RNA–Protein interactions for RNA: ENST00000510852.1

USP53-207, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 2

Gene USP53, Length 2,437 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-207ENST00000510852 ERMAPQ96PL5 475 aaPredicted RBP7.98□□□□□ -1.13
USP53-207ENST00000510852 OR4F4Q96R69 305 aa7.98□□□□□ -1.13
USP53-207ENST00000510852 OR2J1Q9GZK6 312 aa7.98□□□□□ -1.13
USP53-207ENST00000510852 VSIRQ9H7M9 311 aa7.98□□□□□ -1.13
USP53-207ENST00000510852 ZNF226Q9NYT6 803 aa7.98□□□□□ -1.13
USP53-207ENST00000510852 COMMD3Q9UBI1 195 aa7.98□□□□□ -1.13
USP53-207ENST00000510852 WIPI2Q9Y4P8 454 aa7.98□□□□□ -1.13
USP53-207ENST00000510852 A0A1B0GTH9 108 aa7.98□□□□□ -1.13
USP53-207ENST00000510852 SLC2A10O95528 541 aa7.98□□□□□ -1.13
USP53-207ENST00000510852 GALR1P47211 349 aa7.98□□□□□ -1.13
USP53-207ENST00000510852 LY6DQ14210 128 aa7.98□□□□□ -1.13
USP53-207ENST00000510852 RHEBQ15382 184 aa7.98□□□□□ -1.13
USP53-207ENST00000510852 MESTQ5EB52 335 aa7.98□□□□□ -1.13
USP53-207ENST00000510852 OR4S1Q8NGB4 309 aa7.98□□□□□ -1.13
USP53-207ENST00000510852 OR2G2Q8NGZ5 317 aa7.98□□□□□ -1.13
USP53-207ENST00000510852 ZNF502Q8TBZ5 544 aa7.98□□□□□ -1.13
USP53-207ENST00000510852 GPR146Q96CH1 333 aa7.98□□□□□ -1.13
USP53-207ENST00000510852 SLC35E1Q96K37 410 aa7.98□□□□□ -1.13
USP53-207ENST00000510852 C15orf61A6NNL5 157 aa7.97□□□□□ -1.13
USP53-207ENST00000510852 J3KT08 172 aa7.97□□□□□ -1.13
USP53-207ENST00000510852 AIPO00170 330 aa7.97□□□□□ -1.13
USP53-207ENST00000510852 PLAUP00749 431 aa7.97□□□□□ -1.13
USP53-207ENST00000510852 EMP1P54849 157 aa7.97□□□□□ -1.13
USP53-207ENST00000510852 HSPE1P61604 102 aaKnown RBP7.97□□□□□ -1.13
USP53-207ENST00000510852 IFITM3Q01628 133 aa7.97□□□□□ -1.13
USP53-207ENST00000510852 ZNF154Q13106 437 aa7.97□□□□□ -1.13
USP53-207ENST00000510852 UNC119Q13432 240 aa7.97□□□□□ -1.13
USP53-207ENST00000510852 MORN2Q502X0 79 aa7.97□□□□□ -1.13
USP53-207ENST00000510852 PCSK4Q6UW60 755 aa7.97□□□□□ -1.13
USP53-207ENST00000510852 TCEANCQ8N8B7 351 aa7.97□□□□□ -1.13
USP53-207ENST00000510852 OR2K2Q8NGT1 345 aa7.97□□□□□ -1.13
USP53-207ENST00000510852 RHOXF1Q8NHV9 184 aa7.97□□□□□ -1.13
USP53-207ENST00000510852 PGLYRP3Q96LB9 341 aa7.97□□□□□ -1.13
USP53-207ENST00000510852 Q96M85 177 aa7.97□□□□□ -1.13
USP53-207ENST00000510852 TSPAN32Q96QS1 320 aa7.97□□□□□ -1.13
USP53-207ENST00000510852 GPER1Q99527 375 aa7.97□□□□□ -1.13
USP53-207ENST00000510852 NRIP2Q9BQI9 281 aa7.97□□□□□ -1.13
USP53-207ENST00000510852 DNAJC13O75165 2243 aa7.97□□□□□ -1.13
USP53-207ENST00000510852 A0A0G2JNJ9 132 aa7.97□□□□□ -1.13
USP53-207ENST00000510852 LOC102725191A0A1B0GVB3 256 aa7.97□□□□□ -1.13
USP53-207ENST00000510852 IQCMA0A1B0GVH7 501 aa7.97□□□□□ -1.13
USP53-207ENST00000510852 MSGN1A6NI15 193 aa7.97□□□□□ -1.13
USP53-207ENST00000510852 KNG1P01042 644 aa7.97□□□□□ -1.13
USP53-207ENST00000510852 HBZP02008 142 aa7.97□□□□□ -1.13
USP53-207ENST00000510852 SRIP30626 198 aa7.97□□□□□ -1.13
USP53-207ENST00000510852 ETV6P41212 452 aa7.97□□□□□ -1.13
USP53-207ENST00000510852 POU3F1Q03052 451 aaPredicted RBP7.97□□□□□ -1.13
USP53-207ENST00000510852 FAM27E3Q08E93 113 aa7.97□□□□□ -1.13
USP53-207ENST00000510852 PRR30Q53SZ7 412 aaPredicted RBP7.97□□□□□ -1.13
USP53-207ENST00000510852 OR4K13Q8NH42 304 aa7.97□□□□□ -1.13
USP53-207ENST00000510852 GALNT14Q96FL9 552 aa7.97□□□□□ -1.13
USP53-207ENST00000510852 PRR25Q96S07 402 aa7.97□□□□□ -1.13
USP53-207ENST00000510852 AGMATQ9BSE5 352 aa7.97□□□□□ -1.13
USP53-207ENST00000510852 ADAT1Q9BUB4 502 aaKnown RBP7.97□□□□□ -1.13
USP53-207ENST00000510852 CMC2Q9NRP2 79 aa7.97□□□□□ -1.13
USP53-207ENST00000510852 Q9UFV3 132 aa7.97□□□□□ -1.13
USP53-207ENST00000510852 IGHMP01871 453 aa7.96□□□□□ -1.14
USP53-207ENST00000510852 UBE2E1P51965 193 aa7.96□□□□□ -1.14
USP53-207ENST00000510852 RPL27P61353 136 aaKnown RBP7.96□□□□□ -1.14
USP53-207ENST00000510852 SNRPGP62308 76 aaKnown RBP7.96□□□□□ -1.14
USP53-207ENST00000510852 C1DQ13901 141 aaKnown RBP7.96□□□□□ -1.14
USP53-207ENST00000510852 SLC25A35Q3KQZ1 300 aa7.96□□□□□ -1.14
USP53-207ENST00000510852 TEX36Q5VZQ5 186 aa7.96□□□□□ -1.14
USP53-207ENST00000510852 HOGA1Q86XE5 327 aa7.96□□□□□ -1.14
USP53-207ENST00000510852 OR52E2Q8NGJ4 325 aa7.96□□□□□ -1.14
USP53-207ENST00000510852 VN1R17PQ8TDU5 208 aa7.96□□□□□ -1.14
USP53-207ENST00000510852 TMEM101Q96IK0 257 aa7.96□□□□□ -1.14
USP53-207ENST00000510852 UBE2E2Q96LR5 201 aa7.96□□□□□ -1.14
USP53-207ENST00000510852 PDCD1LG2Q9BQ51 273 aa7.96□□□□□ -1.14
USP53-207ENST00000510852 ZNF319Q9P2F9 582 aa7.96□□□□□ -1.14
USP53-207ENST00000510852 MCTS1Q9ULC4 181 aaKnown RBP7.96□□□□□ -1.14
USP53-207ENST00000510852 OR51B2Q9Y5P1 312 aa7.96□□□□□ -1.14
USP53-207ENST00000510852 USP24Q9UPU5 2620 aa7.96□□□□□ -1.14
USP53-207ENST00000510852 RIIAD1A6NNX1 92 aa7.95□□□□□ -1.14
USP53-207ENST00000510852 FABP7O15540 132 aa7.95□□□□□ -1.14
USP53-207ENST00000510852 TRAF3IP2O43734 574 aaPredicted RBP7.95□□□□□ -1.14
USP53-207ENST00000510852 CD2P06729 351 aa7.95□□□□□ -1.14
USP53-207ENST00000510852 ATRXP46100 2492 aa7.95□□□□□ -1.14
USP53-207ENST00000510852 NCS1P62166 190 aa7.95□□□□□ -1.14
USP53-207ENST00000510852 MEF2CQ06413 473 aaPredicted RBP7.95□□□□□ -1.14
USP53-207ENST00000510852 ZNF266Q14584 549 aa7.95□□□□□ -1.14
USP53-207ENST00000510852 LAIR2Q6ISS4 152 aa7.95□□□□□ -1.14
USP53-207ENST00000510852 LEG1Q6P5S2 330 aa7.95□□□□□ -1.14
USP53-207ENST00000510852 BCDIN3DQ7Z5W3 292 aaKnown RBP7.95□□□□□ -1.14
USP53-207ENST00000510852 SPICQ8N5J4 248 aa7.95□□□□□ -1.14
USP53-207ENST00000510852 ZNF519Q8TB69 540 aa7.95□□□□□ -1.14
USP53-207ENST00000510852 THEM6Q8WUY1 208 aa7.95□□□□□ -1.14
USP53-207ENST00000510852 SECTM1Q8WVN6 248 aa7.95□□□□□ -1.14
USP53-207ENST00000510852 TMED6Q8WW62 240 aa7.95□□□□□ -1.14
USP53-207ENST00000510852 C1QTNF4Q9BXJ3 329 aa7.95□□□□□ -1.14
USP53-207ENST00000510852 ELL3Q9HB65 397 aaPredicted RBP7.95□□□□□ -1.14
USP53-207ENST00000510852 KCNJ16Q9NPI9 418 aa7.95□□□□□ -1.14
USP53-207ENST00000510852 AKIP1Q9NQ31 210 aa7.95□□□□□ -1.14
USP53-207ENST00000510852 UQCC1Q9NVA1 299 aa7.95□□□□□ -1.14
USP53-207ENST00000510852 ASF1BQ9NVP2 202 aa7.95□□□□□ -1.14
USP53-207ENST00000510852 FAM30AQ9NZY2 134 aa7.95□□□□□ -1.14
USP53-207ENST00000510852 NAT8BQ9UHF3 227 aa7.95□□□□□ -1.14
USP53-207ENST00000510852 SPTA1P02549 2419 aa7.95□□□□□ -1.14
USP53-207ENST00000510852 BORCS7-ASMTA0A0B4J1R7 106 aa7.95□□□□□ -1.14
USP53-207ENST00000510852 FAM236DA0A1B0GTK5 79 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms