RNA–Protein interactions for RNA: ENST00000529308.5

USP35-203, Transcript of ubiquitin specific peptidase 35, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP35, Length 4,216 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-203ENST00000529308 ARL2-SNX15V9GYD0 113 aa13.02□□□□□ -0.33
USP35-203ENST00000529308 TMSB15BA0A087X1C1 80 aa13.02□□□□□ -0.33
USP35-203ENST00000529308 LOC102723971A0A1B0GUV8 181 aa13.02□□□□□ -0.33
USP35-203ENST00000529308 LILRA1O75019 489 aa13.02□□□□□ -0.33
USP35-203ENST00000529308 CEACAM3P40198 252 aa13.02□□□□□ -0.33
USP35-203ENST00000529308 PDPNQ86YL7 162 aa13.02□□□□□ -0.33
USP35-203ENST00000529308 DANCRP0C864 163 aa13.01□□□□□ -0.33
USP35-203ENST00000529308 CRYGSP22914 178 aa13.01□□□□□ -0.33
USP35-203ENST00000529308 UCP3P55916 312 aa13.01□□□□□ -0.33
USP35-203ENST00000529308 TICRRQ7Z2Z1 1910 aa13.01□□□□□ -0.33
USP35-203ENST00000529308 IGHV2OR16-5A0A0B4J2B6 119 aa13.01□□□□□ -0.33
USP35-203ENST00000529308 SRSF3P84103 164 aaKnown RBP13.01□□□□□ -0.33
USP35-203ENST00000529308 ZNF343Q6P1L6 599 aa13.01□□□□□ -0.33
USP35-203ENST00000529308 RNASEKQ6P5S7 137 aaKnown RBP13.01□□□□□ -0.33
USP35-203ENST00000529308 OR8I2Q8N0Y5 310 aa13.01□□□□□ -0.33
USP35-203ENST00000529308 FAM89BQ8N5H3 189 aa13.01□□□□□ -0.33
USP35-203ENST00000529308 SCNM1Q9BWG6 230 aa13.01□□□□□ -0.33
USP35-203ENST00000529308 TCF19Q9Y242 345 aa13.01□□□□□ -0.33
USP35-203ENST00000529308 TLN2Q9Y4G6 2542 aa13.01□□□□□ -0.33
USP35-203ENST00000529308 IER3P46695 156 aa13.01□□□□□ -0.33
USP35-203ENST00000529308 AMTP48728 403 aa13.01□□□□□ -0.33
USP35-203ENST00000529308 SPCS3P61009 180 aa13.01□□□□□ -0.33
USP35-203ENST00000529308 ZNF385CQ66K41 422 aaPredicted RBP13.01□□□□□ -0.33
USP35-203ENST00000529308 PQLC2LA1A4F0 135 aa13□□□□□ -0.33
USP35-203ENST00000529308 TGOLN2O43493 480 aa13□□□□□ -0.33
USP35-203ENST00000529308 ZNF253O75346 499 aa13□□□□□ -0.33
USP35-203ENST00000529308 GLRXP35754 106 aa13□□□□□ -0.33
USP35-203ENST00000529308 ACP7Q6ZNF0 438 aa13□□□□□ -0.33
USP35-203ENST00000529308 NDFIP1Q9BT67 221 aa13□□□□□ -0.33
USP35-203ENST00000529308 MANBALQ9NQG1 85 aa13□□□□□ -0.33
USP35-203ENST00000529308 NCOA6Q14686 2063 aaPredicted RBP13□□□□□ -0.33
USP35-203ENST00000529308 MKI67P46013 3256 aaKnown RBP13□□□□□ -0.33
USP35-203ENST00000529308 ATXN7O15265 892 aaPredicted RBP13□□□□□ -0.33
USP35-203ENST00000529308 SELLP14151 372 aa13□□□□□ -0.33
USP35-203ENST00000529308 ETFRF1Q6IPR1 90 aa13□□□□□ -0.33
USP35-203ENST00000529308 LAMA3Q16787 3333 aa13□□□□□ -0.33
USP35-203ENST00000529308 GFRA3O60609 400 aa13□□□□□ -0.33
USP35-203ENST00000529308 ECSCRQ19T08 205 aa13□□□□□ -0.33
USP35-203ENST00000529308 MEGF10Q96KG7 1140 aa13□□□□□ -0.33
USP35-203ENST00000529308 LAMA2P24043 3122 aaKnown RBP12.99□□□□□ -0.33
USP35-203ENST00000529308 SRSF10O75494 262 aaKnown RBP12.99□□□□□ -0.33
USP35-203ENST00000529308 LINC00869P0C866 280 aa12.99□□□□□ -0.33
USP35-203ENST00000529308 CCL1P22362 96 aa12.99□□□□□ -0.33
USP35-203ENST00000529308 UCP1P25874 307 aa12.99□□□□□ -0.33
USP35-203ENST00000529308 S100A4P26447 101 aaKnown RBP12.99□□□□□ -0.33
USP35-203ENST00000529308 QTRT1Q9BXR0 403 aaKnown RBP12.99□□□□□ -0.33
USP35-203ENST00000529308 PLXNA4Q9HCM2 1894 aa12.99□□□□□ -0.33
USP35-203ENST00000529308 TRAV24A0A0B4J272 114 aa12.99□□□□□ -0.33
USP35-203ENST00000529308 LY86O95711 162 aa12.99□□□□□ -0.33
USP35-203ENST00000529308 CD55P08174 381 aa12.99□□□□□ -0.33
USP35-203ENST00000529308 HOXB1P14653 301 aaPredicted RBP12.99□□□□□ -0.33
USP35-203ENST00000529308 RPL8P62917 257 aaKnown RBP12.99□□□□□ -0.33
USP35-203ENST00000529308 HGFACQ04756 655 aa12.99□□□□□ -0.33
USP35-203ENST00000529308 FAM166AQ6J272 317 aa12.99□□□□□ -0.33
USP35-203ENST00000529308 PNRC2Q9NPJ4 139 aaKnown RBP12.99□□□□□ -0.33
USP35-203ENST00000529308 TMEM167BQ9NRX6 74 aa12.99□□□□□ -0.33
USP35-203ENST00000529308 CRISP2P16562 243 aa12.99□□□□□ -0.33
USP35-203ENST00000529308 RPL29P47914 159 aaKnown RBP12.99□□□□□ -0.33
USP35-203ENST00000529308 SUPT4H1P63272 117 aaKnown RBP12.99□□□□□ -0.33
USP35-203ENST00000529308 PEAR1Q5VY43 1037 aaPredicted RBP12.99□□□□□ -0.33
USP35-203ENST00000529308 C16orf82Q7Z2V1 217 aa12.99□□□□□ -0.33
USP35-203ENST00000529308 NHLRC2Q8NBF2 726 aa12.99□□□□□ -0.33
USP35-203ENST00000529308 RASL11BQ9BPW5 248 aa12.99□□□□□ -0.33
USP35-203ENST00000529308 MIOXQ9UGB7 285 aa12.99□□□□□ -0.33
USP35-203ENST00000529308 KCNMB2Q9Y691 235 aa12.99□□□□□ -0.33
USP35-203ENST00000529308 C2CD3Q4AC94 2353 aa12.99□□□□□ -0.33
USP35-203ENST00000529308 CEACAM18A8MTB9 384 aa12.99□□□□□ -0.33
USP35-203ENST00000529308 HOXD4P09016 255 aaPredicted RBP12.99□□□□□ -0.33
USP35-203ENST00000529308 RND2P52198 227 aa12.99□□□□□ -0.33
USP35-203ENST00000529308 C10orf113Q5VZT2 155 aa12.99□□□□□ -0.33
USP35-203ENST00000529308 HEXA-AS1Q9H8Q6 139 aa12.99□□□□□ -0.33
USP35-203ENST00000529308 RFNGQ9Y644 331 aa12.99□□□□□ -0.33
USP35-203ENST00000529308 GPR6P46095 362 aaPredicted RBP12.98□□□□□ -0.33
USP35-203ENST00000529308 RPL27AP46776 148 aaKnown RBP12.98□□□□□ -0.33
USP35-203ENST00000529308 TIMM23BQ5SRD1 257 aa12.98□□□□□ -0.33
USP35-203ENST00000529308 THYN1Q9P016 225 aa12.98□□□□□ -0.33
USP35-203ENST00000529308 SPTBN4Q9H254 2564 aa12.98□□□□□ -0.33
USP35-203ENST00000529308 PCDH15Q96QU1 1955 aa12.98□□□□□ -0.33
USP35-203ENST00000529308 ZNF98A6NK75 572 aa12.98□□□□□ -0.33
USP35-203ENST00000529308 FCER1GP30273 86 aa12.98□□□□□ -0.33
USP35-203ENST00000529308 GFRA1P56159 465 aa12.98□□□□□ -0.33
USP35-203ENST00000529308 C11orf42Q8N5U0 333 aa12.98□□□□□ -0.33
USP35-203ENST00000529308 CHD8Q9HCK8 2581 aa12.98□□□□□ -0.33
USP35-203ENST00000529308 OR2J3O76001 311 aa12.98□□□□□ -0.33
USP35-203ENST00000529308 PTBP3O95758 552 aaKnown RBP12.98□□□□□ -0.33
USP35-203ENST00000529308 ZNF137PP52743 207 aa12.98□□□□□ -0.33
USP35-203ENST00000529308 HSPE1P61604 102 aaKnown RBP12.98□□□□□ -0.33
USP35-203ENST00000529308 OR2D3Q8NGH3 330 aa12.98□□□□□ -0.33
USP35-203ENST00000529308 NAGKQ9UJ70 344 aa12.98□□□□□ -0.33
USP35-203ENST00000529308 SNURFLB1AK76 121 aa12.97□□□□□ -0.33
USP35-203ENST00000529308 LYNX1G3V0Z9 82 aa12.97□□□□□ -0.33
USP35-203ENST00000529308 LDLRAD4O15165 306 aa12.97□□□□□ -0.33
USP35-203ENST00000529308 LYNX1P0DP58 116 aa12.97□□□□□ -0.33
USP35-203ENST00000529308 CD40P25942 277 aa12.97□□□□□ -0.33
USP35-203ENST00000529308 RCC1LQ96I51 464 aaKnown RBP12.97□□□□□ -0.33
USP35-203ENST00000529308 WFIKKN1Q96NZ8 548 aa12.97□□□□□ -0.33
USP35-203ENST00000529308 SEMA5BQ9P283 1151 aa12.97□□□□□ -0.33
USP35-203ENST00000529308 FBLN5Q9UBX5 448 aa12.97□□□□□ -0.33
USP35-203ENST00000529308 CXorf1O96002 111 aa12.97□□□□□ -0.33
USP35-203ENST00000529308 CCL3L1P16619 93 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms