RNA–Protein interactions for RNA: ENST00000515223.1

TRIM41-207, Transcript of tripartite motif containing 41, humanhuman

TSL 2

Gene TRIM41, Length 5,707 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41-207ENST00000515223 TMEM106BQ9NUM4 274 aa13.71□□□□□ -0.22
TRIM41-207ENST00000515223 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.7□□□□□ -0.22
TRIM41-207ENST00000515223 C17orf51A8MQB3 221 aa13.7□□□□□ -0.22
TRIM41-207ENST00000515223 PLAUP00749 431 aa13.7□□□□□ -0.22
TRIM41-207ENST00000515223 FAM27E3Q08E93 113 aa13.7□□□□□ -0.22
TRIM41-207ENST00000515223 TMEM222Q9H0R3 208 aa13.7□□□□□ -0.22
TRIM41-207ENST00000515223 A0A0G2JLM5 398 aa13.7□□□□□ -0.22
TRIM41-207ENST00000515223 TRGV3P03979 118 aa13.7□□□□□ -0.22
TRIM41-207ENST00000515223 SCARF2Q96GP6 870 aaPredicted RBP13.7□□□□□ -0.22
TRIM41-207ENST00000515223 WNT5BQ9H1J7 359 aa13.7□□□□□ -0.22
TRIM41-207ENST00000515223 LHFPL6Q9Y693 200 aa13.7□□□□□ -0.22
TRIM41-207ENST00000515223 PSME4Q14997 1843 aa13.7□□□□□ -0.22
TRIM41-207ENST00000515223 CX3CL1P78423 397 aa13.7□□□□□ -0.22
TRIM41-207ENST00000515223 ADIPOQQ15848 244 aa13.7□□□□□ -0.22
TRIM41-207ENST00000515223 SNAI3Q3KNW1 292 aa13.7□□□□□ -0.22
TRIM41-207ENST00000515223 SSBP3Q9BWW4 388 aaPredicted RBP13.7□□□□□ -0.22
TRIM41-207ENST00000515223 ANK1P16157 1881 aa13.7□□□□□ -0.22
TRIM41-207ENST00000515223 KLF4O43474 513 aa13.69□□□□□ -0.22
TRIM41-207ENST00000515223 CTSBP07858 339 aa13.69□□□□□ -0.22
TRIM41-207ENST00000515223 UNC119Q13432 240 aa13.69□□□□□ -0.22
TRIM41-207ENST00000515223 FGFRL1Q8N441 504 aa13.69□□□□□ -0.22
TRIM41-207ENST00000515223 ELOA3CA0A087WX78 387 aaPredicted RBP13.69□□□□□ -0.22
TRIM41-207ENST00000515223 BTF3P20290 206 aaKnown RBP13.69□□□□□ -0.22
TRIM41-207ENST00000515223 PET117Q6UWS5 81 aa13.69□□□□□ -0.22
TRIM41-207ENST00000515223 ANKRD36A6QL64 1941 aa13.69□□□□□ -0.22
TRIM41-207ENST00000515223 KBTBD11O94819 623 aa13.69□□□□□ -0.22
TRIM41-207ENST00000515223 TIAF1O95411 115 aa13.69□□□□□ -0.22
TRIM41-207ENST00000515223 DPM3Q9P2X0 92 aa13.69□□□□□ -0.22
TRIM41-207ENST00000515223 SPTBP11277 2137 aa13.69□□□□□ -0.22
TRIM41-207ENST00000515223 LTBP1Q14766 1721 aa13.69□□□□□ -0.22
TRIM41-207ENST00000515223 LOC389332A0A1B0GUA5 103 aa13.69□□□□□ -0.22
TRIM41-207ENST00000515223 FAM90A26D6RGX4 464 aa13.69□□□□□ -0.22
TRIM41-207ENST00000515223 GCGP01275 180 aa13.69□□□□□ -0.22
TRIM41-207ENST00000515223 SMIM10L1P0DMW3 83 aa13.69□□□□□ -0.22
TRIM41-207ENST00000515223 CKS2P33552 79 aa13.69□□□□□ -0.22
TRIM41-207ENST00000515223 SMIM10Q96HG1 83 aa13.69□□□□□ -0.22
TRIM41-207ENST00000515223 C7orf69Q9H7B7 122 aa13.69□□□□□ -0.22
TRIM41-207ENST00000515223 ZNF703Q9H7S9 590 aaPredicted RBP13.69□□□□□ -0.22
TRIM41-207ENST00000515223 DNAJC4Q9NNZ3 241 aa13.69□□□□□ -0.22
TRIM41-207ENST00000515223 TBX15Q96SF7 602 aa13.68□□□□□ -0.22
TRIM41-207ENST00000515223 RBKSQ9H477 322 aa13.68□□□□□ -0.22
TRIM41-207ENST00000515223 TNFSF10P50591 281 aa13.68□□□□□ -0.22
TRIM41-207ENST00000515223 ZFP30Q9Y2G7 519 aa13.68□□□□□ -0.22
TRIM41-207ENST00000515223 BRCA1P38398 1863 aaKnown RBP13.68□□□□□ -0.22
TRIM41-207ENST00000515223 PLXNA1Q9UIW2 1896 aa13.68□□□□□ -0.22
TRIM41-207ENST00000515223 LCN2P80188 198 aa13.68□□□□□ -0.22
TRIM41-207ENST00000515223 TMEM252Q8N6L7 170 aa13.68□□□□□ -0.22
TRIM41-207ENST00000515223 FUT9Q9Y231 359 aa13.68□□□□□ -0.22
TRIM41-207ENST00000515223 PGLYRP1O75594 196 aaPredicted RBP13.68□□□□□ -0.22
TRIM41-207ENST00000515223 ANOS1P23352 680 aa13.68□□□□□ -0.22
TRIM41-207ENST00000515223 GLIPR1P48060 266 aa13.68□□□□□ -0.22
TRIM41-207ENST00000515223 LINC01590Q5TEZ4 76 aa13.68□□□□□ -0.22
TRIM41-207ENST00000515223 C1orf162Q8NEQ5 155 aaPredicted RBP13.68□□□□□ -0.22
TRIM41-207ENST00000515223 OR51G1Q8NGK1 321 aa13.68□□□□□ -0.22
TRIM41-207ENST00000515223 KLK2P20151 261 aa13.67□□□□□ -0.22
TRIM41-207ENST00000515223 AQP3Q92482 292 aa13.67□□□□□ -0.22
TRIM41-207ENST00000515223 SIGLEC12Q96PQ1 595 aa13.67□□□□□ -0.22
TRIM41-207ENST00000515223 A6NDN8 102 aa13.67□□□□□ -0.22
TRIM41-207ENST00000515223 MPTX1A8MV57 137 aa13.67□□□□□ -0.22
TRIM41-207ENST00000515223 COX6CP09669 75 aa13.67□□□□□ -0.22
TRIM41-207ENST00000515223 HKR1P10072 659 aa13.67□□□□□ -0.22
TRIM41-207ENST00000515223 RUNX1Q01196 453 aa13.67□□□□□ -0.22
TRIM41-207ENST00000515223 PRSS8Q16651 343 aa13.67□□□□□ -0.22
TRIM41-207ENST00000515223 RAXQ9Y2V3 346 aa13.67□□□□□ -0.22
TRIM41-207ENST00000515223 MARCH11A6NNE9 402 aa13.67□□□□□ -0.22
TRIM41-207ENST00000515223 IL36RNQ9UBH0 155 aa13.67□□□□□ -0.22
TRIM41-207ENST00000515223 LEAP2Q969E1 77 aa13.67□□□□□ -0.22
TRIM41-207ENST00000515223 AURKAIP1Q9NWT8 199 aaPredicted RBP13.67□□□□□ -0.22
TRIM41-207ENST00000515223 PATJQ8NI35 1801 aa13.67□□□□□ -0.22
TRIM41-207ENST00000515223 IGKV1D-42A0A075B6H8 117 aa13.67□□□□□ -0.22
TRIM41-207ENST00000515223 A8MXK9 166 aa13.67□□□□□ -0.22
TRIM41-207ENST00000515223 CD99P14209 185 aa13.67□□□□□ -0.22
TRIM41-207ENST00000515223 IGLV3-21P80748 117 aaPredicted RBP13.67□□□□□ -0.22
TRIM41-207ENST00000515223 FAM159AQ6UWV7 190 aa13.67□□□□□ -0.22
TRIM41-207ENST00000515223 TUBD1Q9UJT1 453 aa13.67□□□□□ -0.22
TRIM41-207ENST00000515223 SCN2AQ99250 2005 aa13.66□□□□□ -0.22
TRIM41-207ENST00000515223 A0A087WV48 116 aa13.66□□□□□ -0.22
TRIM41-207ENST00000515223 TRGC1P0CF51 173 aa13.66□□□□□ -0.22
TRIM41-207ENST00000515223 P2RY4P51582 365 aa13.66□□□□□ -0.22
TRIM41-207ENST00000515223 C2orf83Q53S99 150 aa13.66□□□□□ -0.22
TRIM41-207ENST00000515223 CYB561D1Q8N8Q1 229 aa13.66□□□□□ -0.22
TRIM41-207ENST00000515223 ATP5IP56385 69 aaPredicted RBP13.66□□□□□ -0.22
TRIM41-207ENST00000515223 RNASE6Q93091 150 aaKnown RBP13.66□□□□□ -0.22
TRIM41-207ENST00000515223 GPR132Q9UNW8 380 aa13.66□□□□□ -0.22
TRIM41-207ENST00000515223 CBY1Q9Y3M2 126 aa13.66□□□□□ -0.22
TRIM41-207ENST00000515223 BRWD3Q6RI45 1802 aa13.66□□□□□ -0.22
TRIM41-207ENST00000515223 BCL2P10415 239 aa13.66□□□□□ -0.22
TRIM41-207ENST00000515223 CHD5Q8TDI0 1954 aa13.66□□□□□ -0.22
TRIM41-207ENST00000515223 IFITM10A6NMD0 228 aa13.66□□□□□ -0.22
TRIM41-207ENST00000515223 C8orf88P0DMB2 117 aa13.66□□□□□ -0.22
TRIM41-207ENST00000515223 UBE2V2Q15819 145 aa13.66□□□□□ -0.22
TRIM41-207ENST00000515223 RAB37Q96AX2 223 aa13.66□□□□□ -0.22
TRIM41-207ENST00000515223 CTHRC1Q96CG8 243 aa13.66□□□□□ -0.22
TRIM41-207ENST00000515223 SMDT1Q9H4I9 107 aa13.66□□□□□ -0.22
TRIM41-207ENST00000515223 GDF9O60383 454 aa13.65□□□□□ -0.22
TRIM41-207ENST00000515223 C1orf100Q5SVJ3 147 aa13.65□□□□□ -0.22
TRIM41-207ENST00000515223 C10orf128Q5T292 105 aa13.65□□□□□ -0.22
TRIM41-207ENST00000515223 IBA57Q5T440 356 aaKnown RBP13.65□□□□□ -0.22
TRIM41-207ENST00000515223 SGMS2Q8NHU3 365 aa13.65□□□□□ -0.22
TRIM41-207ENST00000515223 AICDAQ9GZX7 198 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms