RNA–Protein interactions for RNA: ENST00000524165.5

PVT1-220, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 458 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-220ENST00000524165 FANCD2OSQ96PS1 177 aa12.64□□□□□ -0.39
PVT1-220ENST00000524165 ZNF430Q9H8G1 570 aaPredicted RBP12.64□□□□□ -0.39
PVT1-220ENST00000524165 CHMP1AQ9HD42 196 aaPredicted RBP12.64□□□□□ -0.39
PVT1-220ENST00000524165 ERVK13-1Q9NX77 482 aa12.64□□□□□ -0.39
PVT1-220ENST00000524165 CKLFQ9UBR5 152 aa12.64□□□□□ -0.39
PVT1-220ENST00000524165 KLK9Q9UKQ9 250 aa12.64□□□□□ -0.39
PVT1-220ENST00000524165 IGHV4-28A0A0C4DH34 117 aa12.63□□□□□ -0.39
PVT1-220ENST00000524165 EPM2AB3EWF7 344 aa12.63□□□□□ -0.39
PVT1-220ENST00000524165 INAFM2P0DMQ5 153 aa12.63□□□□□ -0.39
PVT1-220ENST00000524165 TNP2Q05952 138 aa12.63□□□□□ -0.39
PVT1-220ENST00000524165 CEACAM19Q7Z692 300 aa12.63□□□□□ -0.39
PVT1-220ENST00000524165 MMD2Q8IY49 270 aa12.63□□□□□ -0.39
PVT1-220ENST00000524165 ZNF436Q9C0F3 470 aaPredicted RBP12.63□□□□□ -0.39
PVT1-220ENST00000524165 NACAE9PAV3 2078 aa12.62□□□□□ -0.39
PVT1-220ENST00000524165 TRBV6-6A0A0A6YYG2 114 aa12.62□□□□□ -0.39
PVT1-220ENST00000524165 TCRBV3S1A0A5B6 114 aa12.62□□□□□ -0.39
PVT1-220ENST00000524165 SNTNA6NMZ2 147 aa12.62□□□□□ -0.39
PVT1-220ENST00000524165 C15orf61A6NNL5 157 aa12.62□□□□□ -0.39
PVT1-220ENST00000524165 MIFP14174 115 aa12.62□□□□□ -0.39
PVT1-220ENST00000524165 HLA-DRB3P79483 266 aa12.62□□□□□ -0.39
PVT1-220ENST00000524165 TPBGQ13641 420 aa12.62□□□□□ -0.39
PVT1-220ENST00000524165 CCDC58Q4VC31 144 aa12.62□□□□□ -0.39
PVT1-220ENST00000524165 C10orf55Q5SWW7 151 aa12.62□□□□□ -0.39
PVT1-220ENST00000524165 RPL22L1Q6P5R6 122 aaKnown RBP12.62□□□□□ -0.39
PVT1-220ENST00000524165 C19orf35Q6ZS72 473 aa12.62□□□□□ -0.39
PVT1-220ENST00000524165 C6orf201Q7Z4U5 140 aa12.62□□□□□ -0.39
PVT1-220ENST00000524165 UBE2DNLQ8IWF7 75 aa12.62□□□□□ -0.39
PVT1-220ENST00000524165 THTPAQ9BU02 230 aa12.62□□□□□ -0.39
PVT1-220ENST00000524165 FAM107BQ9H098 131 aa12.62□□□□□ -0.39
PVT1-220ENST00000524165 RIMS4Q9H426 269 aaPredicted RBP12.62□□□□□ -0.39
PVT1-220ENST00000524165 DAZ1Q9NQZ3 744 aaKnown RBP12.62□□□□□ -0.39
PVT1-220ENST00000524165 MGAT4AQ9UM21 535 aa12.62□□□□□ -0.39
PVT1-220ENST00000524165 TRAV8-7A0A075B6U6 113 aa12.61□□□□□ -0.39
PVT1-220ENST00000524165 HMX3A6NHT5 357 aa12.61□□□□□ -0.39
PVT1-220ENST00000524165 TEX22C9J3V5 150 aa12.61□□□□□ -0.39
PVT1-220ENST00000524165 MRPS14O60783 128 aaKnown RBP12.61□□□□□ -0.39
PVT1-220ENST00000524165 DCTN3O75935 186 aa12.61□□□□□ -0.39
PVT1-220ENST00000524165 DHFRP00374 187 aa12.61□□□□□ -0.39
PVT1-220ENST00000524165 HIST1H1BP16401 226 aaKnown RBP12.61□□□□□ -0.39
PVT1-220ENST00000524165 CDK10Q15131 360 aa12.61□□□□□ -0.39
PVT1-220ENST00000524165 OSR1Q8TAX0 266 aaPredicted RBP12.61□□□□□ -0.39
PVT1-220ENST00000524165 TMEM190Q8WZ59 177 aa12.61□□□□□ -0.39
PVT1-220ENST00000524165 CXorf58Q96LI9 332 aa12.61□□□□□ -0.39
PVT1-220ENST00000524165 FYTTD1Q96QD9 318 aaKnown RBP12.61□□□□□ -0.39
PVT1-220ENST00000524165 CHRDL1Q9BU40 450 aa12.61□□□□□ -0.39
PVT1-220ENST00000524165 SDHAF2Q9NX18 166 aa12.61□□□□□ -0.39
PVT1-220ENST00000524165 MYCBP2O75592 4640 aa12.61□□□□□ -0.39
PVT1-220ENST00000524165 DPPA5A6NC42 116 aa12.6□□□□□ -0.39
PVT1-220ENST00000524165 CRYGCP07315 174 aa12.6□□□□□ -0.39
PVT1-220ENST00000524165 CTSDP07339 412 aaPredicted RBP12.6□□□□□ -0.39
PVT1-220ENST00000524165 RDH8Q9NYR8 311 aa12.6□□□□□ -0.39
PVT1-220ENST00000524165 GHRLQ9UBU3 117 aa12.6□□□□□ -0.39
PVT1-220ENST00000524165 ELOA3CA0A087WX78 387 aaPredicted RBP12.59□□□□□ -0.39
PVT1-220ENST00000524165 IGHV3-35A0A0C4DH35 117 aa12.59□□□□□ -0.39
PVT1-220ENST00000524165 TRBV5-5A0A0J9YX44 114 aa12.59□□□□□ -0.39
PVT1-220ENST00000524165 CRYZL1O95825 349 aa12.59□□□□□ -0.39
PVT1-220ENST00000524165 SAA1P0DJI8 122 aaPredicted RBP12.59□□□□□ -0.39
PVT1-220ENST00000524165 FLOT2Q14254 428 aa12.59□□□□□ -0.39
PVT1-220ENST00000524165 XAF1Q6GPH4 301 aa12.59□□□□□ -0.39
PVT1-220ENST00000524165 PLET1Q6UQ28 207 aa12.59□□□□□ -0.39
PVT1-220ENST00000524165 OR2D2Q9H210 308 aa12.59□□□□□ -0.39
PVT1-220ENST00000524165 SLC2A9Q9NRM0 540 aa12.59□□□□□ -0.39
PVT1-220ENST00000524165 MFSD2BA6NFX1 497 aa12.58□□□□□ -0.4
PVT1-220ENST00000524165 GPR183P32249 361 aa12.58□□□□□ -0.4
PVT1-220ENST00000524165 IRF3Q14653 427 aa12.58□□□□□ -0.4
PVT1-220ENST00000524165 ATP6AP1Q15904 470 aa12.58□□□□□ -0.4
PVT1-220ENST00000524165 C12orf74Q32Q52 190 aa12.58□□□□□ -0.4
PVT1-220ENST00000524165 RNF212Q495C1 297 aa12.58□□□□□ -0.4
PVT1-220ENST00000524165 ZNF367Q7RTV3 350 aa12.58□□□□□ -0.4
PVT1-220ENST00000524165 ARL2BPQ9Y2Y0 163 aa12.58□□□□□ -0.4
PVT1-220ENST00000524165 ETV7Q9Y603 341 aa12.58□□□□□ -0.4
PVT1-220ENST00000524165 IGKV1-6A0A0C4DH72 117 aa12.57□□□□□ -0.4
PVT1-220ENST00000524165 IL6RP08887 468 aaPredicted RBP12.57□□□□□ -0.4
PVT1-220ENST00000524165 Q499Y3 187 aa12.57□□□□□ -0.4
PVT1-220ENST00000524165 LIPKQ5VXJ0 399 aa12.57□□□□□ -0.4
PVT1-220ENST00000524165 ZNF502Q8TBZ5 544 aa12.57□□□□□ -0.4
PVT1-220ENST00000524165 SMIM19Q96E16 107 aa12.57□□□□□ -0.4
PVT1-220ENST00000524165 ADTRPQ96IZ2 230 aa12.57□□□□□ -0.4
PVT1-220ENST00000524165 ARGLU1Q9NWB6 273 aaPredicted RBP12.57□□□□□ -0.4
PVT1-220ENST00000524165 IGLV11-55A0A075B6I3 123 aa12.56□□□□□ -0.4
PVT1-220ENST00000524165 ZNF705EA8MWA4 302 aaPredicted RBP12.56□□□□□ -0.4
PVT1-220ENST00000524165 RPS27AP62979 156 aaKnown RBP12.56□□□□□ -0.4
PVT1-220ENST00000524165 TMEM41BQ5BJD5 291 aa12.56□□□□□ -0.4
PVT1-220ENST00000524165 C5orf30Q96GV9 206 aa12.56□□□□□ -0.4
PVT1-220ENST00000524165 UQCC2Q9BRT2 126 aa12.56□□□□□ -0.4
PVT1-220ENST00000524165 SCRT1Q9BWW7 348 aa12.56□□□□□ -0.4
PVT1-220ENST00000524165 Q9N2K0 584 aa12.56□□□□□ -0.4
PVT1-220ENST00000524165 K7EMT4 169 aa12.55□□□□□ -0.4
PVT1-220ENST00000524165 ZNF735P0CB33 412 aa12.55□□□□□ -0.4
PVT1-220ENST00000524165 AREGP15514 252 aa12.55□□□□□ -0.4
PVT1-220ENST00000524165 RPA2P15927 270 aa12.55□□□□□ -0.4
PVT1-220ENST00000524165 CALB2P22676 271 aa12.55□□□□□ -0.4
PVT1-220ENST00000524165 HTR2CP28335 458 aa12.55□□□□□ -0.4
PVT1-220ENST00000524165 RPL27AP46776 148 aaKnown RBP12.55□□□□□ -0.4
PVT1-220ENST00000524165 SERPINB10P48595 397 aa12.55□□□□□ -0.4
PVT1-220ENST00000524165 SSX9Q7RTT3 188 aa12.55□□□□□ -0.4
PVT1-220ENST00000524165 PLEKHJ1Q9NW61 149 aa12.55□□□□□ -0.4
PVT1-220ENST00000524165 CELA1Q9UNI1 258 aa12.55□□□□□ -0.4
PVT1-220ENST00000524165 FLG2Q5D862 2391 aaPredicted RBP12.54□□□□□ -0.4
PVT1-220ENST00000524165 E7EUB6 86 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms