216ENST00000530004 ZNF680Q8NEM1 530 aa11.65□□□□□ -0.54
TTC39A-216ENST00000530004 OR5AN1Q8NGI8 311 aa11.65□□□□□ -0.54
TTC39A-216ENST00000530004 OR4P4Q8NGL7 312 aa11.65□□□□□ -0.54
TTC39A-216ENST00000530004 TBX15Q96SF7 602 aa11.65□□□□□ -0.54
TTC39A-216ENST00000530004 PCGF1Q9BSM1 259 aa11.65□□□□□ -0.54
TTC39A-216ENST00000530004 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.65□□□□□ -0.54
TTC39A-216ENST00000530004 PAIP2BQ9ULR5 123 aaKnown RBP11.65□□□□□ -0.54
TTC39A-216ENST00000530004 AMMECR1Q9Y4X0 333 aaPredicted RBP11.65□□□□□ -0.54
TTC39A-216ENST00000530004 ACANP16112 2415 aa11.65□□□□□ -0.54
TTC39A-216ENST00000530004 H7C2Y5 167 aa11.64□□□□□ -0.55
TTC39A-216ENST00000530004 RBMXL2O75526 392 aaKnown RBP11.64□□□□□ -0.55
TTC39A-216ENST00000530004 CFDP00746 253 aaPredicted RBP11.64□□□□□ -0.55
TTC39A-216ENST00000530004 AVPP01185 164 aa11.64□□□□□ -0.55
TTC39A-216ENST00000530004 IGKV1-16P04430 117 aa11.64□□□□□ -0.55
TTC39A-216ENST00000530004 OR9G9P0C7N8 305 aa11.64□□□□□ -0.55
TTC39A-216ENST00000530004 RRASP10301 218 aa11.64□□□□□ -0.55
TTC39A-216ENST00000530004 TAGLNQ01995 201 aaKnown RBP11.64□□□□□ -0.55
TTC39A-216ENST00000530004 KLRD1Q13241 179 aa11.64□□□□□ -0.55
TTC39A-216ENST00000530004 ZNF767PQ75MW2 155 aa11.64□□□□□ -0.55
TTC39A-216ENST00000530004 VMO1Q7Z5L0 202 aa11.64□□□□□ -0.55
TTC39A-216ENST00000530004 OR2C3Q8N628 320 aa11.64□□□□□ -0.55
TTC39A-216ENST00000530004 OR11H6Q8NGC7 330 aa11.64□□□□□ -0.55
TTC39A-216ENST00000530004 ZNF471Q9BX82 626 aaPredicted RBP11.64□□□□□ -0.55
TTC39A-216ENST00000530004 TMEM140Q9NV12 185 aa11.64□□□□□ -0.55
TTC39A-216ENST00000530004 WNK2Q9Y3S1 2297 aa11.64□□□□□ -0.55
TTC39A-216ENST00000530004 FAM90A9PA6NNJ1 464 aa11.64□□□□□ -0.55
TTC39A-216ENST00000530004 FAM90A26D6RGX4 464 aa11.64□□□□□ -0.55
TTC39A-216ENST00000530004 SYNGR2O43760 224 aa11.64□□□□□ -0.55
TTC39A-216ENST00000530004 GPR137BO60478 399 aa11.64□□□□□ -0.55
TTC39A-216ENST00000530004 TMEM50AO95807 157 aa11.64□□□□□ -0.55
TTC39A-216ENST00000530004 HRASP01112 189 aa11.64□□□□□ -0.55
TTC39A-216ENST00000530004 ARG1P05089 322 aa11.64□□□□□ -0.55
TTC39A-216ENST00000530004 CAV2P51636 162 aa11.64□□□□□ -0.55
TTC39A-216ENST00000530004 GPR157Q5UAW9 335 aa11.64□□□□□ -0.55
TTC39A-216ENST00000530004 RHOVQ96L33 236 aa11.64□□□□□ -0.55
TTC39A-216ENST00000530004 RAB40CQ96S21 281 aa11.64□□□□□ -0.55
TTC39A-216ENST00000530004 FAM24AA6NFZ4 105 aa11.63□□□□□ -0.55
TTC39A-216ENST00000530004 SPDEFO95238 335 aa11.63□□□□□ -0.55
TTC39A-216ENST00000530004 LY6G6DO95868 133 aa11.63□□□□□ -0.55
TTC39A-216ENST00000530004 IAPPP10997 89 aa11.63□□□□□ -0.55
TTC39A-216ENST00000530004 PAX9P55771 341 aa11.63□□□□□ -0.55
TTC39A-216ENST00000530004 OR2B8PP59922 312 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms