RNA–Protein interactions for RNA: ENST00000511739.1

USP38-203, Transcript of ubiquitin specific peptidase 38, humanhuman

TSL 2

Gene USP38, Length 6,376 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-203ENST00000511739 IBA57Q5T440 356 aaKnown RBP4.96□□□□□ -1.62
USP38-203ENST00000511739 CADM3Q8N126 398 aa4.96□□□□□ -1.62
USP38-203ENST00000511739 PHLDA1Q8WV24 401 aaPredicted RBP4.96□□□□□ -1.62
USP38-203ENST00000511739 TMEM74BQ9NUR3 256 aa4.96□□□□□ -1.62
USP38-203ENST00000511739 INTS1Q8N201 2190 aaKnown RBP4.96□□□□□ -1.62
USP38-203ENST00000511739 TMEM250H0YL14 139 aa4.96□□□□□ -1.62
USP38-203ENST00000511739 ZNHIT1O43257 154 aa4.96□□□□□ -1.62
USP38-203ENST00000511739 ALX3O95076 343 aa4.96□□□□□ -1.62
USP38-203ENST00000511739 TSPAN13O95857 204 aa4.96□□□□□ -1.62
USP38-203ENST00000511739 BGLAPP02818 100 aa4.96□□□□□ -1.62
USP38-203ENST00000511739 ASIPP42127 132 aa4.96□□□□□ -1.62
USP38-203ENST00000511739 TMEM30BQ3MIR4 351 aa4.96□□□□□ -1.62
USP38-203ENST00000511739 TMEM177Q53S58 311 aa4.96□□□□□ -1.62
USP38-203ENST00000511739 PPP1R27Q86WC6 154 aa4.96□□□□□ -1.62
USP38-203ENST00000511739 CLRN3Q8NCR9 226 aa4.96□□□□□ -1.62
USP38-203ENST00000511739 OR51G1Q8NGK1 321 aa4.96□□□□□ -1.62
USP38-203ENST00000511739 KLF14Q8TD94 323 aaPredicted RBP4.96□□□□□ -1.62
USP38-203ENST00000511739 ZNF721Q8TF20 911 aa4.96□□□□□ -1.62
USP38-203ENST00000511739 RNF133Q8WVZ7 376 aa4.96□□□□□ -1.62
USP38-203ENST00000511739 IL36RNQ9UBH0 155 aa4.96□□□□□ -1.62
USP38-203ENST00000511739 KCNK7Q9Y2U2 307 aa4.96□□□□□ -1.62
USP38-203ENST00000511739 RTTNQ86VV8 2226 aa4.96□□□□□ -1.62
USP38-203ENST00000511739 TRBV20OR9-2A0A075B6H5 130 aa4.96□□□□□ -1.62
USP38-203ENST00000511739 M0R381 172 aa4.96□□□□□ -1.62
USP38-203ENST00000511739 CD33P20138 364 aa4.96□□□□□ -1.62
USP38-203ENST00000511739 FGF9P31371 208 aaPredicted RBP4.96□□□□□ -1.62
USP38-203ENST00000511739 CDKN1AP38936 164 aa4.96□□□□□ -1.62
USP38-203ENST00000511739 FOXL2P58012 376 aa4.96□□□□□ -1.62
USP38-203ENST00000511739 C17orf47Q8NEP4 570 aa4.96□□□□□ -1.62
USP38-203ENST00000511739 CLDND2Q8NHS1 167 aa4.96□□□□□ -1.62
USP38-203ENST00000511739 SAP25Q8TEE9 199 aa4.96□□□□□ -1.62
USP38-203ENST00000511739 DNAJC4Q9NNZ3 241 aa4.96□□□□□ -1.62
USP38-203ENST00000511739 CYB5R1Q9UHQ9 305 aa4.96□□□□□ -1.62
USP38-203ENST00000511739 FBXL7Q9UJT9 491 aa4.96□□□□□ -1.62
USP38-203ENST00000511739 DOCK4Q8N1I0 1966 aa4.96□□□□□ -1.62
USP38-203ENST00000511739 ELOA3CA0A087WX78 387 aaPredicted RBP4.96□□□□□ -1.62
USP38-203ENST00000511739 IGHV3-11P01762 117 aa4.96□□□□□ -1.62
USP38-203ENST00000511739 MMP9P14780 707 aa4.96□□□□□ -1.62
USP38-203ENST00000511739 LY6DQ14210 128 aa4.96□□□□□ -1.62
USP38-203ENST00000511739 INSL4Q14641 139 aa4.96□□□□□ -1.62
USP38-203ENST00000511739 LBHQ53QV2 105 aaPredicted RBP4.96□□□□□ -1.62
USP38-203ENST00000511739 COLCA1Q6ZS62 124 aa4.96□□□□□ -1.62
USP38-203ENST00000511739 LEAP2Q969E1 77 aa4.96□□□□□ -1.62
USP38-203ENST00000511739 TMEM106BQ9NUM4 274 aa4.96□□□□□ -1.62
USP38-203ENST00000511739 FLRT3Q9NZU0 649 aa4.96□□□□□ -1.62
USP38-203ENST00000511739 FRRS1LQ9P0K9 344 aa4.96□□□□□ -1.62
USP38-203ENST00000511739 C7orf66A4D0T2 115 aa4.95□□□□□ -1.62
USP38-203ENST00000511739 C7orf71A4D174 169 aa4.95□□□□□ -1.62
USP38-203ENST00000511739 CDC42EP2O14613 210 aa4.95□□□□□ -1.62
USP38-203ENST00000511739 EFEMP2O95967 443 aa4.95□□□□□ -1.62
USP38-203ENST00000511739 PQLC2Q6ZP29 291 aa4.95□□□□□ -1.62
USP38-203ENST00000511739 SLC25A28Q96A46 364 aa4.95□□□□□ -1.62
USP38-203ENST00000511739 NRIP2Q9BQI9 281 aa4.95□□□□□ -1.62
USP38-203ENST00000511739 ABCA4P78363 2273 aa4.95□□□□□ -1.62
USP38-203ENST00000511739 LOC101059948A0A1B0GTJ6 334 aa4.95□□□□□ -1.62
USP38-203ENST00000511739 NPIPB4C9JG80 1138 aa4.95□□□□□ -1.62
USP38-203ENST00000511739 AMY1AP04745 511 aa4.95□□□□□ -1.62
USP38-203ENST00000511739 HOXA6P31267 233 aa4.95□□□□□ -1.62
USP38-203ENST00000511739 HSPE1P61604 102 aaKnown RBP4.95□□□□□ -1.62
USP38-203ENST00000511739 TMEM42Q69YG0 159 aa4.95□□□□□ -1.62
USP38-203ENST00000511739 SCMH1Q96GD3 660 aa4.95□□□□□ -1.62
USP38-203ENST00000511739 C11orf68Q9H3H3 251 aaKnown RBP4.95□□□□□ -1.62
USP38-203ENST00000511739 GP6Q9HCN6 339 aa4.95□□□□□ -1.62
USP38-203ENST00000511739 JKAMPQ9P055 326 aa4.95□□□□□ -1.62
USP38-203ENST00000511739 ZNF646O15015 1829 aaPredicted RBP4.95□□□□□ -1.62
USP38-203ENST00000511739 NINQ8N4C6 2090 aa4.95□□□□□ -1.62
USP38-203ENST00000511739 A0A1W2PQF6 199 aa4.95□□□□□ -1.62
USP38-203ENST00000511739 ANKRD20A5PA0PJZ0 165 aa4.95□□□□□ -1.62
USP38-203ENST00000511739 H3BTX0 84 aa4.95□□□□□ -1.62
USP38-203ENST00000511739 MVDP53602 400 aa4.95□□□□□ -1.62
USP38-203ENST00000511739 FAM27E3Q08E93 113 aa4.95□□□□□ -1.62
USP38-203ENST00000511739 TTC32Q5I0X7 151 aa4.95□□□□□ -1.62
USP38-203ENST00000511739 ZNF324BQ6AW86 544 aaPredicted RBP4.95□□□□□ -1.62
USP38-203ENST00000511739 TET1Q8NFU7 2136 aa4.95□□□□□ -1.62
USP38-203ENST00000511739 VN1R17PQ8TDU5 208 aa4.95□□□□□ -1.62
USP38-203ENST00000511739 OR51M1Q9H341 326 aa4.95□□□□□ -1.62
USP38-203ENST00000511739 ZDBF2Q9HCK1 2354 aa4.95□□□□□ -1.62
USP38-203ENST00000511739 LINC00862A6NCI5 91 aa4.95□□□□□ -1.62
USP38-203ENST00000511739 IGKV1D-33P01593 117 aa4.95□□□□□ -1.62
USP38-203ENST00000511739 IGKV1-33P01594 117 aa4.95□□□□□ -1.62
USP38-203ENST00000511739 CD8AP01732 235 aa4.95□□□□□ -1.62
USP38-203ENST00000511739 PRSS53Q2L4Q9 553 aa4.95□□□□□ -1.62
USP38-203ENST00000511739 PEAR1Q5VY43 1037 aaPredicted RBP4.95□□□□□ -1.62
USP38-203ENST00000511739 LEMD1Q68G75 181 aa4.95□□□□□ -1.62
USP38-203ENST00000511739 OR4D5Q8NGN0 318 aa4.95□□□□□ -1.62
USP38-203ENST00000511739 WDFY2Q96P53 400 aa4.95□□□□□ -1.62
USP38-203ENST00000511739 JPT1Q9UK76 154 aa4.95□□□□□ -1.62
USP38-203ENST00000511739 DSPPQ9NZW4 1301 aa4.95□□□□□ -1.62
USP38-203ENST00000511739 NPIPB9F8W1W9 429 aa4.95□□□□□ -1.62
USP38-203ENST00000511739 M0QZK8 103 aa4.95□□□□□ -1.62
USP38-203ENST00000511739 TSPAN2O60636 221 aa4.95□□□□□ -1.62
USP38-203ENST00000511739 NPIPB7O75200 414 aa4.95□□□□□ -1.62
USP38-203ENST00000511739 FABP2P12104 132 aa4.95□□□□□ -1.62
USP38-203ENST00000511739 TIMM23BQ5SRD1 257 aa4.95□□□□□ -1.62
USP38-203ENST00000511739 SAPCD1Q5SSQ6 148 aa4.95□□□□□ -1.62
USP38-203ENST00000511739 CLEC19AQ6UXS0 136 aa4.95□□□□□ -1.62
USP38-203ENST00000511739 ASCL4Q6XD76 172 aa4.95□□□□□ -1.62
USP38-203ENST00000511739 A0A087WX48 190 aa4.94□□□□□ -1.62
USP38-203ENST00000511739 FOXS1O43638 330 aa4.94□□□□□ -1.62
USP38-203ENST00000511739 SAP30O75446 220 aa4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms