RNA–Protein interactions for RNA: ENST00000523237.1

CLN8-206, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 3

Gene CLN8, Length 835 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-206ENST00000523237 AIREO43918 545 aa12.49□□□□□ -0.41
CLN8-206ENST00000523237 TNFAIP8O95379 198 aa12.49□□□□□ -0.41
CLN8-206ENST00000523237 SAA1P0DJI8 122 aaPredicted RBP12.49□□□□□ -0.41
CLN8-206ENST00000523237 ZP3P21754 424 aa12.49□□□□□ -0.41
CLN8-206ENST00000523237 RPL30P62888 115 aaKnown RBP12.49□□□□□ -0.41
CLN8-206ENST00000523237 OR2B11Q5JQS5 317 aa12.49□□□□□ -0.41
CLN8-206ENST00000523237 GVQW1Q8N7I0 195 aa12.49□□□□□ -0.41
CLN8-206ENST00000523237 TSPAN14Q8NG11 270 aa12.49□□□□□ -0.41
CLN8-206ENST00000523237 OR4S2Q8NH73 311 aa12.49□□□□□ -0.41
CLN8-206ENST00000523237 TCTEX1D2Q8WW35 142 aa12.49□□□□□ -0.41
CLN8-206ENST00000523237 AUNIPQ9H7T9 357 aa12.49□□□□□ -0.41
CLN8-206ENST00000523237 ZNF430Q9H8G1 570 aaPredicted RBP12.49□□□□□ -0.41
CLN8-206ENST00000523237 TNCP24821 2201 aa12.49□□□□□ -0.41
CLN8-206ENST00000523237 MPPED1O15442 326 aa12.48□□□□□ -0.41
CLN8-206ENST00000523237 OR9G9P0C7N8 305 aa12.48□□□□□ -0.41
CLN8-206ENST00000523237 NHLRC4P0CG21 123 aaPredicted RBP12.48□□□□□ -0.41
CLN8-206ENST00000523237 APELAP0DMC3 54 aa12.48□□□□□ -0.41
CLN8-206ENST00000523237 FCGR2CP31995 323 aa12.48□□□□□ -0.41
CLN8-206ENST00000523237 TGFBR1P36897 503 aa12.48□□□□□ -0.41
CLN8-206ENST00000523237 CBX5P45973 191 aa12.48□□□□□ -0.41
CLN8-206ENST00000523237 ZNF66Q6ZN08 573 aa12.48□□□□□ -0.41
CLN8-206ENST00000523237 MMD2Q8IY49 270 aa12.48□□□□□ -0.41
CLN8-206ENST00000523237 OR6Q1Q8NGQ2 317 aa12.48□□□□□ -0.41
CLN8-206ENST00000523237 VSTM2AQ8TAG5 236 aa12.48□□□□□ -0.41
CLN8-206ENST00000523237 YIPF6Q96EC8 236 aa12.48□□□□□ -0.41
CLN8-206ENST00000523237 USMG5Q96IX5 58 aa12.48□□□□□ -0.41
CLN8-206ENST00000523237 OR4C12Q96R67 309 aa12.48□□□□□ -0.41
CLN8-206ENST00000523237 ELOVL1Q9BW60 279 aa12.48□□□□□ -0.41
CLN8-206ENST00000523237 ANKRD34BA5PLL1 514 aa12.47□□□□□ -0.41
CLN8-206ENST00000523237 EIF4EBP1Q13541 118 aaPredicted RBP12.47□□□□□ -0.41
CLN8-206ENST00000523237 MSMO1Q15800 293 aa12.47□□□□□ -0.41
CLN8-206ENST00000523237 MFSD4AQ8N468 514 aa12.47□□□□□ -0.41
CLN8-206ENST00000523237 ADAD2Q8NCV1 583 aaKnown RBP12.47□□□□□ -0.41
CLN8-206ENST00000523237 OR13F1Q8NGS4 319 aa12.47□□□□□ -0.41
CLN8-206ENST00000523237 SECTM1Q8WVN6 248 aa12.47□□□□□ -0.41
CLN8-206ENST00000523237 S100A16Q96FQ6 103 aaKnown RBP12.47□□□□□ -0.41
CLN8-206ENST00000523237 SPIN2AQ99865 258 aa12.47□□□□□ -0.41
CLN8-206ENST00000523237 SPIN2BQ9BPZ2 258 aa12.47□□□□□ -0.41
CLN8-206ENST00000523237 TAS2R8Q9NYW2 309 aa12.47□□□□□ -0.41
CLN8-206ENST00000523237 SMAD5-AS1Q9Y6J3 95 aa12.47□□□□□ -0.41
CLN8-206ENST00000523237 XRCC3O43542 346 aa12.46□□□□□ -0.41
CLN8-206ENST00000523237 PPYP01298 95 aa12.46□□□□□ -0.41
CLN8-206ENST00000523237 PTHLHP12272 177 aa12.46□□□□□ -0.41
CLN8-206ENST00000523237 SPNP16150 400 aa12.46□□□□□ -0.41
CLN8-206ENST00000523237 RPS19P39019 145 aaKnown RBP12.46□□□□□ -0.41
CLN8-206ENST00000523237 LSM3P62310 102 aaKnown RBP12.46□□□□□ -0.41
CLN8-206ENST00000523237 DEFA5Q01523 94 aa12.46□□□□□ -0.41
CLN8-206ENST00000523237 UBE2NLQ5JXB2 153 aa12.46□□□□□ -0.41
CLN8-206ENST00000523237 ZNF343Q6P1L6 599 aa12.46□□□□□ -0.41
CLN8-206ENST00000523237 OR5AP2Q8NGF4 316 aa12.46□□□□□ -0.41
CLN8-206ENST00000523237 PEF1Q9UBV8 284 aaKnown RBP12.46□□□□□ -0.41
CLN8-206ENST00000523237 KBTBD11O94819 623 aa12.45□□□□□ -0.42
CLN8-206ENST00000523237 OR2A4O95047 310 aa12.45□□□□□ -0.42
CLN8-206ENST00000523237 FCER2P06734 321 aa12.45□□□□□ -0.42
CLN8-206ENST00000523237 GP9P14770 177 aa12.45□□□□□ -0.42
CLN8-206ENST00000523237 KIR2DS2P43631 304 aa12.45□□□□□ -0.42
CLN8-206ENST00000523237 DYRK1AQ13627 763 aa12.45□□□□□ -0.42
CLN8-206ENST00000523237 VKORC1L1Q8N0U8 176 aa12.45□□□□□ -0.42
CLN8-206ENST00000523237 ZBTB34Q8NCN2 500 aa12.45□□□□□ -0.42
CLN8-206ENST00000523237 OR2A7Q96R45 310 aa12.45□□□□□ -0.42
CLN8-206ENST00000523237 RSRP1Q9BUV0 290 aa12.45□□□□□ -0.42
CLN8-206ENST00000523237 IFT46Q9NQC8 304 aa12.45□□□□□ -0.42
CLN8-206ENST00000523237 CCL28Q9NRJ3 127 aa12.45□□□□□ -0.42
CLN8-206ENST00000523237 FAM223BA6NKX1 122 aa12.44□□□□□ -0.42
CLN8-206ENST00000523237 TNFSF12O43508 249 aa12.44□□□□□ -0.42
CLN8-206ENST00000523237 HRASP01112 189 aa12.44□□□□□ -0.42
CLN8-206ENST00000523237 BRWD1-AS2P59051 145 aa12.44□□□□□ -0.42
CLN8-206ENST00000523237 KLF5Q13887 457 aaPredicted RBP12.44□□□□□ -0.42
CLN8-206ENST00000523237 C10orf55Q5SWW7 151 aa12.44□□□□□ -0.42
CLN8-206ENST00000523237 SLC25A42Q86VD7 318 aa12.44□□□□□ -0.42
CLN8-206ENST00000523237 FAM223AQ8IWN6 122 aa12.44□□□□□ -0.42
CLN8-206ENST00000523237 PUSL1Q8N0Z8 303 aaKnown RBP12.44□□□□□ -0.42
CLN8-206ENST00000523237 TTC9CQ8N5M4 171 aa12.44□□□□□ -0.42
CLN8-206ENST00000523237 SAMD12Q8N8I0 201 aa12.44□□□□□ -0.42
CLN8-206ENST00000523237 TMEM167AQ8TBQ9 72 aa12.44□□□□□ -0.42
CLN8-206ENST00000523237 GIMAP1Q8WWP7 306 aa12.44□□□□□ -0.42
CLN8-206ENST00000523237 SNAPC3Q92966 411 aa12.44□□□□□ -0.42
CLN8-206ENST00000523237 SLC5A7Q9GZV3 580 aa12.44□□□□□ -0.42
CLN8-206ENST00000523237 MEIS3P1A6NDR6 274 aa12.43□□□□□ -0.42
CLN8-206ENST00000523237 MAS1LP35410 378 aa12.43□□□□□ -0.42
CLN8-206ENST00000523237 FXYD4P59646 89 aa12.43□□□□□ -0.42
CLN8-206ENST00000523237 RHOGP84095 191 aa12.43□□□□□ -0.42
CLN8-206ENST00000523237 CATR1Q13166 79 aa12.43□□□□□ -0.42
CLN8-206ENST00000523237 TATDN3Q17R31 274 aa12.43□□□□□ -0.42
CLN8-206ENST00000523237 TMEM69Q5SWH9 247 aa12.43□□□□□ -0.42
CLN8-206ENST00000523237 ANKRD13BQ86YJ7 626 aa12.43□□□□□ -0.42
CLN8-206ENST00000523237 OR9G4Q8NGQ1 327 aa12.43□□□□□ -0.42
CLN8-206ENST00000523237 KCTD12Q96CX2 325 aaKnown RBP12.43□□□□□ -0.42
CLN8-206ENST00000523237 WWC2-AS2Q96NR7 200 aa12.43□□□□□ -0.42
CLN8-206ENST00000523237 GPHA2Q96T91 129 aa12.43□□□□□ -0.42
CLN8-206ENST00000523237 AIFM2Q9BRQ8 373 aa12.43□□□□□ -0.42
CLN8-206ENST00000523237 TRBV9A0A0B4J1U6 114 aa12.42□□□□□ -0.42
CLN8-206ENST00000523237 RBMXL2O75526 392 aaKnown RBP12.42□□□□□ -0.42
CLN8-206ENST00000523237 IGLV1-51P01701 117 aa12.42□□□□□ -0.42
CLN8-206ENST00000523237 TRBV12-3P01733 135 aa12.42□□□□□ -0.42
CLN8-206ENST00000523237 PRH1P02810 166 aa12.42□□□□□ -0.42
CLN8-206ENST00000523237 RPL27AP46776 148 aaKnown RBP12.42□□□□□ -0.42
CLN8-206ENST00000523237 SYNJ2BPP57105 145 aa12.42□□□□□ -0.42
CLN8-206ENST00000523237 TAS2R20P59543 309 aa12.42□□□□□ -0.42
CLN8-206ENST00000523237 HERV-K104P61576 105 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms