RNA–Protein interactions for RNA: ENST00000511676.5

NR1I3-228, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 1,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-228ENST00000511676 RPL30P62888 115 aaKnown RBP7.4□□□□□ -1.22
NR1I3-228ENST00000511676 ID3Q02535 119 aa7.4□□□□□ -1.22
NR1I3-228ENST00000511676 ZNF816Q0VGE8 651 aaPredicted RBP7.4□□□□□ -1.22
NR1I3-228ENST00000511676 PDLIM3Q53GG5 364 aaPredicted RBP7.4□□□□□ -1.22
NR1I3-228ENST00000511676 MINOS1Q5TGZ0 78 aa7.4□□□□□ -1.22
NR1I3-228ENST00000511676 BTNL3Q6UXE8 466 aa7.4□□□□□ -1.22
NR1I3-228ENST00000511676 RBMS3Q6XE24 437 aaKnown RBP7.4□□□□□ -1.22
NR1I3-228ENST00000511676 ACOT7LQ6ZUV0 252 aa7.4□□□□□ -1.22
NR1I3-228ENST00000511676 ZNF546Q86UE3 836 aa7.4□□□□□ -1.22
NR1I3-228ENST00000511676 FOXRED2Q8IWF2 684 aa7.4□□□□□ -1.22
NR1I3-228ENST00000511676 FAM71E2Q8N5Q1 922 aa7.4□□□□□ -1.22
NR1I3-228ENST00000511676 Q8N7P7 452 aa7.4□□□□□ -1.22
NR1I3-228ENST00000511676 C3orf56Q8N813 242 aa7.4□□□□□ -1.22
NR1I3-228ENST00000511676 OR11H4Q8NGC9 324 aa7.4□□□□□ -1.22
NR1I3-228ENST00000511676 WDR89Q96FK6 387 aaPredicted RBP7.4□□□□□ -1.22
NR1I3-228ENST00000511676 MINOS1-NBL1R4GNA1 71 aa7.4□□□□□ -1.22
NR1I3-228ENST00000511676 TRAV20A0A0B4J274 112 aa7.39□□□□□ -1.23
NR1I3-228ENST00000511676 MEX3AA1L020 520 aaKnown RBP7.39□□□□□ -1.23
NR1I3-228ENST00000511676 E5RGE8 158 aa7.39□□□□□ -1.23
NR1I3-228ENST00000511676 BUB1B-PAK6H3BSN5 160 aa7.39□□□□□ -1.23
NR1I3-228ENST00000511676 IGKV1-5P01602 117 aa7.39□□□□□ -1.23
NR1I3-228ENST00000511676 PVALBP20472 110 aaPredicted RBP7.39□□□□□ -1.23
NR1I3-228ENST00000511676 NUP62P37198 522 aaPredicted RBP7.39□□□□□ -1.23
NR1I3-228ENST00000511676 NKX2-1P43699 371 aaPredicted RBP7.39□□□□□ -1.23
NR1I3-228ENST00000511676 GNG10P50151 68 aa7.39□□□□□ -1.23
NR1I3-228ENST00000511676 BRWD1-AS2P59051 145 aa7.39□□□□□ -1.23
NR1I3-228ENST00000511676 RAB32Q13637 225 aa7.39□□□□□ -1.23
NR1I3-228ENST00000511676 KRTAP24-1Q3LI83 254 aa7.39□□□□□ -1.23
NR1I3-228ENST00000511676 TMEM177Q53S58 311 aa7.39□□□□□ -1.23
NR1I3-228ENST00000511676 RPL39P5Q59GN2 51 aa7.39□□□□□ -1.23
NR1I3-228ENST00000511676 GPR157Q5UAW9 335 aa7.39□□□□□ -1.23
NR1I3-228ENST00000511676 FAM53AQ6NSI3 398 aaPredicted RBP7.39□□□□□ -1.23
NR1I3-228ENST00000511676 CCDC144NLQ6NUI1 221 aa7.39□□□□□ -1.23
NR1I3-228ENST00000511676 TGIF2LXQ8IUE1 241 aa7.39□□□□□ -1.23
NR1I3-228ENST00000511676 OR8H3Q8N146 312 aa7.39□□□□□ -1.23
NR1I3-228ENST00000511676 INO80EQ8NBZ0 244 aaPredicted RBP7.39□□□□□ -1.23
NR1I3-228ENST00000511676 RNASE11Q8TAA1 199 aaKnown RBP7.39□□□□□ -1.23
NR1I3-228ENST00000511676 AQP10Q96PS8 301 aa7.39□□□□□ -1.23
NR1I3-228ENST00000511676 RAB40CQ96S21 281 aa7.39□□□□□ -1.23
NR1I3-228ENST00000511676 RNF5Q99942 180 aa7.39□□□□□ -1.23
NR1I3-228ENST00000511676 SIRPDQ9H106 197 aa7.39□□□□□ -1.23
NR1I3-228ENST00000511676 SLA2Q9H6Q3 261 aa7.39□□□□□ -1.23
NR1I3-228ENST00000511676 PRR13Q9NZ81 148 aa7.39□□□□□ -1.23
NR1I3-228ENST00000511676 ONECUT1Q9UBC0 465 aa7.39□□□□□ -1.23
NR1I3-228ENST00000511676 NSG2Q9Y328 171 aa7.39□□□□□ -1.23
NR1I3-228ENST00000511676 TBL2Q9Y4P3 447 aaKnown RBP7.39□□□□□ -1.23
NR1I3-228ENST00000511676 FBN1P35555 2871 aaKnown RBP7.38□□□□□ -1.23
NR1I3-228ENST00000511676 ZANQ9Y493 2812 aa7.38□□□□□ -1.23
NR1I3-228ENST00000511676 FXYD6-FXYD2A0A087WZ82 144 aa7.38□□□□□ -1.23
NR1I3-228ENST00000511676 A0A096LNT2 108 aa7.38□□□□□ -1.23
NR1I3-228ENST00000511676 MPTX1A8MV57 137 aa7.38□□□□□ -1.23
NR1I3-228ENST00000511676 LEUTXA8MZ59 168 aa7.38□□□□□ -1.23
NR1I3-228ENST00000511676 H0YJW9 148 aa7.38□□□□□ -1.23
NR1I3-228ENST00000511676 LY6LH3BQJ8 138 aa7.38□□□□□ -1.23
NR1I3-228ENST00000511676 J3QLI3 93 aa7.38□□□□□ -1.23
NR1I3-228ENST00000511676 L7N2F9 121 aa7.38□□□□□ -1.23
NR1I3-228ENST00000511676 RAMP3O60896 148 aa7.38□□□□□ -1.23
NR1I3-228ENST00000511676 MED6O75586 246 aa7.38□□□□□ -1.23
NR1I3-228ENST00000511676 S1PR2O95136 353 aa7.38□□□□□ -1.23
NR1I3-228ENST00000511676 MBPP02686 304 aaPredicted RBP7.38□□□□□ -1.23
NR1I3-228ENST00000511676 GAPDHP04406 335 aaKnown RBP7.38□□□□□ -1.23
NR1I3-228ENST00000511676 CT45A6P0DMU7 189 aa7.38□□□□□ -1.23
NR1I3-228ENST00000511676 CT45A5P0DMU8 189 aa7.38□□□□□ -1.23
NR1I3-228ENST00000511676 CT45A7P0DMV0 189 aa7.38□□□□□ -1.23
NR1I3-228ENST00000511676 EPHA1P21709 976 aa7.38□□□□□ -1.23
NR1I3-228ENST00000511676 ZFP36P26651 326 aaKnown RBP7.38□□□□□ -1.23
NR1I3-228ENST00000511676 HTR1DP28221 377 aa7.38□□□□□ -1.23
NR1I3-228ENST00000511676 S100A11P31949 105 aa7.38□□□□□ -1.23
NR1I3-228ENST00000511676 P2RY1P47900 373 aa7.38□□□□□ -1.23
NR1I3-228ENST00000511676 LGALS7P47929 136 aa7.38□□□□□ -1.23
NR1I3-228ENST00000511676 UBE2E1P51965 193 aa7.38□□□□□ -1.23
NR1I3-228ENST00000511676 HABP2Q14520 560 aaPredicted RBP7.38□□□□□ -1.23
NR1I3-228ENST00000511676 MIDNQ504T8 468 aa7.38□□□□□ -1.23
NR1I3-228ENST00000511676 Q5BKY6 102 aa7.38□□□□□ -1.23
NR1I3-228ENST00000511676 LAMTOR1Q6IAA8 161 aa7.38□□□□□ -1.23
NR1I3-228ENST00000511676 H2BFWTQ7Z2G1 175 aa7.38□□□□□ -1.23
NR1I3-228ENST00000511676 ZNF429Q86V71 674 aa7.38□□□□□ -1.23
NR1I3-228ENST00000511676 KCNRGQ8N5I3 272 aa7.38□□□□□ -1.23
NR1I3-228ENST00000511676 ZNF383Q8NA42 475 aa7.38□□□□□ -1.23
NR1I3-228ENST00000511676 OR4P4Q8NGL7 312 aa7.38□□□□□ -1.23
NR1I3-228ENST00000511676 OR4C13Q8NGP0 309 aa7.38□□□□□ -1.23
NR1I3-228ENST00000511676 OR52E5Q8NH55 327 aa7.38□□□□□ -1.23
NR1I3-228ENST00000511676 OR4A5Q8NH83 315 aa7.38□□□□□ -1.23
NR1I3-228ENST00000511676 VSTM2AQ8TAG5 236 aa7.38□□□□□ -1.23
NR1I3-228ENST00000511676 LEAP2Q969E1 77 aa7.38□□□□□ -1.23
NR1I3-228ENST00000511676 R3HDM4Q96D70 268 aa7.38□□□□□ -1.23
NR1I3-228ENST00000511676 CIB3Q96Q77 187 aaPredicted RBP7.38□□□□□ -1.23
NR1I3-228ENST00000511676 NABP2Q9BQ15 211 aa7.38□□□□□ -1.23
NR1I3-228ENST00000511676 RNF126Q9BV68 326 aa7.38□□□□□ -1.23
NR1I3-228ENST00000511676 MFFQ9GZY8 342 aa7.38□□□□□ -1.23
NR1I3-228ENST00000511676 LPAR2Q9HBW0 351 aa7.38□□□□□ -1.23
NR1I3-228ENST00000511676 CTNNBIP1Q9NSA3 81 aaPredicted RBP7.38□□□□□ -1.23
NR1I3-228ENST00000511676 SLC35D1Q9NTN3 355 aa7.38□□□□□ -1.23
NR1I3-228ENST00000511676 GSKIPQ9P0R6 139 aa7.38□□□□□ -1.23
NR1I3-228ENST00000511676 DPM3Q9P2X0 92 aa7.38□□□□□ -1.23
NR1I3-228ENST00000511676 MBD2Q9UBB5 411 aa7.38□□□□□ -1.23
NR1I3-228ENST00000511676 HSPB7Q9UBY9 170 aa7.38□□□□□ -1.23
NR1I3-228ENST00000511676 WASHC3Q9Y3C0 194 aa7.38□□□□□ -1.23
NR1I3-228ENST00000511676 HSPB11Q9Y547 144 aa7.38□□□□□ -1.23
NR1I3-228ENST00000511676 IGHV4-61A0A0C4DH41 118 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms