RNA–Protein interactions for RNA: ENST00000529540.5

NR1H3-231, Transcript of nuclear receptor subfamily 1 group H member 3, human

TSL 2

Gene NR1H3, Length 1,673 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NR1H3-231	ENST00000529540	REC114	Q7Z4M0	266 aa		12.1	□□□□□ -0.47
NR1H3-231	ENST00000529540	FAM58A	Q8N1B3	248 aa		12.1	□□□□□ -0.47
NR1H3-231	ENST00000529540	OR5R1	Q8NH85	324 aa		12.1	□□□□□ -0.47
NR1H3-231	ENST00000529540	ABHD5	Q8WTS1	349 aa		12.1	□□□□□ -0.47
NR1H3-231	ENST00000529540	FRZB	Q92765	325 aa		12.1	□□□□□ -0.47
NR1H3-231	ENST00000529540	GPR146	Q96CH1	333 aa		12.1	□□□□□ -0.47
NR1H3-231	ENST00000529540	GPR61	Q9BZJ8	451 aa		12.1	□□□□□ -0.47
NR1H3-231	ENST00000529540	HES4	Q9HCC6	221 aa		12.1	□□□□□ -0.47
NR1H3-231	ENST00000529540	SDF2L1	Q9HCN8	221 aa		12.1	□□□□□ -0.47
NR1H3-231	ENST00000529540	TMEM106B	Q9NUM4	274 aa		12.1	□□□□□ -0.47
NR1H3-231	ENST00000529540	ICE1	Q9Y2F5	2266 aa		12.1	□□□□□ -0.47
NR1H3-231	ENST00000529540	IGKV1-6	A0A0C4DH72	117 aa		12.1	□□□□□ -0.47
NR1H3-231	ENST00000529540	NDUFS6	O75380	124 aa	Known RBP	12.1	□□□□□ -0.47
NR1H3-231	ENST00000529540	F2R	P25116	425 aa		12.1	□□□□□ -0.47
NR1H3-231	ENST00000529540	THNSL2	Q86YJ6	484 aa		12.1	□□□□□ -0.47
NR1H3-231	ENST00000529540	LSM10	Q969L4	123 aa	Known RBP	12.1	□□□□□ -0.47
NR1H3-231	ENST00000529540	AGMAT	Q9BSE5	352 aa		12.1	□□□□□ -0.47
NR1H3-231	ENST00000529540	GNG13	Q9P2W3	67 aa		12.1	□□□□□ -0.47
NR1H3-231	ENST00000529540	USP9Y	O00507	2555 aa	Predicted RBP	12.09	□□□□□ -0.47
NR1H3-231	ENST00000529540	TENM4	Q6N022	2769 aa		12.09	□□□□□ -0.47
NR1H3-231	ENST00000529540	ROS1	P08922	2347 aa		12.09	□□□□□ -0.47
NR1H3-231	ENST00000529540	LHB	P01229	141 aa		12.09	□□□□□ -0.47
NR1H3-231	ENST00000529540	RAB11A	P62491	216 aa		12.09	□□□□□ -0.47
NR1H3-231	ENST00000529540	GFI1B	Q5VTD9	330 aa		12.09	□□□□□ -0.47
NR1H3-231	ENST00000529540	ZNF880	Q6PDB4	577 aa		12.09	□□□□□ -0.47
NR1H3-231	ENST00000529540	ZNF826P	Q6ZT77	177 aa		12.09	□□□□□ -0.47
NR1H3-231	ENST00000529540	SCGB1C1	Q8TD33	95 aa		12.09	□□□□□ -0.47
NR1H3-231	ENST00000529540	CCL17	Q92583	94 aa		12.09	□□□□□ -0.47
NR1H3-231	ENST00000529540	TIMD4	Q96H15	378 aa		12.09	□□□□□ -0.47
NR1H3-231	ENST00000529540	C14orf144	Q96I85	54 aa		12.09	□□□□□ -0.47
NR1H3-231	ENST00000529540	CABLES2	Q9BTV7	478 aa		12.09	□□□□□ -0.47
NR1H3-231	ENST00000529540	PITPNC1	Q9UKF7	332 aa		12.09	□□□□□ -0.47
NR1H3-231	ENST00000529540	TRAV38-1	A0A0B4J264	116 aa		12.08	□□□□□ -0.48
NR1H3-231	ENST00000529540	IGHV3-64D	A0A0J9YX35	117 aa		12.08	□□□□□ -0.48
NR1H3-231	ENST00000529540	IFNA1	P01562	189 aa		12.08	□□□□□ -0.48
NR1H3-231	ENST00000529540	RD3L	P0DJH9	198 aa		12.08	□□□□□ -0.48
NR1H3-231	ENST00000529540	CDKN1A	P38936	164 aa		12.08	□□□□□ -0.48
NR1H3-231	ENST00000529540	SERF2	P84101	59 aa		12.08	□□□□□ -0.48
NR1H3-231	ENST00000529540	GCSAM	Q8N6F7	178 aa		12.08	□□□□□ -0.48
NR1H3-231	ENST00000529540	ZNF525	Q8N782	197 aa		12.08	□□□□□ -0.48
NR1H3-231	ENST00000529540	PYGO2	Q9BRQ0	406 aa		12.08	□□□□□ -0.48
NR1H3-231	ENST00000529540	CHODL	Q9H9P2	273 aa		12.08	□□□□□ -0.48
NR1H3-231	ENST00000529540	RPRM	Q9NS64	109 aa		12.08	□□□□□ -0.48
NR1H3-231	ENST00000529540	VAX2	Q9UIW0	290 aa		12.08	□□□□□ -0.48
NR1H3-231	ENST00000529540	ARFGEF3	Q5TH69	2177 aa		12.07	□□□□□ -0.48
NR1H3-231	ENST00000529540		A0A0G2JRQ6	117 aa		12.07	□□□□□ -0.48
NR1H3-231	ENST00000529540	NPIPB11	E5RHQ5	1161 aa		12.07	□□□□□ -0.48
NR1H3-231	ENST00000529540	TMEM178B	H3BS89	294 aa		12.07	□□□□□ -0.48
NR1H3-231	ENST00000529540	ZNF146	Q15072	292 aa		12.07	□□□□□ -0.48
NR1H3-231	ENST00000529540	ZNF726P1	Q15940	193 aa		12.07	□□□□□ -0.48
NR1H3-231	ENST00000529540	SLC25A24	Q6NUK1	477 aa		12.07	□□□□□ -0.48
NR1H3-231	ENST00000529540	ACP7	Q6ZNF0	438 aa		12.07	□□□□□ -0.48
NR1H3-231	ENST00000529540	MRPL30	Q8TCC3	161 aa	Known RBP	12.07	□□□□□ -0.48
NR1H3-231	ENST00000529540	RNASEH2C	Q8TDP1	164 aa	Known RBP	12.07	□□□□□ -0.48
NR1H3-231	ENST00000529540	NINJ1	Q92982	152 aa		12.07	□□□□□ -0.48
NR1H3-231	ENST00000529540	PPIAL4E	A0A075B759	164 aa		12.06	□□□□□ -0.48
NR1H3-231	ENST00000529540	PPIAL4D	F5H284	164 aa		12.06	□□□□□ -0.48
NR1H3-231	ENST00000529540	DVL1	O14640	695 aa		12.06	□□□□□ -0.48
NR1H3-231	ENST00000529540	PPIAL4F	P0DN26	164 aa		12.06	□□□□□ -0.48
NR1H3-231	ENST00000529540	TMEM267	Q0VDI3	215 aa	Predicted RBP	12.06	□□□□□ -0.48
NR1H3-231	ENST00000529540	GAMT	Q14353	236 aa		12.06	□□□□□ -0.48
NR1H3-231	ENST00000529540	LRRC75B	Q2VPJ9	315 aa		12.06	□□□□□ -0.48
NR1H3-231	ENST00000529540	SPRN	Q5BIV9	151 aa		12.06	□□□□□ -0.48
NR1H3-231	ENST00000529540	TMEM41B	Q5BJD5	291 aa		12.06	□□□□□ -0.48
NR1H3-231	ENST00000529540	TEX36	Q5VZQ5	186 aa		12.06	□□□□□ -0.48
NR1H3-231	ENST00000529540	PINX1	Q96BK5	328 aa	Known RBP	12.06	□□□□□ -0.48
NR1H3-231	ENST00000529540	ZNF665	Q9H7R5	613 aa		12.06	□□□□□ -0.48
NR1H3-231	ENST00000529540	SRD5A3	Q9H8P0	318 aa		12.06	□□□□□ -0.48
NR1H3-231	ENST00000529540	BEX4	Q9NWD9	120 aa	Predicted RBP	12.06	□□□□□ -0.48
NR1H3-231	ENST00000529540	OR2W1	Q9Y3N9	320 aa		12.06	□□□□□ -0.48
NR1H3-231	ENST00000529540	PPIAL4A	Q9Y536	164 aa		12.06	□□□□□ -0.48
NR1H3-231	ENST00000529540	DOPEY2	Q9Y3R5	2298 aa		12.06	□□□□□ -0.48
NR1H3-231	ENST00000529540	OOEP	A6NGQ2	149 aa		12.06	□□□□□ -0.48
NR1H3-231	ENST00000529540	TSTD3	H0UI37	97 aa		12.06	□□□□□ -0.48
NR1H3-231	ENST00000529540	SH2D1B	O14796	132 aa		12.06	□□□□□ -0.48
NR1H3-231	ENST00000529540	FABP4	P15090	132 aa		12.06	□□□□□ -0.48
NR1H3-231	ENST00000529540	DDT	P30046	118 aa		12.06	□□□□□ -0.48
NR1H3-231	ENST00000529540	MDH2	P40926	338 aa	Known RBP	12.06	□□□□□ -0.48
NR1H3-231	ENST00000529540	COA6	Q5JTJ3	125 aa	Known RBP	12.06	□□□□□ -0.48
NR1H3-231	ENST00000529540	C5orf24	Q7Z6I8	188 aa		12.06	□□□□□ -0.48
NR1H3-231	ENST00000529540	TGIF2LY	Q8IUE0	185 aa		12.06	□□□□□ -0.48
NR1H3-231	ENST00000529540	TMEM183A	Q8IXX5	376 aa		12.06	□□□□□ -0.48
NR1H3-231	ENST00000529540	RAB1C	Q92928	201 aa		12.06	□□□□□ -0.48
NR1H3-231	ENST00000529540	PACRG	Q96M98	296 aa	Predicted RBP	12.06	□□□□□ -0.48
NR1H3-231	ENST00000529540	HIST1H2BL	Q99880	126 aa		12.06	□□□□□ -0.48
NR1H3-231	ENST00000529540	OR14J1	Q9UGF5	321 aa		12.06	□□□□□ -0.48
NR1H3-231	ENST00000529540	NAT8	Q9UHE5	227 aa		12.06	□□□□□ -0.48
NR1H3-231	ENST00000529540	TIMM9	Q9Y5J7	89 aa		12.06	□□□□□ -0.48
NR1H3-231	ENST00000529540	DSCAM	O60469	2012 aa		12.05	□□□□□ -0.48
NR1H3-231	ENST00000529540	SMCO3	A2RU48	225 aa		12.05	□□□□□ -0.48
NR1H3-231	ENST00000529540	ZFP92	A6NM28	416 aa		12.05	□□□□□ -0.48
NR1H3-231	ENST00000529540	DEGS1	O15121	323 aa		12.05	□□□□□ -0.48
NR1H3-231	ENST00000529540	SYNGR2	O43760	224 aa		12.05	□□□□□ -0.48
NR1H3-231	ENST00000529540	SERPINE2	P07093	398 aa		12.05	□□□□□ -0.48
NR1H3-231	ENST00000529540	DSCR9	P59020	149 aa		12.05	□□□□□ -0.48
NR1H3-231	ENST00000529540	WDR25	Q64LD2	544 aa	Predicted RBP	12.05	□□□□□ -0.48
NR1H3-231	ENST00000529540	CYP2G1P	Q6ZSU1	146 aa		12.05	□□□□□ -0.48
NR1H3-231	ENST00000529540	CENPV	Q7Z7K6	275 aa	Predicted RBP	12.05	□□□□□ -0.48
NR1H3-231	ENST00000529540	OR10A7	Q8NGE5	316 aa		12.05	□□□□□ -0.48
NR1H3-231	ENST00000529540	PPP1R35	Q8TAP8	253 aa		12.05	□□□□□ -0.48

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