RNA–Protein interactions for RNA: ENST00000522658.5

PABPC1-220, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 736 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-220ENST00000522658 C6orf62Q9GZU0 229 aaPredicted RBP4.7□□□□□ -1.66
PABPC1-220ENST00000522658 WFDC10AQ9H1F0 79 aa4.7□□□□□ -1.66
PABPC1-220ENST00000522658 OR2D2Q9H210 308 aa4.7□□□□□ -1.66
PABPC1-220ENST00000522658 C12orf4Q9NQ89 552 aa4.7□□□□□ -1.66
PABPC1-220ENST00000522658 BABAM2Q9NXR7 383 aa4.7□□□□□ -1.66
PABPC1-220ENST00000522658 AASSQ9UDR5 926 aa4.7□□□□□ -1.66
PABPC1-220ENST00000522658 STARD9Q9P2P6 4700 aa4.7□□□□□ -1.66
PABPC1-220ENST00000522658 DNAH1Q9P2D7 4330 aa4.69□□□□□ -1.66
PABPC1-220ENST00000522658 TRAV8-7A0A075B6U6 113 aa4.69□□□□□ -1.66
PABPC1-220ENST00000522658 A0A0J9YWU9 116 aa4.69□□□□□ -1.66
PABPC1-220ENST00000522658 TRBV5-5A0A0J9YX44 114 aa4.69□□□□□ -1.66
PABPC1-220ENST00000522658 LOC100130705A0A1B0GUX0 176 aa4.69□□□□□ -1.66
PABPC1-220ENST00000522658 ZNF320A2RRD8 509 aa4.69□□□□□ -1.66
PABPC1-220ENST00000522658 IZUMO1RA6ND01 250 aa4.69□□□□□ -1.66
PABPC1-220ENST00000522658 BET1O15155 118 aa4.69□□□□□ -1.66
PABPC1-220ENST00000522658 GGCTO75223 188 aaKnown RBP4.69□□□□□ -1.66
PABPC1-220ENST00000522658 TRBV12-3P01733 135 aa4.69□□□□□ -1.66
PABPC1-220ENST00000522658 FOLR2P14207 255 aa4.69□□□□□ -1.66
PABPC1-220ENST00000522658 IGFBP3P17936 291 aaPredicted RBP4.69□□□□□ -1.66
PABPC1-220ENST00000522658 SERPINB10P48595 397 aa4.69□□□□□ -1.66
PABPC1-220ENST00000522658 ETV1P50549 477 aa4.69□□□□□ -1.66
PABPC1-220ENST00000522658 XAF1Q6GPH4 301 aa4.69□□□□□ -1.66
PABPC1-220ENST00000522658 CEMP1Q6PRD7 247 aaPredicted RBP4.69□□□□□ -1.66
PABPC1-220ENST00000522658 CBR4Q8N4T8 237 aa4.69□□□□□ -1.66
PABPC1-220ENST00000522658 ADAD2Q8NCV1 583 aaKnown RBP4.69□□□□□ -1.66
PABPC1-220ENST00000522658 OR1L6Q8NGR2 347 aa4.69□□□□□ -1.66
PABPC1-220ENST00000522658 SRSF12Q8WXF0 261 aaKnown RBP4.69□□□□□ -1.66
PABPC1-220ENST00000522658 ADTRPQ96IZ2 230 aa4.69□□□□□ -1.66
PABPC1-220ENST00000522658 CMSS1Q9BQ75 279 aaKnown RBP4.69□□□□□ -1.66
PABPC1-220ENST00000522658 FAAP24Q9BTP7 215 aa4.69□□□□□ -1.66
PABPC1-220ENST00000522658 C11orf54Q9H0W9 315 aaPredicted RBP4.69□□□□□ -1.66
PABPC1-220ENST00000522658 PLGRKTQ9HBL7 147 aa4.69□□□□□ -1.66
PABPC1-220ENST00000522658 OR1A1Q9P1Q5 309 aa4.69□□□□□ -1.66
PABPC1-220ENST00000522658 MSGN1A6NI15 193 aa4.68□□□□□ -1.66
PABPC1-220ENST00000522658 C2orf70A6NJV1 201 aa4.68□□□□□ -1.66
PABPC1-220ENST00000522658 BMPR1BO00238 502 aa4.68□□□□□ -1.66
PABPC1-220ENST00000522658 OGG1O15527 345 aa4.68□□□□□ -1.66
PABPC1-220ENST00000522658 CYB5BO43169 146 aa4.68□□□□□ -1.66
PABPC1-220ENST00000522658 SPRY2O43597 315 aa4.68□□□□□ -1.66
PABPC1-220ENST00000522658 RBMXL2O75526 392 aaKnown RBP4.68□□□□□ -1.66
PABPC1-220ENST00000522658 CRYZL1O95825 349 aa4.68□□□□□ -1.66
PABPC1-220ENST00000522658 IGLV2-14P01704 120 aa4.68□□□□□ -1.66
PABPC1-220ENST00000522658 IFNA4P05014 189 aa4.68□□□□□ -1.66
PABPC1-220ENST00000522658 CD3GP09693 182 aa4.68□□□□□ -1.66
PABPC1-220ENST00000522658 LIMS3P0CW19 117 aa4.68□□□□□ -1.66
PABPC1-220ENST00000522658 LIMS4P0CW20 117 aa4.68□□□□□ -1.66
PABPC1-220ENST00000522658 DEFA4P12838 97 aa4.68□□□□□ -1.66
PABPC1-220ENST00000522658 CELP19835 753 aa4.68□□□□□ -1.66
PABPC1-220ENST00000522658 ARL3P36405 182 aa4.68□□□□□ -1.66
PABPC1-220ENST00000522658 RPS27AP62979 156 aaKnown RBP4.68□□□□□ -1.66
PABPC1-220ENST00000522658 DEFB135Q30KP9 77 aa4.68□□□□□ -1.66
PABPC1-220ENST00000522658 C15orf32Q32M92 178 aa4.68□□□□□ -1.66
PABPC1-220ENST00000522658 LYG2Q86SG7 212 aa4.68□□□□□ -1.66
PABPC1-220ENST00000522658 ZNF383Q8NA42 475 aa4.68□□□□□ -1.66
PABPC1-220ENST00000522658 NECAP1Q8NC96 275 aa4.68□□□□□ -1.66
PABPC1-220ENST00000522658 SETD9Q8NE22 299 aa4.68□□□□□ -1.66
PABPC1-220ENST00000522658 OR10J5Q8NHC4 309 aa4.68□□□□□ -1.66
PABPC1-220ENST00000522658 RHOXF1Q8NHV9 184 aa4.68□□□□□ -1.66
PABPC1-220ENST00000522658 EEF1AKMT3Q96AZ1 226 aa4.68□□□□□ -1.66
PABPC1-220ENST00000522658 TMEM80Q96HE8 168 aa4.68□□□□□ -1.66
PABPC1-220ENST00000522658 DERL3Q96Q80 235 aa4.68□□□□□ -1.66
PABPC1-220ENST00000522658 THAP7Q9BT49 309 aaPredicted RBP4.68□□□□□ -1.66
PABPC1-220ENST00000522658 MFFQ9GZY8 342 aa4.68□□□□□ -1.66
PABPC1-220ENST00000522658 FGF20Q9NP95 211 aaPredicted RBP4.68□□□□□ -1.66
PABPC1-220ENST00000522658 RDH8Q9NYR8 311 aa4.68□□□□□ -1.66
PABPC1-220ENST00000522658 DIMT1Q9UNQ2 313 aaKnown RBP4.68□□□□□ -1.66
PABPC1-220ENST00000522658 MRPS7Q9Y2R9 242 aaKnown RBP4.68□□□□□ -1.66
PABPC1-220ENST00000522658 PRELID3BQ9Y3B1 194 aa4.68□□□□□ -1.66
PABPC1-220ENST00000522658 CSMD3Q7Z407 3707 aa4.68□□□□□ -1.66
PABPC1-220ENST00000522658 TRBV5-7A0A0A0MS05 114 aa4.67□□□□□ -1.66
PABPC1-220ENST00000522658 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP4.67□□□□□ -1.66
PABPC1-220ENST00000522658 PPP5D1E7EU14 171 aa4.67□□□□□ -1.66
PABPC1-220ENST00000522658 UBE2CO00762 179 aa4.67□□□□□ -1.66
PABPC1-220ENST00000522658 DEDDO75618 318 aa4.67□□□□□ -1.66
PABPC1-220ENST00000522658 OR2J3O76001 311 aa4.67□□□□□ -1.66
PABPC1-220ENST00000522658 MYOD1P15172 320 aa4.67□□□□□ -1.66
PABPC1-220ENST00000522658 CD36P16671 472 aa4.67□□□□□ -1.66
PABPC1-220ENST00000522658 GABRB1P18505 474 aa4.67□□□□□ -1.66
PABPC1-220ENST00000522658 SRMP19623 302 aa4.67□□□□□ -1.66
PABPC1-220ENST00000522658 HTR2CP28335 458 aa4.67□□□□□ -1.66
PABPC1-220ENST00000522658 KIR2DS2P43631 304 aa4.67□□□□□ -1.66
PABPC1-220ENST00000522658 UBE2KP61086 200 aa4.67□□□□□ -1.66
PABPC1-220ENST00000522658 TNFRSF9Q07011 255 aa4.67□□□□□ -1.66
PABPC1-220ENST00000522658 PJVKQ0ZLH3 352 aa4.67□□□□□ -1.66
PABPC1-220ENST00000522658 DEFB114Q30KQ6 69 aa4.67□□□□□ -1.66
PABPC1-220ENST00000522658 SIGIRRQ6IA17 410 aa4.67□□□□□ -1.66
PABPC1-220ENST00000522658 LAMTOR1Q6IAA8 161 aa4.67□□□□□ -1.66
PABPC1-220ENST00000522658 OR10K2Q6IF99 312 aa4.67□□□□□ -1.66
PABPC1-220ENST00000522658 BTNL8Q6UX41 500 aa4.67□□□□□ -1.66
PABPC1-220ENST00000522658 IL34Q6ZMJ4 242 aa4.67□□□□□ -1.66
PABPC1-220ENST00000522658 IDO2Q6ZQW0 420 aa4.67□□□□□ -1.66
PABPC1-220ENST00000522658 C5orf24Q7Z6I8 188 aa4.67□□□□□ -1.66
PABPC1-220ENST00000522658 MMD2Q8IY49 270 aa4.67□□□□□ -1.66
PABPC1-220ENST00000522658 TEX45Q8NA69 505 aa4.67□□□□□ -1.66
PABPC1-220ENST00000522658 OR6M1Q8NGM8 313 aa4.67□□□□□ -1.66
PABPC1-220ENST00000522658 VSTM2AQ8TAG5 236 aa4.67□□□□□ -1.66
PABPC1-220ENST00000522658 CYGBQ8WWM9 190 aa4.67□□□□□ -1.66
PABPC1-220ENST00000522658 CENPOQ9BU64 300 aa4.67□□□□□ -1.66
PABPC1-220ENST00000522658 PARP12Q9H0J9 701 aaKnown RBP4.67□□□□□ -1.66
PABPC1-220ENST00000522658 ZC4H2Q9NQZ6 224 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms