RNA–Protein interactions for RNA: ENST00000524895.5

TSPAN4-213, Transcript of tetraspanin 4, humanhuman

TSL 4

Gene TSPAN4, Length 401 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-213ENST00000524895 RRNAD1Q96FB5 475 aaKnown RBP12.7□□□□□ -0.38
TSPAN4-213ENST00000524895 ZNF48Q96MX3 618 aaPredicted RBP12.7□□□□□ -0.38
TSPAN4-213ENST00000524895 TSNAXQ99598 290 aaKnown RBP12.7□□□□□ -0.38
TSPAN4-213ENST00000524895 RNF5Q99942 180 aa12.7□□□□□ -0.38
TSPAN4-213ENST00000524895 MED28Q9H204 178 aa12.7□□□□□ -0.38
TSPAN4-213ENST00000524895 BTBD17A6NE02 478 aa12.69□□□□□ -0.38
TSPAN4-213ENST00000524895 IFNA21P01568 189 aa12.69□□□□□ -0.38
TSPAN4-213ENST00000524895 HOXB5P09067 269 aa12.69□□□□□ -0.38
TSPAN4-213ENST00000524895 LGALS7P47929 136 aa12.69□□□□□ -0.38
TSPAN4-213ENST00000524895 EBI3Q14213 229 aa12.69□□□□□ -0.38
TSPAN4-213ENST00000524895 MMDQ15546 238 aa12.69□□□□□ -0.38
TSPAN4-213ENST00000524895 VMA21Q3ZAQ7 101 aa12.69□□□□□ -0.38
TSPAN4-213ENST00000524895 RBMS3Q6XE24 437 aaKnown RBP12.69□□□□□ -0.38
TSPAN4-213ENST00000524895 SSX9Q7RTT3 188 aa12.69□□□□□ -0.38
TSPAN4-213ENST00000524895 LYZL2Q7Z4W2 148 aa12.69□□□□□ -0.38
TSPAN4-213ENST00000524895 VKORC1L1Q8N0U8 176 aa12.69□□□□□ -0.38
TSPAN4-213ENST00000524895 SIGLECL1Q8N7X8 197 aa12.69□□□□□ -0.38
TSPAN4-213ENST00000524895 SEC22AQ96IW7 307 aa12.69□□□□□ -0.38
TSPAN4-213ENST00000524895 RITA1Q96K30 269 aa12.69□□□□□ -0.38
TSPAN4-213ENST00000524895 RHOVQ96L33 236 aa12.69□□□□□ -0.38
TSPAN4-213ENST00000524895 A0A1B0GVG6 124 aa12.68□□□□□ -0.38
TSPAN4-213ENST00000524895 DBX1A6NMT0 343 aa12.68□□□□□ -0.38
TSPAN4-213ENST00000524895 GOSR2O14653 212 aa12.68□□□□□ -0.38
TSPAN4-213ENST00000524895 ADAP1O75689 374 aa12.68□□□□□ -0.38
TSPAN4-213ENST00000524895 SPDEFO95238 335 aa12.68□□□□□ -0.38
TSPAN4-213ENST00000524895 IGKV1-5P01602 117 aa12.68□□□□□ -0.38
TSPAN4-213ENST00000524895 IGHV4-59P01825 116 aa12.68□□□□□ -0.38
TSPAN4-213ENST00000524895 VDAC1P21796 283 aa12.68□□□□□ -0.38
TSPAN4-213ENST00000524895 LY6EQ16553 131 aa12.68□□□□□ -0.38
TSPAN4-213ENST00000524895 FBLN7Q53RD9 439 aa12.68□□□□□ -0.38
TSPAN4-213ENST00000524895 Q6YL49 198 aa12.68□□□□□ -0.38
TSPAN4-213ENST00000524895 H2BFWTQ7Z2G1 175 aa12.68□□□□□ -0.38
TSPAN4-213ENST00000524895 Q8N6K4 173 aa12.68□□□□□ -0.38
TSPAN4-213ENST00000524895 OR5R1Q8NH85 324 aa12.68□□□□□ -0.38
TSPAN4-213ENST00000524895 PIFOQ8TCI5 191 aa12.68□□□□□ -0.38
TSPAN4-213ENST00000524895 SSMEM1Q8WWF3 244 aa12.68□□□□□ -0.38
TSPAN4-213ENST00000524895 PRDM13Q9H4Q3 707 aa12.68□□□□□ -0.38
TSPAN4-213ENST00000524895 RAB18Q9NP72 206 aa12.68□□□□□ -0.38
TSPAN4-213ENST00000524895 TMEM140Q9NV12 185 aa12.68□□□□□ -0.38
TSPAN4-213ENST00000524895 KIAA1456Q9P272 454 aa12.68□□□□□ -0.38
TSPAN4-213ENST00000524895 MGAT4CQ9UBM8 478 aa12.68□□□□□ -0.38
TSPAN4-213ENST00000524895 PITPNC1Q9UKF7 332 aa12.68□□□□□ -0.38
TSPAN4-213ENST00000524895 TCF19Q9Y242 345 aa12.68□□□□□ -0.38
TSPAN4-213ENST00000524895 TMED3Q9Y3Q3 217 aa12.68□□□□□ -0.38
TSPAN4-213ENST00000524895 HIVEP2P31629 2446 aa12.67□□□□□ -0.38
TSPAN4-213ENST00000524895 SRRM4A7MD48 611 aaKnown RBP12.67□□□□□ -0.38
TSPAN4-213ENST00000524895 FAM25EA8MYX2 175 aa12.67□□□□□ -0.38
TSPAN4-213ENST00000524895 CCSO14618 274 aa12.67□□□□□ -0.38
TSPAN4-213ENST00000524895 NBR2O15453 112 aa12.67□□□□□ -0.38
TSPAN4-213ENST00000524895 SLC25A17O43808 307 aa12.67□□□□□ -0.38
TSPAN4-213ENST00000524895 IGLV2-23P01705 113 aa12.67□□□□□ -0.38
TSPAN4-213ENST00000524895 SAA1P0DJI8 122 aaPredicted RBP12.67□□□□□ -0.38
TSPAN4-213ENST00000524895 CNTFRP26992 372 aa12.67□□□□□ -0.38
TSPAN4-213ENST00000524895 IER3P46695 156 aa12.67□□□□□ -0.38
TSPAN4-213ENST00000524895 UBE2KP61086 200 aa12.67□□□□□ -0.38
TSPAN4-213ENST00000524895 RRAS2P62070 204 aaPredicted RBP12.67□□□□□ -0.38
TSPAN4-213ENST00000524895 POU2AF1Q16633 256 aa12.67□□□□□ -0.38
TSPAN4-213ENST00000524895 GGNBP1Q5YKI7 109 aa12.67□□□□□ -0.38
TSPAN4-213ENST00000524895 OR4A47Q6IF82 309 aa12.67□□□□□ -0.38
TSPAN4-213ENST00000524895 FAM219AQ8IW50 185 aa12.67□□□□□ -0.38
TSPAN4-213ENST00000524895 OR8H1Q8NGG4 311 aa12.67□□□□□ -0.38
TSPAN4-213ENST00000524895 VSTM2AQ8TAG5 236 aa12.67□□□□□ -0.38
TSPAN4-213ENST00000524895 LSM10Q969L4 123 aaKnown RBP12.67□□□□□ -0.38
TSPAN4-213ENST00000524895 MMP24Q9Y5R2 645 aa12.67□□□□□ -0.38
TSPAN4-213ENST00000524895 A0A0G2JRQ6 117 aa12.66□□□□□ -0.38
TSPAN4-213ENST00000524895 NCBP2LA6PVI3 153 aaKnown RBP12.66□□□□□ -0.38
TSPAN4-213ENST00000524895 HOXA3O43365 443 aaPredicted RBP12.66□□□□□ -0.38
TSPAN4-213ENST00000524895 OR2A4O95047 310 aa12.66□□□□□ -0.38
TSPAN4-213ENST00000524895 F2RL1P55085 397 aa12.66□□□□□ -0.38
TSPAN4-213ENST00000524895 PLGLAQ15195 96 aa12.66□□□□□ -0.38
TSPAN4-213ENST00000524895 PSG5Q15238 335 aa12.66□□□□□ -0.38
TSPAN4-213ENST00000524895 FCN2Q15485 313 aa12.66□□□□□ -0.38
TSPAN4-213ENST00000524895 NMSQ5H8A3 153 aa12.66□□□□□ -0.38
TSPAN4-213ENST00000524895 THOC7Q6I9Y2 204 aaKnown RBP12.66□□□□□ -0.38
TSPAN4-213ENST00000524895 TMEM219Q86XT9 240 aa12.66□□□□□ -0.38
TSPAN4-213ENST00000524895 OR5M8Q8NGP6 311 aa12.66□□□□□ -0.38
TSPAN4-213ENST00000524895 OR2A7Q96R45 310 aa12.66□□□□□ -0.38
TSPAN4-213ENST00000524895 SPIN2AQ99865 258 aa12.66□□□□□ -0.38
TSPAN4-213ENST00000524895 SPIN2BQ9BPZ2 258 aa12.66□□□□□ -0.38
TSPAN4-213ENST00000524895 SLC25A33Q9BSK2 321 aa12.66□□□□□ -0.38
TSPAN4-213ENST00000524895 C1RLQ9NZP8 487 aa12.66□□□□□ -0.38
TSPAN4-213ENST00000524895 METTL1Q9UBP6 276 aaKnown RBP12.66□□□□□ -0.38
TSPAN4-213ENST00000524895 SONP18583 2426 aaKnown RBP12.66□□□□□ -0.38
TSPAN4-213ENST00000524895 MAST4O15021 2626 aa12.65□□□□□ -0.38
TSPAN4-213ENST00000524895 MXRA5Q9NR99 2828 aa12.65□□□□□ -0.38
TSPAN4-213ENST00000524895 C13orf42A0A1B0GVH6 325 aa12.65□□□□□ -0.38
TSPAN4-213ENST00000524895 C5orf51A6NDU8 294 aa12.65□□□□□ -0.38
TSPAN4-213ENST00000524895 A6NDX4 124 aa12.65□□□□□ -0.38
TSPAN4-213ENST00000524895 RRHO14718 337 aa12.65□□□□□ -0.38
TSPAN4-213ENST00000524895 KBTBD11O94819 623 aa12.65□□□□□ -0.38
TSPAN4-213ENST00000524895 OR2F2O95006 317 aa12.65□□□□□ -0.38
TSPAN4-213ENST00000524895 P0C879 139 aa12.65□□□□□ -0.38
TSPAN4-213ENST00000524895 SULT1A3P0DMM9 295 aa12.65□□□□□ -0.38
TSPAN4-213ENST00000524895 SULT1A4P0DMN0 295 aa12.65□□□□□ -0.38
TSPAN4-213ENST00000524895 IZUMO4Q1ZYL8 232 aa12.65□□□□□ -0.38
TSPAN4-213ENST00000524895 C2orf68Q2NKX9 166 aa12.65□□□□□ -0.38
TSPAN4-213ENST00000524895 TUSC1Q2TAM9 212 aa12.65□□□□□ -0.38
TSPAN4-213ENST00000524895 GSG1LQ6UXU4 331 aa12.65□□□□□ -0.38
TSPAN4-213ENST00000524895 PUSL1Q8N0Z8 303 aaKnown RBP12.65□□□□□ -0.38
TSPAN4-213ENST00000524895 CADM3Q8N126 398 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms