RNA–Protein interactions for RNA: ENST00000525685.5

CD44-219, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 728 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-219ENST00000525685 APOBEC3DQ96AK3 386 aaPredicted RBP2.56□□□□□ -2
CD44-219ENST00000525685 SLC35E1Q96K37 410 aa2.56□□□□□ -2
CD44-219ENST00000525685 RDH12Q96NR8 316 aa2.56□□□□□ -2
CD44-219ENST00000525685 OR8B4Q96RC9 309 aa2.56□□□□□ -2
CD44-219ENST00000525685 CNN2Q99439 309 aaKnown RBP2.56□□□□□ -2
CD44-219ENST00000525685 NRIP2Q9BQI9 281 aa2.56□□□□□ -2
CD44-219ENST00000525685 DNTTIP1Q9H147 329 aa2.56□□□□□ -2
CD44-219ENST00000525685 METTL9Q9H1A3 318 aa2.56□□□□□ -2
CD44-219ENST00000525685 DAZ3Q9NR90 486 aaKnown RBP2.56□□□□□ -2
CD44-219ENST00000525685 TUBG2Q9NRH3 451 aa2.56□□□□□ -2
CD44-219ENST00000525685 PIPOXQ9P0Z9 390 aa2.56□□□□□ -2
CD44-219ENST00000525685 TAAR3PQ9P1P4 343 aa2.56□□□□□ -2
CD44-219ENST00000525685 NAGKQ9UJ70 344 aa2.56□□□□□ -2
CD44-219ENST00000525685 STARD10Q9Y365 291 aa2.56□□□□□ -2
CD44-219ENST00000525685 PRELID3BQ9Y3B1 194 aa2.56□□□□□ -2
CD44-219ENST00000525685 USP9YO00507 2555 aaPredicted RBP2.56□□□□□ -2
CD44-219ENST00000525685 TANC2Q9HCD6 1990 aa2.56□□□□□ -2
CD44-219ENST00000525685 PRR14LQ5THK1 2151 aa2.56□□□□□ -2
CD44-219ENST00000525685 PKDREJQ9NTG1 2253 aa2.56□□□□□ -2
CD44-219ENST00000525685 FLNCQ14315 2725 aa2.55□□□□□ -2
CD44-219ENST00000525685 A0A096LNT2 108 aa2.55□□□□□ -2
CD44-219ENST00000525685 TRBV6-6A0A0A6YYG2 114 aa2.55□□□□□ -2
CD44-219ENST00000525685 LOC100130705A0A1B0GUX0 176 aa2.55□□□□□ -2
CD44-219ENST00000525685 PQLC2LA1A4F0 135 aa2.55□□□□□ -2
CD44-219ENST00000525685 TMEM238C9JI98 176 aa2.55□□□□□ -2
CD44-219ENST00000525685 ZNF670-ZNF695F2Z2N8 137 aa2.55□□□□□ -2
CD44-219ENST00000525685 PHYHO14832 338 aa2.55□□□□□ -2
CD44-219ENST00000525685 SLC31A2O15432 143 aa2.55□□□□□ -2
CD44-219ENST00000525685 MAGEB4O15481 346 aaPredicted RBP2.55□□□□□ -2
CD44-219ENST00000525685 TIMM8AO60220 97 aaPredicted RBP2.55□□□□□ -2
CD44-219ENST00000525685 DSCAMO60469 2012 aa2.55□□□□□ -2
CD44-219ENST00000525685 GMDSO60547 372 aa2.55□□□□□ -2
CD44-219ENST00000525685 ENTPD6O75354 484 aa2.55□□□□□ -2
CD44-219ENST00000525685 ATP6V1G2O95670 118 aa2.55□□□□□ -2
CD44-219ENST00000525685 CLIC3O95833 236 aa2.55□□□□□ -2
CD44-219ENST00000525685 IGLV3-1P01715 115 aa2.55□□□□□ -2
CD44-219ENST00000525685 CSF3P09919 207 aa2.55□□□□□ -2
CD44-219ENST00000525685 DBTP11182 482 aaKnown RBP2.55□□□□□ -2
CD44-219ENST00000525685 NQO2P16083 231 aa2.55□□□□□ -2
CD44-219ENST00000525685 KIR2DS4P43632 304 aa2.55□□□□□ -2
CD44-219ENST00000525685 RPS10P46783 165 aaKnown RBP2.55□□□□□ -2
CD44-219ENST00000525685 TGM4P49221 684 aa2.55□□□□□ -2
CD44-219ENST00000525685 EVX1P49640 407 aa2.55□□□□□ -2
CD44-219ENST00000525685 BCAP31P51572 246 aa2.55□□□□□ -2
CD44-219ENST00000525685 EFNA4P52798 201 aa2.55□□□□□ -2
CD44-219ENST00000525685 AQP4P55087 323 aa2.55□□□□□ -2
CD44-219ENST00000525685 ZNF121P58317 390 aaPredicted RBP2.55□□□□□ -2
CD44-219ENST00000525685 AP3S2P59780 193 aa2.55□□□□□ -2
CD44-219ENST00000525685 CXCR4P61073 352 aa2.55□□□□□ -2
CD44-219ENST00000525685 SNRPGP62308 76 aaKnown RBP2.55□□□□□ -2
CD44-219ENST00000525685 ARF6P62330 175 aa2.55□□□□□ -2
CD44-219ENST00000525685 ADARB1P78563 741 aaKnown RBP2.55□□□□□ -2
CD44-219ENST00000525685 IL5RAQ01344 420 aa2.55□□□□□ -2
CD44-219ENST00000525685 FLI1Q01543 452 aaPredicted RBP2.55□□□□□ -2
CD44-219ENST00000525685 ZNF92Q03936 586 aa2.55□□□□□ -2
CD44-219ENST00000525685 BAMBIQ13145 260 aa2.55□□□□□ -2
CD44-219ENST00000525685 OXA1LQ15070 435 aa2.55□□□□□ -2
CD44-219ENST00000525685 SPRNQ5BIV9 151 aa2.55□□□□□ -2
CD44-219ENST00000525685 C1orf100Q5SVJ3 147 aa2.55□□□□□ -2
CD44-219ENST00000525685 OR2T2Q6IF00 324 aa2.55□□□□□ -2
CD44-219ENST00000525685 ARL9Q6T311 187 aa2.55□□□□□ -2
CD44-219ENST00000525685 ZNF322Q6U7Q0 402 aaPredicted RBP2.55□□□□□ -2
CD44-219ENST00000525685 DRAM2Q6UX65 266 aa2.55□□□□□ -2
CD44-219ENST00000525685 FBXW12Q6X9E4 464 aa2.55□□□□□ -2
CD44-219ENST00000525685 Q6ZR03 302 aa2.55□□□□□ -2
CD44-219ENST00000525685 MRPL21Q7Z2W9 205 aaKnown RBP2.55□□□□□ -2
CD44-219ENST00000525685 C1orf174Q8IYL3 243 aa2.55□□□□□ -2
CD44-219ENST00000525685 RDH10Q8IZV5 341 aa2.55□□□□□ -2
CD44-219ENST00000525685 OR5AS1Q8N127 324 aa2.55□□□□□ -2
CD44-219ENST00000525685 ZNF283Q8N7M2 679 aa2.55□□□□□ -2
CD44-219ENST00000525685 ZNF555Q8NEP9 628 aa2.55□□□□□ -2
CD44-219ENST00000525685 OR10AD1Q8NGE0 317 aa2.55□□□□□ -2
CD44-219ENST00000525685 OR8B12Q8NGG6 310 aa2.55□□□□□ -2
CD44-219ENST00000525685 OR5L1Q8NGL2 311 aa2.55□□□□□ -2
CD44-219ENST00000525685 OR2AE1Q8NHA4 323 aa2.55□□□□□ -2
CD44-219ENST00000525685 C10orf105Q8TEF2 133 aa2.55□□□□□ -2
CD44-219ENST00000525685 THEM6Q8WUY1 208 aa2.55□□□□□ -2
CD44-219ENST00000525685 CYGBQ8WWM9 190 aa2.55□□□□□ -2
CD44-219ENST00000525685 ARPC1AQ92747 370 aa2.55□□□□□ -2
CD44-219ENST00000525685 RAB1CQ92928 201 aa2.55□□□□□ -2
CD44-219ENST00000525685 BORCS5Q969J3 196 aa2.55□□□□□ -2
CD44-219ENST00000525685 CMBLQ96DG6 245 aa2.55□□□□□ -2
CD44-219ENST00000525685 TIMD4Q96H15 378 aa2.55□□□□□ -2
CD44-219ENST00000525685 REEP6Q96HR9 211 aa2.55□□□□□ -2
CD44-219ENST00000525685 RNF2Q99496 336 aa2.55□□□□□ -2
CD44-219ENST00000525685 TBX5Q99593 518 aa2.55□□□□□ -2
CD44-219ENST00000525685 TEAD3Q99594 435 aa2.55□□□□□ -2
CD44-219ENST00000525685 C12orf57Q99622 126 aa2.55□□□□□ -2
CD44-219ENST00000525685 BPESC1Q9GZL8 116 aa2.55□□□□□ -2
CD44-219ENST00000525685 RAB1BQ9H0U4 201 aa2.55□□□□□ -2
CD44-219ENST00000525685 GAL3ST2Q9H3Q3 398 aa2.55□□□□□ -2
CD44-219ENST00000525685 NIPAL2Q9H841 368 aa2.55□□□□□ -2
CD44-219ENST00000525685 ZNF331Q9NQX6 463 aaPredicted RBP2.55□□□□□ -2
CD44-219ENST00000525685 ZC4H2Q9NQZ6 224 aa2.55□□□□□ -2
CD44-219ENST00000525685 CLN6Q9NWW5 311 aa2.55□□□□□ -2
CD44-219ENST00000525685 FAM206AQ9NX38 181 aa2.55□□□□□ -2
CD44-219ENST00000525685 MRM2Q9UI43 246 aaKnown RBP2.55□□□□□ -2
CD44-219ENST00000525685 IKZF2Q9UKS7 526 aa2.55□□□□□ -2
CD44-219ENST00000525685 ADGRG4Q8IZF6 3080 aa2.55□□□□□ -2
CD44-219ENST00000525685 LRRK2Q5S007 2527 aa2.54□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms