RNA–Protein interactions for RNA: ENST00000512590.6

VCAN-208, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 5,923 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-208ENST00000512590 SLC17A5Q9NRA2 495 aa7.62□□□□□ -1.19
VCAN-208ENST00000512590 KCNE1BA0A087WTH5 132 aa7.62□□□□□ -1.19
VCAN-208ENST00000512590 LINC00587B1AMM8 73 aa7.62□□□□□ -1.19
VCAN-208ENST00000512590 CHKB-CPT1BH3BT56 60 aa7.62□□□□□ -1.19
VCAN-208ENST00000512590 ZNHIT1O43257 154 aa7.62□□□□□ -1.19
VCAN-208ENST00000512590 UPK3AO75631 287 aa7.62□□□□□ -1.19
VCAN-208ENST00000512590 HOXD13P35453 343 aa7.62□□□□□ -1.19
VCAN-208ENST00000512590 FXYD7P58549 80 aa7.62□□□□□ -1.19
VCAN-208ENST00000512590 PAX2Q02962 417 aa7.62□□□□□ -1.19
VCAN-208ENST00000512590 ACTL10Q5JWF8 245 aa7.62□□□□□ -1.19
VCAN-208ENST00000512590 PIP4P2Q8N4L2 257 aa7.62□□□□□ -1.19
VCAN-208ENST00000512590 PRSS23O95084 383 aa7.62□□□□□ -1.19
VCAN-208ENST00000512590 WDR82Q6UXN9 313 aa7.62□□□□□ -1.19
VCAN-208ENST00000512590 NRG4Q8WWG1 115 aa7.62□□□□□ -1.19
VCAN-208ENST00000512590 FLRT3Q9NZU0 649 aa7.62□□□□□ -1.19
VCAN-208ENST00000512590 ELOA3CA0A087WX78 387 aaPredicted RBP7.61□□□□□ -1.19
VCAN-208ENST00000512590 BCL2L11O43521 198 aa7.61□□□□□ -1.19
VCAN-208ENST00000512590 GGCTO75223 188 aaKnown RBP7.61□□□□□ -1.19
VCAN-208ENST00000512590 TNFSF13O75888 250 aa7.61□□□□□ -1.19
VCAN-208ENST00000512590 SFTA3P0C7M3 94 aa7.61□□□□□ -1.19
VCAN-208ENST00000512590 EIF4EBP2Q13542 120 aaPredicted RBP7.61□□□□□ -1.19
VCAN-208ENST00000512590 ZNF146Q15072 292 aa7.61□□□□□ -1.19
VCAN-208ENST00000512590 SPNS2Q8IVW8 549 aa7.61□□□□□ -1.19
VCAN-208ENST00000512590 DNAJC4Q9NNZ3 241 aa7.61□□□□□ -1.19
VCAN-208ENST00000512590 A0A0U1RRA0 63 aa7.61□□□□□ -1.19
VCAN-208ENST00000512590 CBLN1P23435 193 aa7.61□□□□□ -1.19
VCAN-208ENST00000512590 RNF182Q8N6D2 247 aa7.61□□□□□ -1.19
VCAN-208ENST00000512590 SELENOKQ9Y6D0 94 aa7.61□□□□□ -1.19
VCAN-208ENST00000512590 PPYP01298 95 aa7.61□□□□□ -1.19
VCAN-208ENST00000512590 HBDP02042 147 aa7.61□□□□□ -1.19
VCAN-208ENST00000512590 CISD3P0C7P0 127 aa7.61□□□□□ -1.19
VCAN-208ENST00000512590 GPX2P18283 190 aa7.61□□□□□ -1.19
VCAN-208ENST00000512590 C1orf53Q5VUE5 145 aa7.61□□□□□ -1.19
VCAN-208ENST00000512590 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP7.61□□□□□ -1.19
VCAN-208ENST00000512590 MBD3L4A6NDZ8 208 aaPredicted RBP7.61□□□□□ -1.19
VCAN-208ENST00000512590 MBD3L3A6NE82 208 aaPredicted RBP7.61□□□□□ -1.19
VCAN-208ENST00000512590 MBD3L5A6NJ08 208 aaPredicted RBP7.61□□□□□ -1.19
VCAN-208ENST00000512590 C5orf67F2Z3F1 127 aa7.61□□□□□ -1.19
VCAN-208ENST00000512590 CD160O95971 181 aa7.61□□□□□ -1.19
VCAN-208ENST00000512590 C1QAP02745 245 aa7.61□□□□□ -1.19
VCAN-208ENST00000512590 TEX45Q8NA69 505 aa7.61□□□□□ -1.19
VCAN-208ENST00000512590 OR10AG1Q8NH19 301 aa7.61□□□□□ -1.19
VCAN-208ENST00000512590 MBD3L2Q8NHZ7 208 aaPredicted RBP7.61□□□□□ -1.19
VCAN-208ENST00000512590 A0A0J9YW62 118 aa7.6□□□□□ -1.19
VCAN-208ENST00000512590 OR11H1Q8NG94 326 aa7.6□□□□□ -1.19
VCAN-208ENST00000512590 OR11H2Q8NH07 326 aa7.6□□□□□ -1.19
VCAN-208ENST00000512590 TRAV41A0A0B4J266 112 aa7.6□□□□□ -1.19
VCAN-208ENST00000512590 PRCDQ00LT1 54 aa7.6□□□□□ -1.19
VCAN-208ENST00000512590 TCEAL1Q15170 157 aa7.6□□□□□ -1.19
VCAN-208ENST00000512590 TAL2Q16559 108 aa7.6□□□□□ -1.19
VCAN-208ENST00000512590 TMEM136Q6ZRR5 245 aa7.6□□□□□ -1.19
VCAN-208ENST00000512590 TMEM105Q8N8V8 129 aa7.6□□□□□ -1.19
VCAN-208ENST00000512590 ZNF114Q8NC26 417 aa7.6□□□□□ -1.19
VCAN-208ENST00000512590 ISG20L2Q9H9L3 353 aaKnown RBP7.6□□□□□ -1.19
VCAN-208ENST00000512590 JPT1Q9UK76 154 aa7.6□□□□□ -1.19
VCAN-208ENST00000512590 PHRF1Q9P1Y6 1649 aaKnown RBP7.6□□□□□ -1.19
VCAN-208ENST00000512590 IGHV3-73A0A0B4J1V6 119 aa7.6□□□□□ -1.19
VCAN-208ENST00000512590 ZNF883P0CG24 379 aa7.6□□□□□ -1.19
VCAN-208ENST00000512590 PPP1R1AQ13522 171 aa7.6□□□□□ -1.19
VCAN-208ENST00000512590 IBA57Q5T440 356 aaKnown RBP7.6□□□□□ -1.19
VCAN-208ENST00000512590 RASL11AQ6T310 242 aa7.6□□□□□ -1.19
VCAN-208ENST00000512590 MORN3Q6PF18 240 aaPredicted RBP7.6□□□□□ -1.19
VCAN-208ENST00000512590 PQLC2Q6ZP29 291 aa7.6□□□□□ -1.19
VCAN-208ENST00000512590 VKORC1L1Q8N0U8 176 aa7.6□□□□□ -1.19
VCAN-208ENST00000512590 DRAM1Q8N682 238 aa7.6□□□□□ -1.19
VCAN-208ENST00000512590 ZNF385AQ96PM9 386 aaKnown RBP7.6□□□□□ -1.19
VCAN-208ENST00000512590 AICDAQ9GZX7 198 aa7.6□□□□□ -1.19
VCAN-208ENST00000512590 LINC00527Q9UJ94 153 aa7.6□□□□□ -1.19
VCAN-208ENST00000512590 GLRXP35754 106 aa7.6□□□□□ -1.19
VCAN-208ENST00000512590 ICAM4Q14773 271 aa7.6□□□□□ -1.19
VCAN-208ENST00000512590 RIPPLY2Q5TAB7 128 aa7.6□□□□□ -1.19
VCAN-208ENST00000512590 OR5P3Q8WZ94 311 aa7.6□□□□□ -1.19
VCAN-208ENST00000512590 RNF183Q96D59 192 aa7.6□□□□□ -1.19
VCAN-208ENST00000512590 DUSP21Q9H596 190 aa7.6□□□□□ -1.19
VCAN-208ENST00000512590 C1QTNF9BB2RNN3 333 aa7.59□□□□□ -1.19
VCAN-208ENST00000512590 ERVH48-1M5A8F1 160 aa7.59□□□□□ -1.19
VCAN-208ENST00000512590 P2RY1P47900 373 aa7.59□□□□□ -1.19
VCAN-208ENST00000512590 UBR1Q8IWV7 1749 aa7.59□□□□□ -1.19
VCAN-208ENST00000512590 MYH11P35749 1972 aa7.59□□□□□ -1.19
VCAN-208ENST00000512590 PSG4Q00888 419 aa7.59□□□□□ -1.19
VCAN-208ENST00000512590 ID3Q02535 119 aa7.59□□□□□ -1.19
VCAN-208ENST00000512590 PAX8Q06710 450 aa7.59□□□□□ -1.19
VCAN-208ENST00000512590 NBR2O15453 112 aa7.59□□□□□ -1.19
VCAN-208ENST00000512590 IGHV3-48P01763 117 aa7.59□□□□□ -1.19
VCAN-208ENST00000512590 SMIM13P0DJ93 91 aa7.59□□□□□ -1.19
VCAN-208ENST00000512590 RHOGP84095 191 aa7.59□□□□□ -1.19
VCAN-208ENST00000512590 VWC2Q2TAL6 325 aa7.59□□□□□ -1.19
VCAN-208ENST00000512590 ZNF501Q96CX3 271 aaPredicted RBP7.59□□□□□ -1.19
VCAN-208ENST00000512590 RHOVQ96L33 236 aa7.59□□□□□ -1.19
VCAN-208ENST00000512590 KLF12Q9Y4X4 402 aa7.59□□□□□ -1.19
VCAN-208ENST00000512590 IGKV2D-24A0A075B6R9 120 aa7.59□□□□□ -1.2
VCAN-208ENST00000512590 C15orf61A6NNL5 157 aa7.59□□□□□ -1.2
VCAN-208ENST00000512590 ADRB1P08588 477 aa7.59□□□□□ -1.2
VCAN-208ENST00000512590 PEF1Q9UBV8 284 aaKnown RBP7.59□□□□□ -1.2
VCAN-208ENST00000512590 VAX2Q9UIW0 290 aa7.59□□□□□ -1.2
VCAN-208ENST00000512590 AFDNP55196 1824 aaKnown RBP7.58□□□□□ -1.2
VCAN-208ENST00000512590 H3BUX3 64 aa7.58□□□□□ -1.2
VCAN-208ENST00000512590 HLA-DRB1P01911 266 aa7.58□□□□□ -1.2
VCAN-208ENST00000512590 CELA3AP09093 270 aa7.58□□□□□ -1.2
VCAN-208ENST00000512590 MESP2Q0VG99 397 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms