RNA–Protein interactions for RNA: ENST00000518604.1

SQLE-202, Transcript of squalene epoxidase, humanhuman

TSL 2

Gene SQLE, Length 743 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-202ENST00000518604 TMED7-TICAM2A0A0A6YYA0 188 aa1.46□□□□□ -2.18
SQLE-202ENST00000518604 IGKV2-29A2NJV5 120 aaPredicted RBP1.46□□□□□ -2.18
SQLE-202ENST00000518604 RFPL4AA6NLU0 287 aa1.46□□□□□ -2.18
SQLE-202ENST00000518604 ZNF705FA8MVS1 300 aaPredicted RBP1.46□□□□□ -2.18
SQLE-202ENST00000518604 RFPL4AL1F8VTS6 287 aa1.46□□□□□ -2.18
SQLE-202ENST00000518604 C8orf88P0DMB2 117 aa1.46□□□□□ -2.18
SQLE-202ENST00000518604 PSMB8P28062 276 aa1.46□□□□□ -2.18
SQLE-202ENST00000518604 AKR1C1Q04828 323 aa1.46□□□□□ -2.18
SQLE-202ENST00000518604 COTL1Q14019 142 aa1.46□□□□□ -2.18
SQLE-202ENST00000518604 ZNF791Q3KP31 576 aaPredicted RBP1.46□□□□□ -2.18
SQLE-202ENST00000518604 SLC36A2Q495M3 483 aa1.46□□□□□ -2.18
SQLE-202ENST00000518604 FAM78BQ5VT40 261 aa1.46□□□□□ -2.18
SQLE-202ENST00000518604 TMEM42Q69YG0 159 aa1.46□□□□□ -2.18
SQLE-202ENST00000518604 OR8B12Q8NGG6 310 aa1.46□□□□□ -2.18
SQLE-202ENST00000518604 HAVCR2Q8TDQ0 301 aa1.46□□□□□ -2.18
SQLE-202ENST00000518604 EEF1AKMT1Q8WVE0 214 aa1.46□□□□□ -2.18
SQLE-202ENST00000518604 ASB17Q8WXJ9 295 aa1.46□□□□□ -2.18
SQLE-202ENST00000518604 C8orf4Q9NR00 106 aa1.46□□□□□ -2.18
SQLE-202ENST00000518604 ATP6V1DQ9Y5K8 247 aa1.46□□□□□ -2.18
SQLE-202ENST00000518604 MEIKINA0A087WXM9 373 aa1.45□□□□□ -2.18
SQLE-202ENST00000518604 COCHO43405 550 aa1.45□□□□□ -2.18
SQLE-202ENST00000518604 KLRC4O43908 158 aa1.45□□□□□ -2.18
SQLE-202ENST00000518604 HLA-DRAP01903 254 aa1.45□□□□□ -2.18
SQLE-202ENST00000518604 APOEP02649 317 aa1.45□□□□□ -2.18
SQLE-202ENST00000518604 IL3P08700 152 aa1.45□□□□□ -2.18
SQLE-202ENST00000518604 ARL14EPLP0DKL9 152 aa1.45□□□□□ -2.18
SQLE-202ENST00000518604 ALDH3A1P30838 453 aa1.45□□□□□ -2.18
SQLE-202ENST00000518604 CA5AP35218 305 aa1.45□□□□□ -2.18
SQLE-202ENST00000518604 EMP2P54851 167 aa1.45□□□□□ -2.18
SQLE-202ENST00000518604 CST9Q5W186 159 aa1.45□□□□□ -2.18
SQLE-202ENST00000518604 SBSNQ6UWP8 590 aa1.45□□□□□ -2.18
SQLE-202ENST00000518604 COA5Q86WW8 74 aa1.45□□□□□ -2.18
SQLE-202ENST00000518604 SLC7A6Q92536 515 aa1.45□□□□□ -2.18
SQLE-202ENST00000518604 ARL5BQ96KC2 179 aa1.45□□□□□ -2.18
SQLE-202ENST00000518604 NAA38Q9BRA0 125 aaKnown RBP1.45□□□□□ -2.18
SQLE-202ENST00000518604 ABCC11Q96J66 1382 aa1.45□□□□□ -2.18
SQLE-202ENST00000518604 MYO3BQ8WXR4 1341 aa1.44□□□□□ -2.18
SQLE-202ENST00000518604 DSCAMO60469 2012 aa1.44□□□□□ -2.18
SQLE-202ENST00000518604 A0A0J9YW62 118 aa1.44□□□□□ -2.18
SQLE-202ENST00000518604 DISC1C4P0D8 188 aa1.44□□□□□ -2.18
SQLE-202ENST00000518604 F8W036 122 aa1.44□□□□□ -2.18
SQLE-202ENST00000518604 NIPSNAP2O75323 286 aa1.44□□□□□ -2.18
SQLE-202ENST00000518604 NAPSAO96009 420 aa1.44□□□□□ -2.18
SQLE-202ENST00000518604 C1QCP02747 245 aa1.44□□□□□ -2.18
SQLE-202ENST00000518604 OCM2P0CE71 109 aa1.44□□□□□ -2.18
SQLE-202ENST00000518604 SLCO1A2P46721 670 aa1.44□□□□□ -2.18
SQLE-202ENST00000518604 C5orf46Q6UWT4 87 aa1.44□□□□□ -2.18
SQLE-202ENST00000518604 SLC51BQ86UW2 128 aa1.44□□□□□ -2.18
SQLE-202ENST00000518604 LRRC28Q86X40 367 aaPredicted RBP1.44□□□□□ -2.18
SQLE-202ENST00000518604 OR1L8Q8NGR8 309 aa1.44□□□□□ -2.18
SQLE-202ENST00000518604 DDI1Q8WTU0 396 aa1.44□□□□□ -2.18
SQLE-202ENST00000518604 RAB2BQ8WUD1 216 aa1.44□□□□□ -2.18
SQLE-202ENST00000518604 RNF133Q8WVZ7 376 aa1.44□□□□□ -2.18
SQLE-202ENST00000518604 GNPNAT1Q96EK6 184 aaPredicted RBP1.44□□□□□ -2.18
SQLE-202ENST00000518604 C8orf76Q96K31 380 aa1.44□□□□□ -2.18
SQLE-202ENST00000518604 DOHHQ9BU89 302 aa1.44□□□□□ -2.18
SQLE-202ENST00000518604 SPZ1Q9BXG8 430 aa1.44□□□□□ -2.18
SQLE-202ENST00000518604 TTTY13Q9BZ97 58 aa1.44□□□□□ -2.18
SQLE-202ENST00000518604 XAGE1AQ9HD64 81 aa1.44□□□□□ -2.18
SQLE-202ENST00000518604 DKKL1Q9UK85 242 aa1.44□□□□□ -2.18
SQLE-202ENST00000518604 KIF15Q9NS87 1388 aa1.44□□□□□ -2.18
SQLE-202ENST00000518604 NYNRINQ9P2P1 1898 aaKnown RBP1.43□□□□□ -2.18
SQLE-202ENST00000518604 NCKAP5O14513 1909 aa1.43□□□□□ -2.18
SQLE-202ENST00000518604 PFDN6O15212 129 aa1.43□□□□□ -2.18
SQLE-202ENST00000518604 TPI1P60174 286 aa1.43□□□□□ -2.18
SQLE-202ENST00000518604 MYL6P60660 151 aa1.43□□□□□ -2.18
SQLE-202ENST00000518604 UBE2IP63279 158 aaKnown RBP1.43□□□□□ -2.18
SQLE-202ENST00000518604 CTAG1AP78358 180 aa1.43□□□□□ -2.18
SQLE-202ENST00000518604 SLC38A11Q08AI6 406 aa1.43□□□□□ -2.18
SQLE-202ENST00000518604 LRRC75BQ2VPJ9 315 aa1.43□□□□□ -2.18
SQLE-202ENST00000518604 CCDC122Q5T0U0 273 aa1.43□□□□□ -2.18
SQLE-202ENST00000518604 FAM151BQ6UXP7 276 aa1.43□□□□□ -2.18
SQLE-202ENST00000518604 RASSF6Q6ZTQ3 369 aa1.43□□□□□ -2.18
SQLE-202ENST00000518604 TMEM161BQ8NDZ6 487 aa1.43□□□□□ -2.18
SQLE-202ENST00000518604 OR51T1Q8NGJ9 327 aa1.43□□□□□ -2.18
SQLE-202ENST00000518604 TMA16Q96EY4 203 aaKnown RBP1.43□□□□□ -2.18
SQLE-202ENST00000518604 PARD6GQ9BYG4 376 aaPredicted RBP1.43□□□□□ -2.18
SQLE-202ENST00000518604 OR51I2Q9H344 312 aa1.43□□□□□ -2.18
SQLE-202ENST00000518604 HRASLSQ9HDD0 168 aa1.43□□□□□ -2.18
SQLE-202ENST00000518604 FKBP14Q9NWM8 211 aa1.43□□□□□ -2.18
SQLE-202ENST00000518604 UBAP1Q9NZ09 502 aa1.43□□□□□ -2.18
SQLE-202ENST00000518604 CRCT1Q9UGL9 99 aa1.43□□□□□ -2.18
SQLE-202ENST00000518604 TIMM9Q9Y5J7 89 aa1.43□□□□□ -2.18
SQLE-202ENST00000518604 CR1P17927 2039 aa1.43□□□□□ -2.18
SQLE-202ENST00000518604 CHD5Q8TDI0 1954 aa1.43□□□□□ -2.18
SQLE-202ENST00000518604 COX7A2LO14548 114 aa1.42□□□□□ -2.18
SQLE-202ENST00000518604 CREBL2O60519 120 aaPredicted RBP1.42□□□□□ -2.18
SQLE-202ENST00000518604 TYMSP04818 313 aa1.42□□□□□ -2.18
SQLE-202ENST00000518604 SERPINA7P05543 415 aa1.42□□□□□ -2.18
SQLE-202ENST00000518604 COX5BP10606 129 aa1.42□□□□□ -2.18
SQLE-202ENST00000518604 MYL12AP19105 171 aa1.42□□□□□ -2.18
SQLE-202ENST00000518604 CCR2P41597 374 aa1.42□□□□□ -2.18
SQLE-202ENST00000518604 HIST1H4AP62805 103 aaKnown RBP1.42□□□□□ -2.18
SQLE-202ENST00000518604 TPM4P67936 248 aa1.42□□□□□ -2.18
SQLE-202ENST00000518604 PPP1R1AQ13522 171 aa1.42□□□□□ -2.18
SQLE-202ENST00000518604 BATFQ16520 125 aa1.42□□□□□ -2.18
SQLE-202ENST00000518604 CDKL4Q5MAI5 379 aa1.42□□□□□ -2.18
SQLE-202ENST00000518604 Q6ZSA8 131 aa1.42□□□□□ -2.18
SQLE-202ENST00000518604 KTN1-AS1Q86SY8 53 aa1.42□□□□□ -2.18
SQLE-202ENST00000518604 TMEM156Q8N614 296 aa1.42□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms