RNA–Protein interactions for RNA: ENST00000520286.5

LSM1-202, Transcript of LSM1 homolog, mRNA degradation associated, humanhuman

TSL 1 (best)

Gene LSM1, Length 776 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1-202ENST00000520286 ZNF596Q8TC21 504 aa4.89□□□□□ -1.63
LSM1-202ENST00000520286 ABHD3Q8WU67 409 aa4.89□□□□□ -1.63
LSM1-202ENST00000520286 ASZ1Q8WWH4 475 aa4.89□□□□□ -1.63
LSM1-202ENST00000520286 BAALCQ8WXS3 180 aa4.89□□□□□ -1.63
LSM1-202ENST00000520286 ING5Q8WYH8 240 aa4.89□□□□□ -1.63
LSM1-202ENST00000520286 RGP1Q92546 391 aaPredicted RBP4.89□□□□□ -1.63
LSM1-202ENST00000520286 BMFQ96LC9 184 aa4.89□□□□□ -1.63
LSM1-202ENST00000520286 ZNF681Q96N22 645 aa4.89□□□□□ -1.63
LSM1-202ENST00000520286 AGMATQ9BSE5 352 aa4.89□□□□□ -1.63
LSM1-202ENST00000520286 RSPO3Q9BXY4 272 aaPredicted RBP4.89□□□□□ -1.63
LSM1-202ENST00000520286 CHST5Q9GZS9 411 aa4.89□□□□□ -1.63
LSM1-202ENST00000520286 TOLLIPQ9H0E2 274 aa4.89□□□□□ -1.63
LSM1-202ENST00000520286 IFI27L2Q9H2X8 130 aa4.89□□□□□ -1.63
LSM1-202ENST00000520286 RERGLQ9H628 205 aa4.89□□□□□ -1.63
LSM1-202ENST00000520286 KIR3DX1Q9H7L2 352 aa4.89□□□□□ -1.63
LSM1-202ENST00000520286 TMEM27Q9HBJ8 222 aa4.89□□□□□ -1.63
LSM1-202ENST00000520286 UQCC1Q9NVA1 299 aa4.89□□□□□ -1.63
LSM1-202ENST00000520286 UNC79Q9P2D8 2635 aa4.89□□□□□ -1.63
LSM1-202ENST00000520286 SPAARA0A1B0GVQ0 90 aa4.88□□□□□ -1.63
LSM1-202ENST00000520286 KANTRA0A1W2PQU2 76 aa4.88□□□□□ -1.63
LSM1-202ENST00000520286 MYBPHLA2RUH7 354 aa4.88□□□□□ -1.63
LSM1-202ENST00000520286 ARL5CA6NH57 179 aa4.88□□□□□ -1.63
LSM1-202ENST00000520286 A6NIN4 97 aa4.88□□□□□ -1.63
LSM1-202ENST00000520286 STK16O75716 305 aa4.88□□□□□ -1.63
LSM1-202ENST00000520286 CD74P04233 296 aa4.88□□□□□ -1.63
LSM1-202ENST00000520286 BCHEP06276 602 aa4.88□□□□□ -1.63
LSM1-202ENST00000520286 C1GALT1C1LP0DN25 315 aa4.88□□□□□ -1.63
LSM1-202ENST00000520286 CD37P11049 281 aa4.88□□□□□ -1.63
LSM1-202ENST00000520286 HLA-GP17693 338 aa4.88□□□□□ -1.63
LSM1-202ENST00000520286 NFYBP25208 207 aa4.88□□□□□ -1.63
LSM1-202ENST00000520286 DDTP30046 118 aa4.88□□□□□ -1.63
LSM1-202ENST00000520286 PFN2P35080 140 aa4.88□□□□□ -1.63
LSM1-202ENST00000520286 TAS2R43P59537 309 aa4.88□□□□□ -1.63
LSM1-202ENST00000520286 ARG2P78540 354 aa4.88□□□□□ -1.63
LSM1-202ENST00000520286 KIR2DS1Q14954 304 aa4.88□□□□□ -1.63
LSM1-202ENST00000520286 ZNF791Q3KP31 576 aaPredicted RBP4.88□□□□□ -1.63
LSM1-202ENST00000520286 CPTPQ5TA50 214 aa4.88□□□□□ -1.63
LSM1-202ENST00000520286 GLT8D1Q68CQ7 371 aa4.88□□□□□ -1.63
LSM1-202ENST00000520286 LPCAT3Q6P1A2 487 aa4.88□□□□□ -1.63
LSM1-202ENST00000520286 CEMP1Q6PRD7 247 aaPredicted RBP4.88□□□□□ -1.63
LSM1-202ENST00000520286 ZNF433Q8N7K0 673 aaPredicted RBP4.88□□□□□ -1.63
LSM1-202ENST00000520286 COX18Q8N8Q8 333 aa4.88□□□□□ -1.63
LSM1-202ENST00000520286 SLC30A7Q8NEW0 376 aa4.88□□□□□ -1.63
LSM1-202ENST00000520286 OR5J2Q8NH18 312 aa4.88□□□□□ -1.63
LSM1-202ENST00000520286 ZNF461Q8TAF7 563 aa4.88□□□□□ -1.63
LSM1-202ENST00000520286 LCN9Q8WX39 176 aa4.88□□□□□ -1.63
LSM1-202ENST00000520286 FAM131CQ96AQ9 280 aa4.88□□□□□ -1.63
LSM1-202ENST00000520286 SMARCD1Q96GM5 515 aa4.88□□□□□ -1.63
LSM1-202ENST00000520286 PGLYRP3Q96LB9 341 aa4.88□□□□□ -1.63
LSM1-202ENST00000520286 YPEL4Q96NS1 127 aa4.88□□□□□ -1.63
LSM1-202ENST00000520286 ZNF426Q9BUY5 554 aa4.88□□□□□ -1.63
LSM1-202ENST00000520286 METTL9Q9H1A3 318 aa4.88□□□□□ -1.63
LSM1-202ENST00000520286 ZDHHC4Q9NPG8 344 aa4.88□□□□□ -1.63
LSM1-202ENST00000520286 C19orf12Q9NSK7 152 aa4.88□□□□□ -1.63
LSM1-202ENST00000520286 ASF1BQ9NVP2 202 aa4.88□□□□□ -1.63
LSM1-202ENST00000520286 SLC35A3Q9Y2D2 325 aa4.88□□□□□ -1.63
LSM1-202ENST00000520286 NUP214P35658 2090 aaPredicted RBP4.88□□□□□ -1.63
LSM1-202ENST00000520286 IGF2RP11717 2491 aa4.88□□□□□ -1.63
LSM1-202ENST00000520286 NUP210LQ5VU65 1888 aa4.88□□□□□ -1.63
LSM1-202ENST00000520286 HELZ2Q9BYK8 2649 aaKnown RBP4.87□□□□□ -1.63
LSM1-202ENST00000520286 A8MU10 97 aa4.87□□□□□ -1.63
LSM1-202ENST00000520286 ZNF879B4DU55 563 aa4.87□□□□□ -1.63
LSM1-202ENST00000520286 E7EQ34 232 aa4.87□□□□□ -1.63
LSM1-202ENST00000520286 MFNGO00587 321 aa4.87□□□□□ -1.63
LSM1-202ENST00000520286 CD5P06127 495 aa4.87□□□□□ -1.63
LSM1-202ENST00000520286 IL3P08700 152 aa4.87□□□□□ -1.63
LSM1-202ENST00000520286 UCHL1P09936 223 aa4.87□□□□□ -1.63
LSM1-202ENST00000520286 CRABP1P29762 137 aa4.87□□□□□ -1.63
LSM1-202ENST00000520286 CCR2P41597 374 aa4.87□□□□□ -1.63
LSM1-202ENST00000520286 CRATP43155 626 aa4.87□□□□□ -1.63
LSM1-202ENST00000520286 ZNF133P52736 654 aaPredicted RBP4.87□□□□□ -1.63
LSM1-202ENST00000520286 HMGN3Q15651 99 aa4.87□□□□□ -1.63
LSM1-202ENST00000520286 ORMDL2Q53FV1 153 aa4.87□□□□□ -1.63
LSM1-202ENST00000520286 GLT6D1Q7Z4J2 308 aa4.87□□□□□ -1.63
LSM1-202ENST00000520286 GATSQ8NAP1 163 aa4.87□□□□□ -1.63
LSM1-202ENST00000520286 OR4K5Q8NGD3 323 aa4.87□□□□□ -1.63
LSM1-202ENST00000520286 OR10W1Q8NGF6 305 aa4.87□□□□□ -1.63
LSM1-202ENST00000520286 OR4D11Q8NGI4 311 aa4.87□□□□□ -1.63
LSM1-202ENST00000520286 OR6N1Q8NGY5 312 aa4.87□□□□□ -1.63
LSM1-202ENST00000520286 C15orf40Q8WUR7 153 aa4.87□□□□□ -1.63
LSM1-202ENST00000520286 TM4SF18Q96CE8 201 aa4.87□□□□□ -1.63
LSM1-202ENST00000520286 ZNF75AQ96N20 296 aa4.87□□□□□ -1.63
LSM1-202ENST00000520286 ZFP3Q96NJ6 502 aa4.87□□□□□ -1.63
LSM1-202ENST00000520286 GINS4Q9BRT9 223 aa4.87□□□□□ -1.63
LSM1-202ENST00000520286 MED10Q9BTT4 135 aa4.87□□□□□ -1.63
LSM1-202ENST00000520286 EBPLQ9BY08 206 aa4.87□□□□□ -1.63
LSM1-202ENST00000520286 PLA2G12AQ9BZM1 189 aa4.87□□□□□ -1.63
LSM1-202ENST00000520286 TRBV6-7A0A0A0MS04 114 aa4.86□□□□□ -1.63
LSM1-202ENST00000520286 IGHV5-51A0A0C4DH38 117 aa4.86□□□□□ -1.63
LSM1-202ENST00000520286 GGT3PA6NGU5 568 aa4.86□□□□□ -1.63
LSM1-202ENST00000520286 IQCF5A8MTL0 148 aa4.86□□□□□ -1.63
LSM1-202ENST00000520286 J3QKU1 62 aa4.86□□□□□ -1.63
LSM1-202ENST00000520286 TOX3O15405 576 aaPredicted RBP4.86□□□□□ -1.63
LSM1-202ENST00000520286 CD2P06729 351 aa4.86□□□□□ -1.63
LSM1-202ENST00000520286 CRHP06850 196 aa4.86□□□□□ -1.63
LSM1-202ENST00000520286 CD14P08571 375 aa4.86□□□□□ -1.63
LSM1-202ENST00000520286 OR8U9P0C7N5 309 aa4.86□□□□□ -1.63
LSM1-202ENST00000520286 PIRTP0C851 137 aa4.86□□□□□ -1.63
LSM1-202ENST00000520286 PSG2P11465 335 aa4.86□□□□□ -1.63
LSM1-202ENST00000520286 NQO2P16083 231 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 88.6 ms