RNA–Protein interactions for RNA: ENST00000522963.5

PVT1-215, Transcript of Pvt1 oncogene, humanhuman

TSL 4

Gene PVT1, Length 568 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-215ENST00000522963 TMEM219Q86XT9 240 aa9.52□□□□□ -0.89
PVT1-215ENST00000522963 OR52B4Q8NGK2 314 aa9.52□□□□□ -0.89
PVT1-215ENST00000522963 CD300LFQ8TDQ1 290 aa9.52□□□□□ -0.89
PVT1-215ENST00000522963 GLYATL2Q8WU03 294 aa9.52□□□□□ -0.89
PVT1-215ENST00000522963 CHPT1Q8WUD6 406 aa9.52□□□□□ -0.89
PVT1-215ENST00000522963 FLYWCH2Q96CP2 140 aaKnown RBP9.52□□□□□ -0.89
PVT1-215ENST00000522963 SEC22CQ9BRL7 303 aa9.52□□□□□ -0.89
PVT1-215ENST00000522963 TMEM222Q9H0R3 208 aa9.52□□□□□ -0.89
PVT1-215ENST00000522963 FAM212BQ9NTI7 297 aaPredicted RBP9.52□□□□□ -0.89
PVT1-215ENST00000522963 TCF19Q9Y242 345 aa9.52□□□□□ -0.89
PVT1-215ENST00000522963 KCNIP3Q9Y2W7 256 aa9.52□□□□□ -0.89
PVT1-215ENST00000522963 HAX1O00165 279 aa9.51□□□□□ -0.89
PVT1-215ENST00000522963 SHOXO15266 292 aa9.51□□□□□ -0.89
PVT1-215ENST00000522963 B3GALNT1O75752 331 aa9.51□□□□□ -0.89
PVT1-215ENST00000522963 HPRT1P00492 218 aa9.51□□□□□ -0.89
PVT1-215ENST00000522963 HLA-AP01891 365 aaKnown RBP9.51□□□□□ -0.89
PVT1-215ENST00000522963 IL5P05113 134 aa9.51□□□□□ -0.89
PVT1-215ENST00000522963 MDKP21741 143 aaPredicted RBP9.51□□□□□ -0.89
PVT1-215ENST00000522963 F2RL1P55085 397 aa9.51□□□□□ -0.89
PVT1-215ENST00000522963 RAG2P55895 527 aa9.51□□□□□ -0.89
PVT1-215ENST00000522963 DHRS2Q13268 280 aa9.51□□□□□ -0.89
PVT1-215ENST00000522963 TRIM16LQ309B1 348 aa9.51□□□□□ -0.89
PVT1-215ENST00000522963 C4orf46Q504U0 113 aa9.51□□□□□ -0.89
PVT1-215ENST00000522963 C11orf88Q6PI97 169 aa9.51□□□□□ -0.89
PVT1-215ENST00000522963 LYG2Q86SG7 212 aa9.51□□□□□ -0.89
PVT1-215ENST00000522963 OR4C13Q8NGP0 309 aa9.51□□□□□ -0.89
PVT1-215ENST00000522963 LHFPL5Q8TAF8 219 aa9.51□□□□□ -0.89
PVT1-215ENST00000522963 CASTOR1Q8WTX7 329 aa9.51□□□□□ -0.89
PVT1-215ENST00000522963 HARBI1Q96MB7 349 aa9.51□□□□□ -0.89
PVT1-215ENST00000522963 PLEKHA2Q9HB19 425 aa9.51□□□□□ -0.89
PVT1-215ENST00000522963 C1RLQ9NZP8 487 aa9.51□□□□□ -0.89
PVT1-215ENST00000522963 CDS2O95674 445 aa9.5□□□□□ -0.89
PVT1-215ENST00000522963 IGLV2-23P01705 113 aa9.5□□□□□ -0.89
PVT1-215ENST00000522963 SERPINE2P07093 398 aa9.5□□□□□ -0.89
PVT1-215ENST00000522963 ANXA3P12429 323 aa9.5□□□□□ -0.89
PVT1-215ENST00000522963 ANKRD55Q3KP44 614 aa9.5□□□□□ -0.89
PVT1-215ENST00000522963 LIAT1Q6ZQX7 453 aa9.5□□□□□ -0.89
PVT1-215ENST00000522963 VKORC1L1Q8N0U8 176 aa9.5□□□□□ -0.89
PVT1-215ENST00000522963 MINDY2Q8NBR6 621 aa9.5□□□□□ -0.89
PVT1-215ENST00000522963 OR4F5Q8NH21 305 aa9.5□□□□□ -0.89
PVT1-215ENST00000522963 OSR1Q8TAX0 266 aaPredicted RBP9.5□□□□□ -0.89
PVT1-215ENST00000522963 RBM14Q96PK6 669 aaKnown RBP9.5□□□□□ -0.89
PVT1-215ENST00000522963 RNF5Q99942 180 aa9.5□□□□□ -0.89
PVT1-215ENST00000522963 PLSCR3Q9NRY6 295 aa9.5□□□□□ -0.89
PVT1-215ENST00000522963 COMMD9Q9P000 198 aa9.5□□□□□ -0.89
PVT1-215ENST00000522963 A0A0B4J293 547 aa9.49□□□□□ -0.89
PVT1-215ENST00000522963 CHST1O43916 411 aa9.49□□□□□ -0.89
PVT1-215ENST00000522963 PRAF2O60831 178 aa9.49□□□□□ -0.89
PVT1-215ENST00000522963 OR2F2O95006 317 aa9.49□□□□□ -0.89
PVT1-215ENST00000522963 DHFRP00374 187 aa9.49□□□□□ -0.89
PVT1-215ENST00000522963 RPA2P15927 270 aa9.49□□□□□ -0.89
PVT1-215ENST00000522963 LGALS7P47929 136 aa9.49□□□□□ -0.89
PVT1-215ENST00000522963 RELBQ01201 579 aa9.49□□□□□ -0.89
PVT1-215ENST00000522963 PSG5Q15238 335 aa9.49□□□□□ -0.89
PVT1-215ENST00000522963 MMDQ15546 238 aa9.49□□□□□ -0.89
PVT1-215ENST00000522963 SSX9Q7RTT3 188 aa9.49□□□□□ -0.89
PVT1-215ENST00000522963 SELENOHQ8IZQ5 122 aaKnown RBP9.49□□□□□ -0.89
PVT1-215ENST00000522963 NPBQ8NG41 125 aa9.49□□□□□ -0.89
PVT1-215ENST00000522963 ZNF431Q8TF32 576 aaPredicted RBP9.49□□□□□ -0.89
PVT1-215ENST00000522963 R3HDM4Q96D70 268 aa9.49□□□□□ -0.89
PVT1-215ENST00000522963 TMEM56Q96MV1 263 aa9.49□□□□□ -0.89
PVT1-215ENST00000522963 TSNAXQ99598 290 aaKnown RBP9.49□□□□□ -0.89
PVT1-215ENST00000522963 SLC25A33Q9BSK2 321 aa9.49□□□□□ -0.89
PVT1-215ENST00000522963 PITPNC1Q9UKF7 332 aa9.49□□□□□ -0.89
PVT1-215ENST00000522963 TMEM56-RWDD3S4R434 201 aa9.49□□□□□ -0.89
PVT1-215ENST00000522963 DNHD1Q96M86 4753 aa9.49□□□□□ -0.89
PVT1-215ENST00000522963 NCBP2LA6PVI3 153 aaKnown RBP9.48□□□□□ -0.89
PVT1-215ENST00000522963 RRHO14718 337 aa9.48□□□□□ -0.89
PVT1-215ENST00000522963 NBR2O15453 112 aa9.48□□□□□ -0.89
PVT1-215ENST00000522963 SLC25A17O43808 307 aa9.48□□□□□ -0.89
PVT1-215ENST00000522963 NDUFA3O95167 84 aa9.48□□□□□ -0.89
PVT1-215ENST00000522963 SPDEFO95238 335 aa9.48□□□□□ -0.89
PVT1-215ENST00000522963 DUS4LO95620 317 aaKnown RBP9.48□□□□□ -0.89
PVT1-215ENST00000522963 HRASP01112 189 aa9.48□□□□□ -0.89
PVT1-215ENST00000522963 KRASP01116 189 aa9.48□□□□□ -0.89
PVT1-215ENST00000522963 IGKV1-5P01602 117 aa9.48□□□□□ -0.89
PVT1-215ENST00000522963 CRYGBP07316 175 aa9.48□□□□□ -0.89
PVT1-215ENST00000522963 SAA1P0DJI8 122 aaPredicted RBP9.48□□□□□ -0.89
PVT1-215ENST00000522963 NQO2P16083 231 aa9.48□□□□□ -0.89
PVT1-215ENST00000522963 G6PCP35575 357 aa9.48□□□□□ -0.89
PVT1-215ENST00000522963 COMPP49747 757 aaPredicted RBP9.48□□□□□ -0.89
PVT1-215ENST00000522963 UBE2KP61086 200 aa9.48□□□□□ -0.89
PVT1-215ENST00000522963 POU2AF1Q16633 256 aa9.48□□□□□ -0.89
PVT1-215ENST00000522963 TATDN3Q17R31 274 aa9.48□□□□□ -0.89
PVT1-215ENST00000522963 TMEM268Q5VZI3 342 aa9.48□□□□□ -0.89
PVT1-215ENST00000522963 LIN54Q6MZP7 749 aa9.48□□□□□ -0.89
PVT1-215ENST00000522963 Q6ZSV7 163 aa9.48□□□□□ -0.89
PVT1-215ENST00000522963 ZNF695Q8IW36 515 aa9.48□□□□□ -0.89
PVT1-215ENST00000522963 LGI3Q8N145 548 aa9.48□□□□□ -0.89
PVT1-215ENST00000522963 LRTM2Q8N967 370 aa9.48□□□□□ -0.89
PVT1-215ENST00000522963 Q8N9W7 124 aa9.48□□□□□ -0.89
PVT1-215ENST00000522963 OR8H1Q8NGG4 311 aa9.48□□□□□ -0.89
PVT1-215ENST00000522963 RBPMSQ93062 196 aaKnown RBP9.48□□□□□ -0.89
PVT1-215ENST00000522963 IL22RA2Q969J5 263 aa9.48□□□□□ -0.89
PVT1-215ENST00000522963 SEC22AQ96IW7 307 aa9.48□□□□□ -0.89
PVT1-215ENST00000522963 RHOVQ96L33 236 aa9.48□□□□□ -0.89
PVT1-215ENST00000522963 FBXL15Q9H469 300 aa9.48□□□□□ -0.89
PVT1-215ENST00000522963 TPSG1Q9NRR2 321 aa9.48□□□□□ -0.89
PVT1-215ENST00000522963 MOB4Q9Y3A3 225 aa9.48□□□□□ -0.89
PVT1-215ENST00000522963 A0A0G2JRQ6 117 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms