RNA–Protein interactions for RNA: ENST00000529873.5

CTNND1-221, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,931 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-221ENST00000529873 SELENOTP62341 195 aa7.28□□□□□ -1.24
CTNND1-221ENST00000529873 RRN3P1Q2M238 152 aa7.28□□□□□ -1.24
CTNND1-221ENST00000529873 PAPPA-AS1Q5QFB9 102 aa7.28□□□□□ -1.24
CTNND1-221ENST00000529873 GTF3AQ92664 365 aaKnown RBP7.28□□□□□ -1.24
CTNND1-221ENST00000529873 PPP1R3EQ9H7J1 279 aa7.28□□□□□ -1.24
CTNND1-221ENST00000529873 ZNF638Q14966 1978 aaKnown RBP7.28□□□□□ -1.24
CTNND1-221ENST00000529873 IGHV3-72A0A0B4J1Y9 119 aa7.28□□□□□ -1.24
CTNND1-221ENST00000529873 HLA-DQB1P01920 261 aa7.28□□□□□ -1.24
CTNND1-221ENST00000529873 RPS20P60866 119 aaKnown RBP7.28□□□□□ -1.24
CTNND1-221ENST00000529873 CACNG7P62955 275 aa7.28□□□□□ -1.24
CTNND1-221ENST00000529873 OR5P3Q8WZ94 311 aa7.28□□□□□ -1.24
CTNND1-221ENST00000529873 Q96M66 194 aa7.28□□□□□ -1.24
CTNND1-221ENST00000529873 LINC00470Q9BZP3 86 aa7.28□□□□□ -1.24
CTNND1-221ENST00000529873 TTC3P53804 2025 aa7.28□□□□□ -1.24
CTNND1-221ENST00000529873 PSME4Q14997 1843 aa7.28□□□□□ -1.24
CTNND1-221ENST00000529873 TMEM229AB2RXF0 380 aa7.28□□□□□ -1.24
CTNND1-221ENST00000529873 HSPB1P04792 205 aaKnown RBP7.28□□□□□ -1.24
CTNND1-221ENST00000529873 LINC00869P0C866 280 aa7.28□□□□□ -1.24
CTNND1-221ENST00000529873 MEIG1Q5JSS6 88 aa7.28□□□□□ -1.24
CTNND1-221ENST00000529873 IBA57Q5T440 356 aaKnown RBP7.28□□□□□ -1.24
CTNND1-221ENST00000529873 LSM10Q969L4 123 aaKnown RBP7.28□□□□□ -1.24
CTNND1-221ENST00000529873 KCNE5Q9UJ90 142 aa7.28□□□□□ -1.24
CTNND1-221ENST00000529873 LOC285556D6RIA3 1793 aa7.28□□□□□ -1.24
CTNND1-221ENST00000529873 PPP1R17O96001 155 aa7.28□□□□□ -1.24
CTNND1-221ENST00000529873 FAM53AQ6NSI3 398 aaPredicted RBP7.28□□□□□ -1.24
CTNND1-221ENST00000529873 FADS6Q8N9I5 356 aa7.28□□□□□ -1.24
CTNND1-221ENST00000529873 CTHRC1Q96CG8 243 aa7.28□□□□□ -1.24
CTNND1-221ENST00000529873 WDR90Q96KV7 1748 aa7.28□□□□□ -1.24
CTNND1-221ENST00000529873 ITGB1BP1O14713 200 aa7.28□□□□□ -1.24
CTNND1-221ENST00000529873 MFAP2P55001 183 aa7.28□□□□□ -1.24
CTNND1-221ENST00000529873 ZNF146Q15072 292 aa7.28□□□□□ -1.24
CTNND1-221ENST00000529873 UNQ9370/PRO34162Q6UXP9 181 aa7.28□□□□□ -1.24
CTNND1-221ENST00000529873 ABHD12Q8N2K0 398 aa7.28□□□□□ -1.24
CTNND1-221ENST00000529873 EEF1AKMT3Q96AZ1 226 aa7.28□□□□□ -1.24
CTNND1-221ENST00000529873 TMEM186Q96B77 213 aa7.28□□□□□ -1.24
CTNND1-221ENST00000529873 WFDC6Q9BQY6 131 aa7.28□□□□□ -1.24
CTNND1-221ENST00000529873 NDUFAF3Q9BU61 184 aa7.28□□□□□ -1.24
CTNND1-221ENST00000529873 TUBD1Q9UJT1 453 aa7.28□□□□□ -1.24
CTNND1-221ENST00000529873 RALGAPA2Q2PPJ7 1873 aa7.28□□□□□ -1.24
CTNND1-221ENST00000529873 IGHV1-69-2A0A0G2JMI3 117 aa7.27□□□□□ -1.25
CTNND1-221ENST00000529873 A0A1W2PR77 199 aa7.27□□□□□ -1.25
CTNND1-221ENST00000529873 ODAMA1E959 279 aa7.27□□□□□ -1.25
CTNND1-221ENST00000529873 J3QW42 95 aa7.27□□□□□ -1.25
CTNND1-221ENST00000529873 OR2A4O95047 310 aa7.27□□□□□ -1.25
CTNND1-221ENST00000529873 RUNX1Q01196 453 aa7.27□□□□□ -1.25
CTNND1-221ENST00000529873 IFITM2Q01629 132 aa7.27□□□□□ -1.25
CTNND1-221ENST00000529873 OR2A7Q96R45 310 aa7.27□□□□□ -1.25
CTNND1-221ENST00000529873 C2orf88Q9BSF0 95 aa7.27□□□□□ -1.25
CTNND1-221ENST00000529873 A0A1W2PQM1 296 aa7.27□□□□□ -1.25
CTNND1-221ENST00000529873 NPIPB9F8W1W9 429 aa7.27□□□□□ -1.25
CTNND1-221ENST00000529873 CFDP00746 253 aaPredicted RBP7.27□□□□□ -1.25
CTNND1-221ENST00000529873 CTSBP07858 339 aa7.27□□□□□ -1.25
CTNND1-221ENST00000529873 MUC1P15941 1255 aaPredicted RBP7.27□□□□□ -1.25
CTNND1-221ENST00000529873 GUCA2BQ16661 112 aa7.27□□□□□ -1.25
CTNND1-221ENST00000529873 PSMG4Q5JS54 123 aa7.27□□□□□ -1.25
CTNND1-221ENST00000529873 HCP5Q6MZN7 132 aa7.27□□□□□ -1.25
CTNND1-221ENST00000529873 OR52M1Q8NGK5 317 aa7.27□□□□□ -1.25
CTNND1-221ENST00000529873 OR1P1Q8NH06 330 aa7.27□□□□□ -1.25
CTNND1-221ENST00000529873 PGPEP1Q9NXJ5 209 aa7.27□□□□□ -1.25
CTNND1-221ENST00000529873 ATP1A1-AS1Q5TC04 95 aa7.27□□□□□ -1.25
CTNND1-221ENST00000529873 LAMTOR1Q6IAA8 161 aa7.27□□□□□ -1.25
CTNND1-221ENST00000529873 TMEM252Q8N6L7 170 aa7.27□□□□□ -1.25
CTNND1-221ENST00000529873 CYB561D1Q8N8Q1 229 aa7.27□□□□□ -1.25
CTNND1-221ENST00000529873 SGMS2Q8NHU3 365 aa7.27□□□□□ -1.25
CTNND1-221ENST00000529873 MAP1LC3AQ9H492 121 aa7.27□□□□□ -1.25
CTNND1-221ENST00000529873 ZNF236Q9UL36 1845 aa7.27□□□□□ -1.25
CTNND1-221ENST00000529873 A0A1B0GWB2 263 aa7.27□□□□□ -1.25
CTNND1-221ENST00000529873 PTGDSP41222 190 aa7.27□□□□□ -1.25
CTNND1-221ENST00000529873 TFPI2P48307 235 aa7.27□□□□□ -1.25
CTNND1-221ENST00000529873 TMEM187Q14656 261 aa7.27□□□□□ -1.25
CTNND1-221ENST00000529873 FGFRL1Q8N441 504 aa7.27□□□□□ -1.25
CTNND1-221ENST00000529873 TAF15Q92804 592 aaKnown RBP eCLIP7.27□□□□□ -1.253e-8■■■□□ 14.9
CTNND1-221ENST00000529873 DUX5Q96PT3 197 aa7.27□□□□□ -1.25
CTNND1-221ENST00000529873 MRPL32Q9BYC8 188 aaKnown RBP7.27□□□□□ -1.25
CTNND1-221ENST00000529873 AURKAIP1Q9NWT8 199 aaPredicted RBP7.27□□□□□ -1.25
CTNND1-221ENST00000529873 HSPB7Q9UBY9 170 aa7.27□□□□□ -1.25
CTNND1-221ENST00000529873 MCM3APO60318 1980 aa7.27□□□□□ -1.25
CTNND1-221ENST00000529873 C19orf67A6NJJ6 358 aa7.26□□□□□ -1.25
CTNND1-221ENST00000529873 B9A039 149 aa7.26□□□□□ -1.25
CTNND1-221ENST00000529873 GCSAMLQ5JQS6 135 aa7.26□□□□□ -1.25
CTNND1-221ENST00000529873 NEUROG1Q92886 237 aa7.26□□□□□ -1.25
CTNND1-221ENST00000529873 SLC25A38Q96DW6 304 aa7.26□□□□□ -1.25
CTNND1-221ENST00000529873 RARRES2Q99969 163 aa7.26□□□□□ -1.25
CTNND1-221ENST00000529873 CLEC7AQ9BXN2 247 aa7.26□□□□□ -1.25
CTNND1-221ENST00000529873 RSPO3Q9BXY4 272 aaPredicted RBP7.26□□□□□ -1.25
CTNND1-221ENST00000529873 MEGF9Q9H1U4 602 aa7.26□□□□□ -1.25
CTNND1-221ENST00000529873 TMEM56-RWDD3S4R434 201 aa7.26□□□□□ -1.25
CTNND1-221ENST00000529873 hCG_38984A0A1B0GV85 526 aa7.26□□□□□ -1.25
CTNND1-221ENST00000529873 A0A1W2PP11 408 aa7.26□□□□□ -1.25
CTNND1-221ENST00000529873 PRR19A6NJB7 356 aa7.26□□□□□ -1.25
CTNND1-221ENST00000529873 S1PR2O95136 353 aa7.26□□□□□ -1.25
CTNND1-221ENST00000529873 CKS2P33552 79 aa7.26□□□□□ -1.25
CTNND1-221ENST00000529873 FAM106AQ4KMX7 169 aa7.26□□□□□ -1.25
CTNND1-221ENST00000529873 CD200R1LQ6Q8B3 271 aa7.26□□□□□ -1.25
CTNND1-221ENST00000529873 OR9G1Q8NH87 305 aa7.26□□□□□ -1.25
CTNND1-221ENST00000529873 RAX2Q96IS3 184 aa7.26□□□□□ -1.25
CTNND1-221ENST00000529873 AQP10Q96PS8 301 aa7.26□□□□□ -1.25
CTNND1-221ENST00000529873 TLNRD1Q9H1K6 362 aa7.26□□□□□ -1.25
CTNND1-221ENST00000529873 NPIPB13A6NJU9 1138 aa7.26□□□□□ -1.25
CTNND1-221ENST00000529873 NPIPB4C9JG80 1138 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms