RNA–Protein interactions for RNA: ENST00000515418.1

CPNE4-213, Transcript of copine 4, humanhuman

TSL 5

Gene CPNE4, Length 1,958 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-213ENST00000515418 CST7O76096 145 aa7.42□□□□□ -1.22
CPNE4-213ENST00000515418 RBP4P02753 201 aa7.42□□□□□ -1.22
CPNE4-213ENST00000515418 MYOD1P15172 320 aa7.42□□□□□ -1.22
CPNE4-213ENST00000515418 NQO2P16083 231 aa7.42□□□□□ -1.22
CPNE4-213ENST00000515418 C4BPBP20851 252 aa7.42□□□□□ -1.22
CPNE4-213ENST00000515418 EXOSC2Q13868 293 aaKnown RBP7.42□□□□□ -1.22
CPNE4-213ENST00000515418 HCP5Q6MZN7 132 aa7.42□□□□□ -1.22
CPNE4-213ENST00000515418 ALKAL2Q6UX46 152 aa7.42□□□□□ -1.22
CPNE4-213ENST00000515418 VMO1Q7Z5L0 202 aa7.42□□□□□ -1.22
CPNE4-213ENST00000515418 TGIF2LXQ8IUE1 241 aa7.42□□□□□ -1.22
CPNE4-213ENST00000515418 SLC7A5P1Q8MH63 180 aa7.42□□□□□ -1.22
CPNE4-213ENST00000515418 OR5AN1Q8NGI8 311 aa7.42□□□□□ -1.22
CPNE4-213ENST00000515418 OR4P4Q8NGL7 312 aa7.42□□□□□ -1.22
CPNE4-213ENST00000515418 OR13D1Q8NGV5 346 aa7.42□□□□□ -1.22
CPNE4-213ENST00000515418 ARPC5LQ9BPX5 153 aa7.42□□□□□ -1.22
CPNE4-213ENST00000515418 PCGF1Q9BSM1 259 aa7.42□□□□□ -1.22
CPNE4-213ENST00000515418 QTRT1Q9BXR0 403 aaKnown RBP7.42□□□□□ -1.22
CPNE4-213ENST00000515418 TMEM140Q9NV12 185 aa7.42□□□□□ -1.22
CPNE4-213ENST00000515418 PAIP2BQ9ULR5 123 aaKnown RBP7.42□□□□□ -1.22
CPNE4-213ENST00000515418 TEX15Q9BXT5 2789 aa7.41□□□□□ -1.22
CPNE4-213ENST00000515418 PIGBOS1A0A0B4J2F0 54 aa7.41□□□□□ -1.22
CPNE4-213ENST00000515418 VWC2LB2RUY7 222 aa7.41□□□□□ -1.22
CPNE4-213ENST00000515418 ENSAO43768 121 aaKnown RBP7.41□□□□□ -1.22
CPNE4-213ENST00000515418 ATG12O94817 140 aa7.41□□□□□ -1.22
CPNE4-213ENST00000515418 ARG1P05089 322 aa7.41□□□□□ -1.22
CPNE4-213ENST00000515418 PRTN3P24158 256 aa7.41□□□□□ -1.22
CPNE4-213ENST00000515418 KIR2DS2P43631 304 aa7.41□□□□□ -1.22
CPNE4-213ENST00000515418 P2RY1P47900 373 aa7.41□□□□□ -1.22
CPNE4-213ENST00000515418 UBE2KP61086 200 aa7.41□□□□□ -1.22
CPNE4-213ENST00000515418 VAMP2P63027 116 aa7.41□□□□□ -1.22
CPNE4-213ENST00000515418 TNFRSF9Q07011 255 aa7.41□□□□□ -1.22
CPNE4-213ENST00000515418 RTL8BQ17RB0 113 aa7.41□□□□□ -1.22
CPNE4-213ENST00000515418 OR4A47Q6IF82 309 aa7.41□□□□□ -1.22
CPNE4-213ENST00000515418 LHFPL4Q7Z7J7 247 aa7.41□□□□□ -1.22
CPNE4-213ENST00000515418 SLC51BQ86UW2 128 aa7.41□□□□□ -1.22
CPNE4-213ENST00000515418 OR8H3Q8N146 312 aa7.41□□□□□ -1.22
CPNE4-213ENST00000515418 OR2C3Q8N628 320 aa7.41□□□□□ -1.22
CPNE4-213ENST00000515418 TNFRSF14Q92956 283 aa7.41□□□□□ -1.22
CPNE4-213ENST00000515418 ZDHHC16Q969W1 377 aa7.41□□□□□ -1.22
CPNE4-213ENST00000515418 RBKSQ9H477 322 aa7.41□□□□□ -1.22
CPNE4-213ENST00000515418 WFDC1Q9HC57 220 aa7.41□□□□□ -1.22
CPNE4-213ENST00000515418 ZFP57Q9NU63 452 aa7.41□□□□□ -1.22
CPNE4-213ENST00000515418 HILPDAQ9Y5L2 63 aa7.41□□□□□ -1.22
CPNE4-213ENST00000515418 ZNF469Q96JG9 3925 aaPredicted RBP7.4□□□□□ -1.22
CPNE4-213ENST00000515418 IGHV2-70DA0A0C4DH43 119 aa7.4□□□□□ -1.22
CPNE4-213ENST00000515418 RNASEK-C17orf49H0YIS7 233 aa7.4□□□□□ -1.22
CPNE4-213ENST00000515418 M0R1W7 72 aa7.4□□□□□ -1.22
CPNE4-213ENST00000515418 SHOXO15266 292 aa7.4□□□□□ -1.22
CPNE4-213ENST00000515418 PVALBP20472 110 aaPredicted RBP7.4□□□□□ -1.22
CPNE4-213ENST00000515418 ZNF137PP52743 207 aa7.4□□□□□ -1.22
CPNE4-213ENST00000515418 ERVK-16P61578 105 aa7.4□□□□□ -1.22
CPNE4-213ENST00000515418 RELBQ01201 579 aa7.4□□□□□ -1.22
CPNE4-213ENST00000515418 RPL7L1Q6DKI1 246 aaKnown RBP7.4□□□□□ -1.22
CPNE4-213ENST00000515418 TMEM217Q8N7C4 229 aa7.4□□□□□ -1.22
CPNE4-213ENST00000515418 BEND2Q8NDZ0 799 aa7.4□□□□□ -1.22
CPNE4-213ENST00000515418 OR4A16Q8NH70 328 aa7.4□□□□□ -1.22
CPNE4-213ENST00000515418 C17orf50Q8WW18 174 aa7.4□□□□□ -1.22
CPNE4-213ENST00000515418 ST8SIA2Q92186 375 aa7.4□□□□□ -1.22
CPNE4-213ENST00000515418 LHX4Q969G2 390 aa7.4□□□□□ -1.22
CPNE4-213ENST00000515418 MARVELD3Q96A59 401 aa7.4□□□□□ -1.22
CPNE4-213ENST00000515418 PSMG3-AS1Q96PY0 264 aa7.4□□□□□ -1.22
CPNE4-213ENST00000515418 BARX1Q9HBU1 254 aaPredicted RBP7.4□□□□□ -1.22
CPNE4-213ENST00000515418 COA4Q9NYJ1 87 aa7.4□□□□□ -1.22
CPNE4-213ENST00000515418 HSPB7Q9UBY9 170 aa7.4□□□□□ -1.22
CPNE4-213ENST00000515418 INSIG2Q9Y5U4 225 aa7.4□□□□□ -1.22
CPNE4-213ENST00000515418 PRRC2AP48634 2157 aaKnown RBP7.4□□□□□ -1.22
CPNE4-213ENST00000515418 LY6LH3BQJ8 138 aa7.4□□□□□ -1.23
CPNE4-213ENST00000515418 GPR137BO60478 399 aa7.4□□□□□ -1.23
CPNE4-213ENST00000515418 IFNA17P01571 189 aa7.4□□□□□ -1.23
CPNE4-213ENST00000515418 APOA2P02652 100 aa7.4□□□□□ -1.23
CPNE4-213ENST00000515418 OPN1MWP04001 364 aa7.4□□□□□ -1.23
CPNE4-213ENST00000515418 OPN1MW2P0DN77 364 aa7.4□□□□□ -1.23
CPNE4-213ENST00000515418 OPN1MW3P0DN78 364 aa7.4□□□□□ -1.23
CPNE4-213ENST00000515418 HTR2BP41595 481 aa7.4□□□□□ -1.23
CPNE4-213ENST00000515418 RPS16P62249 146 aaKnown RBP7.4□□□□□ -1.23
CPNE4-213ENST00000515418 EWSR1Q01844 656 aaKnown RBP eCLIP7.4□□□□□ -1.23
CPNE4-213ENST00000515418 TMEM267Q0VDI3 215 aaPredicted RBP7.4□□□□□ -1.23
CPNE4-213ENST00000515418 CLEC12BQ2HXU8 276 aa7.4□□□□□ -1.23
CPNE4-213ENST00000515418 GPR157Q5UAW9 335 aa7.4□□□□□ -1.23
CPNE4-213ENST00000515418 C1orf122Q6ZSJ8 110 aa7.4□□□□□ -1.23
CPNE4-213ENST00000515418 MOB3BQ86TA1 216 aa7.4□□□□□ -1.23
CPNE4-213ENST00000515418 TMEM252Q8N6L7 170 aa7.4□□□□□ -1.23
CPNE4-213ENST00000515418 OR11H6Q8NGC7 330 aa7.4□□□□□ -1.23
CPNE4-213ENST00000515418 FLYWCH2Q96CP2 140 aaKnown RBP7.4□□□□□ -1.23
CPNE4-213ENST00000515418 GSX2Q9BZM3 304 aa7.4□□□□□ -1.23
CPNE4-213ENST00000515418 SIRPDQ9H106 197 aa7.4□□□□□ -1.23
CPNE4-213ENST00000515418 LYRM2Q9NU23 88 aaPredicted RBP7.4□□□□□ -1.23
CPNE4-213ENST00000515418 PSENENQ9NZ42 101 aa7.4□□□□□ -1.23
CPNE4-213ENST00000515418 FBXL17Q9UF56 701 aa7.4□□□□□ -1.23
CPNE4-213ENST00000515418 IGHV1-3A0A0C4DH29 117 aa7.39□□□□□ -1.23
CPNE4-213ENST00000515418 NDUFS8O00217 210 aa7.39□□□□□ -1.23
CPNE4-213ENST00000515418 TOX4O94842 621 aa7.39□□□□□ -1.23
CPNE4-213ENST00000515418 HRASP01112 189 aa7.39□□□□□ -1.23
CPNE4-213ENST00000515418 IFNA7P01567 189 aa7.39□□□□□ -1.23
CPNE4-213ENST00000515418 GAPDHP04406 335 aaKnown RBP7.39□□□□□ -1.23
CPNE4-213ENST00000515418 CD24P25063 80 aa7.39□□□□□ -1.23
CPNE4-213ENST00000515418 CLINT1Q14677 625 aa7.39□□□□□ -1.23
CPNE4-213ENST00000515418 SPANXN5Q5MJ07 72 aa7.39□□□□□ -1.23
CPNE4-213ENST00000515418 FAM74A1Q5RGS3 127 aa7.39□□□□□ -1.23
CPNE4-213ENST00000515418 ZNF767PQ75MW2 155 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms