RNA–Protein interactions for RNA: ENST00000512068.1

HTT-209, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 401 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-209ENST00000512068 IGKV1-5P01602 117 aa6.59□□□□□ -1.35
HTT-209ENST00000512068 GAPDHP04406 335 aaKnown RBP6.59□□□□□ -1.35
HTT-209ENST00000512068 IGKV1D-39P04432 117 aa6.59□□□□□ -1.35
HTT-209ENST00000512068 ARG1P05089 322 aa6.59□□□□□ -1.35
HTT-209ENST00000512068 LYL1P12980 280 aa6.59□□□□□ -1.35
HTT-209ENST00000512068 MC5RP33032 325 aa6.59□□□□□ -1.35
HTT-209ENST00000512068 LGALS4P56470 323 aa6.59□□□□□ -1.35
HTT-209ENST00000512068 POLR2GP62487 172 aaKnown RBP eCLIP6.59□□□□□ -1.35
HTT-209ENST00000512068 RPP30P78346 268 aaKnown RBP6.59□□□□□ -1.35
HTT-209ENST00000512068 LCN2P80188 198 aa6.59□□□□□ -1.35
HTT-209ENST00000512068 IL15RAQ13261 267 aa6.59□□□□□ -1.35
HTT-209ENST00000512068 HLA-DRB5Q30154 266 aa6.59□□□□□ -1.35
HTT-209ENST00000512068 GPR157Q5UAW9 335 aa6.59□□□□□ -1.35
HTT-209ENST00000512068 SSX9Q7RTT3 188 aa6.59□□□□□ -1.35
HTT-209ENST00000512068 STX12Q86Y82 276 aa6.59□□□□□ -1.35
HTT-209ENST00000512068 PDPNQ86YL7 162 aa6.59□□□□□ -1.35
HTT-209ENST00000512068 PNKDQ8N490 385 aa6.59□□□□□ -1.35
HTT-209ENST00000512068 LY6G5BQ8NDX9 201 aa6.59□□□□□ -1.35
HTT-209ENST00000512068 BEND2Q8NDZ0 799 aa6.59□□□□□ -1.35
HTT-209ENST00000512068 C10orf105Q8TEF2 133 aa6.59□□□□□ -1.35
HTT-209ENST00000512068 AQP10Q96PS8 301 aa6.59□□□□□ -1.35
HTT-209ENST00000512068 CIB3Q96Q77 187 aaPredicted RBP6.59□□□□□ -1.35
HTT-209ENST00000512068 RAB40CQ96S21 281 aa6.59□□□□□ -1.35
HTT-209ENST00000512068 PCGF1Q9BSM1 259 aa6.59□□□□□ -1.35
HTT-209ENST00000512068 MRPL20Q9BYC9 149 aaKnown RBP6.59□□□□□ -1.35
HTT-209ENST00000512068 MAGT1Q9H0U3 335 aa6.59□□□□□ -1.35
HTT-209ENST00000512068 ENY2Q9NPA8 101 aa6.59□□□□□ -1.35
HTT-209ENST00000512068 SIRT7Q9NRC8 400 aa6.59□□□□□ -1.35
HTT-209ENST00000512068 COA4Q9NYJ1 87 aa6.59□□□□□ -1.35
HTT-209ENST00000512068 UBQLN2Q9UHD9 624 aa6.59□□□□□ -1.35
HTT-209ENST00000512068 FBXL7Q9UJT9 491 aa6.59□□□□□ -1.35
HTT-209ENST00000512068 ITGB1BP2Q9UKP3 347 aa6.59□□□□□ -1.35
HTT-209ENST00000512068 KPTNQ9Y664 436 aa6.59□□□□□ -1.35
HTT-209ENST00000512068 X6R8D5 127 aa6.59□□□□□ -1.35
HTT-209ENST00000512068 MYO18BQ8IUG5 2567 aa6.59□□□□□ -1.36
HTT-209ENST00000512068 SPTAN1Q13813 2472 aaKnown RBP6.58□□□□□ -1.36
HTT-209ENST00000512068 AKAP6Q13023 2319 aa6.58□□□□□ -1.36
HTT-209ENST00000512068 IGHV2-70DA0A0C4DH43 119 aa6.58□□□□□ -1.36
HTT-209ENST00000512068 RNF222A6NCQ9 220 aa6.58□□□□□ -1.36
HTT-209ENST00000512068 A8MXK9 166 aa6.58□□□□□ -1.36
HTT-209ENST00000512068 LEUTXA8MZ59 168 aa6.58□□□□□ -1.36
HTT-209ENST00000512068 H0YIZ8 118 aa6.58□□□□□ -1.36
HTT-209ENST00000512068 SYNGR2O43760 224 aa6.58□□□□□ -1.36
HTT-209ENST00000512068 SCAF4O95104 1147 aaKnown RBP6.58□□□□□ -1.36
HTT-209ENST00000512068 SPDEFO95238 335 aa6.58□□□□□ -1.36
HTT-209ENST00000512068 LY86O95711 162 aa6.58□□□□□ -1.36
HTT-209ENST00000512068 IFNA17P01571 189 aa6.58□□□□□ -1.36
HTT-209ENST00000512068 TPT1P13693 172 aaKnown RBP6.58□□□□□ -1.36
HTT-209ENST00000512068 SLC25A16P16260 332 aa6.58□□□□□ -1.36
HTT-209ENST00000512068 HTR1DP28221 377 aa6.58□□□□□ -1.36
HTT-209ENST00000512068 REG1BP48304 166 aa6.58□□□□□ -1.36
HTT-209ENST00000512068 RPS16P62249 146 aaKnown RBP6.58□□□□□ -1.36
HTT-209ENST00000512068 NDUFA5Q16718 116 aa6.58□□□□□ -1.36
HTT-209ENST00000512068 VMA21Q3ZAQ7 101 aa6.58□□□□□ -1.36
HTT-209ENST00000512068 EIF5AL1Q6IS14 154 aaKnown RBP6.58□□□□□ -1.36
HTT-209ENST00000512068 C1orf122Q6ZSJ8 110 aa6.58□□□□□ -1.36
HTT-209ENST00000512068 MOB3BQ86TA1 216 aa6.58□□□□□ -1.36
HTT-209ENST00000512068 ODF3L1Q8IXM7 274 aa6.58□□□□□ -1.36
HTT-209ENST00000512068 OR2C3Q8N628 320 aa6.58□□□□□ -1.36
HTT-209ENST00000512068 ZNF383Q8NA42 475 aa6.58□□□□□ -1.36
HTT-209ENST00000512068 OR4C13Q8NGP0 309 aa6.58□□□□□ -1.36
HTT-209ENST00000512068 VSTM2AQ8TAG5 236 aa6.58□□□□□ -1.36
HTT-209ENST00000512068 OSR1Q8TAX0 266 aaPredicted RBP6.58□□□□□ -1.36
HTT-209ENST00000512068 IGFBPL1Q8WX77 278 aa6.58□□□□□ -1.36
HTT-209ENST00000512068 FLYWCH2Q96CP2 140 aaKnown RBP6.58□□□□□ -1.36
HTT-209ENST00000512068 HARBI1Q96MB7 349 aa6.58□□□□□ -1.36
HTT-209ENST00000512068 RNF126Q9BV68 326 aa6.58□□□□□ -1.36
HTT-209ENST00000512068 TMEM140Q9NV12 185 aa6.58□□□□□ -1.36
HTT-209ENST00000512068 BEX4Q9NWD9 120 aaPredicted RBP6.58□□□□□ -1.36
HTT-209ENST00000512068 WASHC3Q9Y3C0 194 aa6.58□□□□□ -1.36
HTT-209ENST00000512068 INSIG2Q9Y5U4 225 aa6.58□□□□□ -1.36
HTT-209ENST00000512068 A0A0G2JRQ6 117 aa6.57□□□□□ -1.36
HTT-209ENST00000512068 BUB1B-PAK6H3BSN5 160 aa6.57□□□□□ -1.36
HTT-209ENST00000512068 CHST1O43916 411 aa6.57□□□□□ -1.36
HTT-209ENST00000512068 PITX3O75364 302 aa6.57□□□□□ -1.36
HTT-209ENST00000512068 TOX4O94842 621 aa6.57□□□□□ -1.36
HTT-209ENST00000512068 FGF2P09038 288 aa6.57□□□□□ -1.36
HTT-209ENST00000512068 CT45A6P0DMU7 189 aa6.57□□□□□ -1.36
HTT-209ENST00000512068 CT45A5P0DMU8 189 aa6.57□□□□□ -1.36
HTT-209ENST00000512068 CT45A7P0DMV0 189 aa6.57□□□□□ -1.36
HTT-209ENST00000512068 HKR1P10072 659 aa6.57□□□□□ -1.36
HTT-209ENST00000512068 IAPPP10997 89 aa6.57□□□□□ -1.36
HTT-209ENST00000512068 PRTN3P24158 256 aa6.57□□□□□ -1.36
HTT-209ENST00000512068 HOXA1P49639 335 aaPredicted RBP6.57□□□□□ -1.36
HTT-209ENST00000512068 ZNF137PP52743 207 aa6.57□□□□□ -1.36
HTT-209ENST00000512068 DVL1P1P54792 670 aaPredicted RBP6.57□□□□□ -1.36
HTT-209ENST00000512068 LINC00205P59089 165 aa6.57□□□□□ -1.36
HTT-209ENST00000512068 UBE2KP61086 200 aa6.57□□□□□ -1.36
HTT-209ENST00000512068 TNFRSF9Q07011 255 aa6.57□□□□□ -1.36
HTT-209ENST00000512068 BAXQ07812 192 aa6.57□□□□□ -1.36
HTT-209ENST00000512068 IZUMO4Q1ZYL8 232 aa6.57□□□□□ -1.36
HTT-209ENST00000512068 CLEC12BQ2HXU8 276 aa6.57□□□□□ -1.36
HTT-209ENST00000512068 CXorf66Q5JRM2 361 aaPredicted RBP6.57□□□□□ -1.36
HTT-209ENST00000512068 CCDC144NLQ6NUI1 221 aa6.57□□□□□ -1.36
HTT-209ENST00000512068 SLC25A24Q6NUK1 477 aa6.57□□□□□ -1.36
HTT-209ENST00000512068 TEX261Q6UWH6 196 aa6.57□□□□□ -1.36
HTT-209ENST00000512068 VMO1Q7Z5L0 202 aa6.57□□□□□ -1.36
HTT-209ENST00000512068 OR8H3Q8N146 312 aa6.57□□□□□ -1.36
HTT-209ENST00000512068 DDB2Q92466 427 aa6.57□□□□□ -1.36
HTT-209ENST00000512068 LHX4Q969G2 390 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms