RNA–Protein interactions for RNA: ENST00000520399.1

ERGIC1-208, Transcript of endoplasmic reticulum-golgi intermediate compartment 1, humanhuman

TSL 1 (best)

Gene ERGIC1, Length 5,687 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC1-208ENST00000520399 HIST1H2BMQ99879 126 aa10.45□□□□□ -0.74
ERGIC1-208ENST00000520399 HDHD3Q9BSH5 251 aaPredicted RBP10.45□□□□□ -0.74
ERGIC1-208ENST00000520399 TRAV21A0A0B4J279 112 aa10.45□□□□□ -0.74
ERGIC1-208ENST00000520399 CHST1O43916 411 aa10.45□□□□□ -0.74
ERGIC1-208ENST00000520399 TSPAN2O60636 221 aa10.45□□□□□ -0.74
ERGIC1-208ENST00000520399 PRSS53Q2L4Q9 553 aa10.45□□□□□ -0.74
ERGIC1-208ENST00000520399 KIR2DL4Q99706 377 aa10.45□□□□□ -0.74
ERGIC1-208ENST00000520399 ZNF257Q9Y2Q1 563 aa10.45□□□□□ -0.74
ERGIC1-208ENST00000520399 A8MWP6 167 aa10.45□□□□□ -0.74
ERGIC1-208ENST00000520399 DXOO77932 396 aaKnown RBP10.45□□□□□ -0.74
ERGIC1-208ENST00000520399 OR2K2Q8NGT1 345 aa10.45□□□□□ -0.74
ERGIC1-208ENST00000520399 CST9LQ9H4G1 147 aa10.45□□□□□ -0.74
ERGIC1-208ENST00000520399 KLK13Q9UKR3 277 aa10.45□□□□□ -0.74
ERGIC1-208ENST00000520399 EREGO14944 169 aa10.44□□□□□ -0.74
ERGIC1-208ENST00000520399 VSIG10L2P0DP72 767 aa10.44□□□□□ -0.74
ERGIC1-208ENST00000520399 ZNF385AQ96PM9 386 aaKnown RBP10.44□□□□□ -0.74
ERGIC1-208ENST00000520399 NUMA1Q14980 2115 aa10.44□□□□□ -0.74
ERGIC1-208ENST00000520399 TRBV7-9A0A0J9YWB2 115 aa10.44□□□□□ -0.74
ERGIC1-208ENST00000520399 A0A1W2PQM1 296 aa10.44□□□□□ -0.74
ERGIC1-208ENST00000520399 LEPROTL1O95214 131 aa10.44□□□□□ -0.74
ERGIC1-208ENST00000520399 ZNF688P0C7X2 276 aa10.44□□□□□ -0.74
ERGIC1-208ENST00000520399 KLK2P20151 261 aa10.44□□□□□ -0.74
ERGIC1-208ENST00000520399 GAGE2BQ13066 116 aa10.44□□□□□ -0.74
ERGIC1-208ENST00000520399 GAGE2EQ4V326 116 aa10.44□□□□□ -0.74
ERGIC1-208ENST00000520399 OR8G5Q8NG78 346 aa10.44□□□□□ -0.74
ERGIC1-208ENST00000520399 GAGE2DQ9UEU5 116 aa10.44□□□□□ -0.74
ERGIC1-208ENST00000520399 PARP14Q460N5 1801 aa10.44□□□□□ -0.74
ERGIC1-208ENST00000520399 SPAARA0A1B0GVQ0 90 aa10.44□□□□□ -0.74
ERGIC1-208ENST00000520399 UMODP07911 640 aa10.44□□□□□ -0.74
ERGIC1-208ENST00000520399 PF4V1P10720 104 aa10.44□□□□□ -0.74
ERGIC1-208ENST00000520399 EFNB2P52799 333 aa10.44□□□□□ -0.74
ERGIC1-208ENST00000520399 COL10A1Q03692 680 aa10.44□□□□□ -0.74
ERGIC1-208ENST00000520399 LHFPL4Q7Z7J7 247 aa10.44□□□□□ -0.74
ERGIC1-208ENST00000520399 HOGA1Q86XE5 327 aa10.44□□□□□ -0.74
ERGIC1-208ENST00000520399 FBLIM1Q8WUP2 373 aa10.44□□□□□ -0.74
ERGIC1-208ENST00000520399 EAF1Q96JC9 268 aaPredicted RBP10.44□□□□□ -0.74
ERGIC1-208ENST00000520399 SDHCQ99643 169 aaPredicted RBP10.44□□□□□ -0.74
ERGIC1-208ENST00000520399 SF3B6Q9Y3B4 125 aaKnown RBP10.44□□□□□ -0.74
ERGIC1-208ENST00000520399 CTXND1A0A1B0GTU2 59 aa10.44□□□□□ -0.74
ERGIC1-208ENST00000520399 C7orf71A4D174 169 aa10.44□□□□□ -0.74
ERGIC1-208ENST00000520399 AMY1AP04745 511 aa10.44□□□□□ -0.74
ERGIC1-208ENST00000520399 MRPL24Q96A35 216 aaKnown RBP10.44□□□□□ -0.74
ERGIC1-208ENST00000520399 RNF122Q9H9V4 155 aa10.44□□□□□ -0.74
ERGIC1-208ENST00000520399 GDF9O60383 454 aa10.44□□□□□ -0.74
ERGIC1-208ENST00000520399 NPSP0C0P6 89 aa10.44□□□□□ -0.74
ERGIC1-208ENST00000520399 FUT5Q11128 374 aa10.44□□□□□ -0.74
ERGIC1-208ENST00000520399 KIR3DL3Q8N743 410 aa10.44□□□□□ -0.74
ERGIC1-208ENST00000520399 MS4A5Q9H3V2 200 aa10.44□□□□□ -0.74
ERGIC1-208ENST00000520399 F11RQ9Y624 299 aaKnown RBP10.44□□□□□ -0.74
ERGIC1-208ENST00000520399 SYNGR1O43759 233 aa10.43□□□□□ -0.74
ERGIC1-208ENST00000520399 ADRA2AP08913 450 aa10.43□□□□□ -0.74
ERGIC1-208ENST00000520399 NANOS3P60323 173 aaKnown RBP10.43□□□□□ -0.74
ERGIC1-208ENST00000520399 RFLNBQ8N5W9 214 aa10.43□□□□□ -0.74
ERGIC1-208ENST00000520399 SOSTQ9BQB4 213 aa10.43□□□□□ -0.74
ERGIC1-208ENST00000520399 SH3BGRL3Q9H299 93 aa10.43□□□□□ -0.74
ERGIC1-208ENST00000520399 TMEM106BQ9NUM4 274 aa10.43□□□□□ -0.74
ERGIC1-208ENST00000520399 IFI6P09912 130 aa10.43□□□□□ -0.74
ERGIC1-208ENST00000520399 APELAP0DMC3 54 aa10.43□□□□□ -0.74
ERGIC1-208ENST00000520399 FSTP19883 344 aa10.43□□□□□ -0.74
ERGIC1-208ENST00000520399 SSC4DQ8WTU2 575 aa10.43□□□□□ -0.74
ERGIC1-208ENST00000520399 MRPS18BQ9Y676 258 aaKnown RBP10.43□□□□□ -0.74
ERGIC1-208ENST00000520399 IGHV3OR15-7A0A075B7D8 119 aa10.43□□□□□ -0.74
ERGIC1-208ENST00000520399 IGHV3-21A0A0B4J1V1 117 aa10.43□□□□□ -0.74
ERGIC1-208ENST00000520399 H3BUT2 72 aa10.43□□□□□ -0.74
ERGIC1-208ENST00000520399 ATP6V0CP27449 155 aa10.43□□□□□ -0.74
ERGIC1-208ENST00000520399 GPR6P46095 362 aaPredicted RBP10.43□□□□□ -0.74
ERGIC1-208ENST00000520399 SEC11AP67812 179 aa10.43□□□□□ -0.74
ERGIC1-208ENST00000520399 PSMG4Q5JS54 123 aa10.43□□□□□ -0.74
ERGIC1-208ENST00000520399 SSBP4Q9BWG4 385 aaPredicted RBP10.43□□□□□ -0.74
ERGIC1-208ENST00000520399 RTN4RQ9BZR6 473 aa10.43□□□□□ -0.74
ERGIC1-208ENST00000520399 PITX3O75364 302 aa10.43□□□□□ -0.74
ERGIC1-208ENST00000520399 CNTFRP26992 372 aa10.43□□□□□ -0.74
ERGIC1-208ENST00000520399 EWSR1Q01844 656 aaKnown RBP eCLIP10.43□□□□□ -0.74
ERGIC1-208ENST00000520399 PRDM13Q9H4Q3 707 aa10.43□□□□□ -0.74
ERGIC1-208ENST00000520399 CA11O75493 328 aa10.42□□□□□ -0.74
ERGIC1-208ENST00000520399 ZNF418Q8TF45 676 aaPredicted RBP10.42□□□□□ -0.74
ERGIC1-208ENST00000520399 TXNDC17Q9BRA2 123 aa10.42□□□□□ -0.74
ERGIC1-208ENST00000520399 MRPL16Q9NX20 251 aaKnown RBP10.42□□□□□ -0.74
ERGIC1-208ENST00000520399 CISD1Q9NZ45 108 aaKnown RBP10.42□□□□□ -0.74
ERGIC1-208ENST00000520399 A0A0U1RQV5 110 aa10.42□□□□□ -0.74
ERGIC1-208ENST00000520399 HEPN1Q6WQI6 88 aa10.42□□□□□ -0.74
ERGIC1-208ENST00000520399 KLF2Q9Y5W3 355 aaPredicted RBP10.42□□□□□ -0.74
ERGIC1-208ENST00000520399 PSMB11A5LHX3 300 aa10.42□□□□□ -0.74
ERGIC1-208ENST00000520399 H7C1H1 209 aa10.42□□□□□ -0.74
ERGIC1-208ENST00000520399 UPK3AO75631 287 aa10.42□□□□□ -0.74
ERGIC1-208ENST00000520399 MFAP2P55001 183 aa10.42□□□□□ -0.74
ERGIC1-208ENST00000520399 TMEM50BP56557 158 aa10.42□□□□□ -0.74
ERGIC1-208ENST00000520399 HIST1H1AQ02539 215 aaPredicted RBP10.42□□□□□ -0.74
ERGIC1-208ENST00000520399 RTN4RL2Q86UN3 420 aa10.42□□□□□ -0.74
ERGIC1-208ENST00000520399 RBKSQ9H477 322 aa10.42□□□□□ -0.74
ERGIC1-208ENST00000520399 SIRT4Q9Y6E7 314 aaPredicted RBP10.42□□□□□ -0.74
ERGIC1-208ENST00000520399 A0A1W2PPC1 479 aa10.42□□□□□ -0.74
ERGIC1-208ENST00000520399 J3QR06 171 aa10.42□□□□□ -0.74
ERGIC1-208ENST00000520399 CD8AP01732 235 aa10.42□□□□□ -0.74
ERGIC1-208ENST00000520399 FAM27BQ5VT28 67 aa10.42□□□□□ -0.74
ERGIC1-208ENST00000520399 C1orf174Q8IYL3 243 aa10.42□□□□□ -0.74
ERGIC1-208ENST00000520399 REG4Q9BYZ8 158 aa10.42□□□□□ -0.74
ERGIC1-208ENST00000520399 NKX2-6A6NCS4 301 aa10.42□□□□□ -0.74
ERGIC1-208ENST00000520399 GPX1P07203 203 aa10.42□□□□□ -0.74
ERGIC1-208ENST00000520399 DANCRP0C864 163 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms