RNA–Protein interactions for RNA: ENST00000509490.5

PDGFRA-208, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 1 (best)

Gene PDGFRA, Length 2,991 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-208ENST00000509490 C3AR1Q16581 482 aa7.66□□□□□ -1.18
PDGFRA-208ENST00000509490 RNFT1Q5M7Z0 435 aa7.66□□□□□ -1.18
PDGFRA-208ENST00000509490 IGFL2Q6UWQ7 119 aa7.66□□□□□ -1.18
PDGFRA-208ENST00000509490 TREML4Q6UXN2 200 aa7.66□□□□□ -1.18
PDGFRA-208ENST00000509490 KIR2DL5AQ8N109 375 aa7.66□□□□□ -1.18
PDGFRA-208ENST00000509490 PNKDQ8N490 385 aa7.66□□□□□ -1.18
PDGFRA-208ENST00000509490 OR13A1Q8NGR1 328 aa7.66□□□□□ -1.18
PDGFRA-208ENST00000509490 LINC00574Q9H8X3 128 aa7.66□□□□□ -1.18
PDGFRA-208ENST00000509490 SLC25A10Q9UBX3 287 aaPredicted RBP7.66□□□□□ -1.18
PDGFRA-208ENST00000509490 SRRM5B3KS81 715 aa7.65□□□□□ -1.18
PDGFRA-208ENST00000509490 J3KRW8 73 aa7.65□□□□□ -1.18
PDGFRA-208ENST00000509490 CD59P13987 128 aa7.65□□□□□ -1.18
PDGFRA-208ENST00000509490 RELBQ01201 579 aa7.65□□□□□ -1.18
PDGFRA-208ENST00000509490 PDZD11Q5EBL8 140 aa7.65□□□□□ -1.18
PDGFRA-208ENST00000509490 LINC00696Q6ZRV3 163 aa7.65□□□□□ -1.18
PDGFRA-208ENST00000509490 SSX9Q7RTT3 188 aa7.65□□□□□ -1.18
PDGFRA-208ENST00000509490 GGTLC1Q9BX51 225 aa7.65□□□□□ -1.18
PDGFRA-208ENST00000509490 QTRT1Q9BXR0 403 aaKnown RBP7.65□□□□□ -1.18
PDGFRA-208ENST00000509490 RAB9BQ9NP90 201 aa7.65□□□□□ -1.18
PDGFRA-208ENST00000509490 TRBV9A0A0B4J1U6 114 aa7.65□□□□□ -1.18
PDGFRA-208ENST00000509490 B9A039 149 aa7.65□□□□□ -1.18
PDGFRA-208ENST00000509490 AQP7O14520 342 aa7.65□□□□□ -1.18
PDGFRA-208ENST00000509490 PDGFBP01127 241 aaPredicted RBP7.65□□□□□ -1.18
PDGFRA-208ENST00000509490 RPL29P47914 159 aaKnown RBP7.65□□□□□ -1.18
PDGFRA-208ENST00000509490 IDH3GP51553 393 aaPredicted RBP7.65□□□□□ -1.18
PDGFRA-208ENST00000509490 LOXL3P58215 753 aa7.65□□□□□ -1.18
PDGFRA-208ENST00000509490 TLE1Q04724 770 aa7.65□□□□□ -1.18
PDGFRA-208ENST00000509490 MORN2Q502X0 79 aa7.65□□□□□ -1.18
PDGFRA-208ENST00000509490 C1orf159Q96HA4 380 aa7.65□□□□□ -1.18
PDGFRA-208ENST00000509490 SFRP2Q96HF1 295 aa7.65□□□□□ -1.18
PDGFRA-208ENST00000509490 MGST2Q99735 147 aa7.65□□□□□ -1.18
PDGFRA-208ENST00000509490 ZNF407Q9C0G0 2248 aa7.65□□□□□ -1.18
PDGFRA-208ENST00000509490 DKK4Q9UBT3 224 aa7.65□□□□□ -1.18
PDGFRA-208ENST00000509490 FOXA2Q9Y261 457 aaPredicted RBP7.65□□□□□ -1.18
PDGFRA-208ENST00000509490 KIAA2026Q5HYC2 2103 aa7.65□□□□□ -1.19
PDGFRA-208ENST00000509490 TRGV10A0A0A0MS01 117 aa7.65□□□□□ -1.19
PDGFRA-208ENST00000509490 A0A1W2PPQ1 181 aa7.65□□□□□ -1.19
PDGFRA-208ENST00000509490 MGST3O14880 152 aa7.65□□□□□ -1.19
PDGFRA-208ENST00000509490 GRPP07492 148 aa7.65□□□□□ -1.19
PDGFRA-208ENST00000509490 CEBPDP49716 269 aaPredicted RBP7.65□□□□□ -1.19
PDGFRA-208ENST00000509490 C1orf194Q5T5A4 169 aa7.65□□□□□ -1.19
PDGFRA-208ENST00000509490 BTNL3Q6UXE8 466 aa7.65□□□□□ -1.19
PDGFRA-208ENST00000509490 CD177Q8N6Q3 437 aa7.65□□□□□ -1.19
PDGFRA-208ENST00000509490 Q8TCH9 128 aa7.65□□□□□ -1.19
PDGFRA-208ENST00000509490 MRGPRDQ8TDS7 321 aa7.65□□□□□ -1.19
PDGFRA-208ENST00000509490 RBM14Q96PK6 669 aaKnown RBP7.65□□□□□ -1.19
PDGFRA-208ENST00000509490 FUT9Q9Y231 359 aa7.65□□□□□ -1.19
PDGFRA-208ENST00000509490 WNT9BO14905 357 aa7.64□□□□□ -1.19
PDGFRA-208ENST00000509490 TIMP3P35625 211 aa7.64□□□□□ -1.19
PDGFRA-208ENST00000509490 RTP5Q14D33 572 aa7.64□□□□□ -1.19
PDGFRA-208ENST00000509490 ZNF808Q8N4W9 903 aaPredicted RBP7.64□□□□□ -1.19
PDGFRA-208ENST00000509490 PPP1R35Q8TAP8 253 aa7.64□□□□□ -1.19
PDGFRA-208ENST00000509490 RHOVQ96L33 236 aa7.64□□□□□ -1.19
PDGFRA-208ENST00000509490 CDX2Q99626 313 aaPredicted RBP7.64□□□□□ -1.19
PDGFRA-208ENST00000509490 OPN3Q9H1Y3 402 aaPredicted RBP7.64□□□□□ -1.19
PDGFRA-208ENST00000509490 IFI27L2Q9H2X8 130 aa7.64□□□□□ -1.19
PDGFRA-208ENST00000509490 PLSCR4Q9NRQ2 329 aa7.64□□□□□ -1.19
PDGFRA-208ENST00000509490 GABRA2P47869 451 aa7.64□□□□□ -1.19
PDGFRA-208ENST00000509490 RAB7AP51149 207 aa7.64□□□□□ -1.19
PDGFRA-208ENST00000509490 PAFAH1B2P68402 229 aa7.64□□□□□ -1.19
PDGFRA-208ENST00000509490 PRR20EP86478 221 aa7.64□□□□□ -1.19
PDGFRA-208ENST00000509490 PRR20CP86479 221 aa7.64□□□□□ -1.19
PDGFRA-208ENST00000509490 PRR20DP86480 221 aa7.64□□□□□ -1.19
PDGFRA-208ENST00000509490 PRR20BP86481 221 aa7.64□□□□□ -1.19
PDGFRA-208ENST00000509490 PRR20AP86496 221 aa7.64□□□□□ -1.19
PDGFRA-208ENST00000509490 Q3ZCU0 254 aa7.64□□□□□ -1.19
PDGFRA-208ENST00000509490 TEX38Q6PEX7 206 aa7.64□□□□□ -1.19
PDGFRA-208ENST00000509490 GCSAMQ8N6F7 178 aa7.64□□□□□ -1.19
PDGFRA-208ENST00000509490 OR51B6Q9H340 312 aa7.64□□□□□ -1.19
PDGFRA-208ENST00000509490 NPVFQ9HCQ7 196 aa7.64□□□□□ -1.19
PDGFRA-208ENST00000509490 TMEM14BQ9NUH8 114 aa7.64□□□□□ -1.19
PDGFRA-208ENST00000509490 TRBV20OR9-2A0A075B6H5 130 aa7.63□□□□□ -1.19
PDGFRA-208ENST00000509490 C15orf61A6NNL5 157 aa7.63□□□□□ -1.19
PDGFRA-208ENST00000509490 LHBP01229 141 aa7.63□□□□□ -1.19
PDGFRA-208ENST00000509490 PRDX2P32119 198 aa7.63□□□□□ -1.19
PDGFRA-208ENST00000509490 SSTR5P35346 364 aa7.63□□□□□ -1.19
PDGFRA-208ENST00000509490 GPR12P47775 334 aa7.63□□□□□ -1.19
PDGFRA-208ENST00000509490 ATP5G3P48201 142 aa7.63□□□□□ -1.19
PDGFRA-208ENST00000509490 Q0VG73 95 aa7.63□□□□□ -1.19
PDGFRA-208ENST00000509490 COX19Q49B96 90 aa7.63□□□□□ -1.19
PDGFRA-208ENST00000509490 UNQ6494/PRO21346Q6UXR6 183 aa7.63□□□□□ -1.19
PDGFRA-208ENST00000509490 UBALD1Q8TB05 177 aa7.63□□□□□ -1.19
PDGFRA-208ENST00000509490 FAM222BQ8WU58 562 aa7.63□□□□□ -1.19
PDGFRA-208ENST00000509490 CORO2AQ92828 525 aa7.63□□□□□ -1.19
PDGFRA-208ENST00000509490 MEGF10Q96KG7 1140 aa7.63□□□□□ -1.19
PDGFRA-208ENST00000509490 IL36BQ9NZH7 164 aa7.63□□□□□ -1.19
PDGFRA-208ENST00000509490 IL17BQ9UHF5 180 aa7.63□□□□□ -1.19
PDGFRA-208ENST00000509490 A0A1W2PPV4 95 aa7.63□□□□□ -1.19
PDGFRA-208ENST00000509490 ST8SIA5O15466 376 aa7.63□□□□□ -1.19
PDGFRA-208ENST00000509490 RD3LP0DJH9 198 aa7.63□□□□□ -1.19
PDGFRA-208ENST00000509490 KIR2DL2P43627 348 aaPredicted RBP7.63□□□□□ -1.19
PDGFRA-208ENST00000509490 FAM78BQ5VT40 261 aa7.63□□□□□ -1.19
PDGFRA-208ENST00000509490 NEUROG1Q92886 237 aa7.63□□□□□ -1.19
PDGFRA-208ENST00000509490 ADTRPQ96IZ2 230 aa7.63□□□□□ -1.19
PDGFRA-208ENST00000509490 C19orf24Q9BVV8 132 aa7.63□□□□□ -1.19
PDGFRA-208ENST00000509490 DEFB127Q9H1M4 99 aa7.63□□□□□ -1.19
PDGFRA-208ENST00000509490 PSG11Q9UQ72 335 aa7.63□□□□□ -1.19
PDGFRA-208ENST00000509490 ZNF257Q9Y2Q1 563 aa7.63□□□□□ -1.19
PDGFRA-208ENST00000509490 USP34Q70CQ2 3546 aa7.63□□□□□ -1.19
PDGFRA-208ENST00000509490 INS-IGF2F8WCM5 200 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms