RNA–Protein interactions for RNA: ENST00000508474.5

UBE2D3-224, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2

Gene UBE2D3, Length 4,819 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-224ENST00000508474 NRTNQ99748 197 aa6.26□□□□□ -1.41
UBE2D3-224ENST00000508474 MRPS16Q9Y3D3 137 aaKnown RBP6.26□□□□□ -1.41
UBE2D3-224ENST00000508474 SLX4Q8IY92 1834 aa6.26□□□□□ -1.41
UBE2D3-224ENST00000508474 IGHV1OR21-1A0A087WYE8 117 aa6.26□□□□□ -1.41
UBE2D3-224ENST00000508474 PPIAL4DF5H284 164 aa6.26□□□□□ -1.41
UBE2D3-224ENST00000508474 IL6RP08887 468 aaPredicted RBP6.26□□□□□ -1.41
UBE2D3-224ENST00000508474 EGR1P18146 543 aa6.26□□□□□ -1.41
UBE2D3-224ENST00000508474 SMAGPQ0VAQ4 97 aa6.26□□□□□ -1.41
UBE2D3-224ENST00000508474 OR51G1Q8NGK1 321 aa6.26□□□□□ -1.41
UBE2D3-224ENST00000508474 BTAF1O14981 1849 aa6.26□□□□□ -1.41
UBE2D3-224ENST00000508474 SCO2A0A1W2PP80 73 aa6.26□□□□□ -1.41
UBE2D3-224ENST00000508474 FOXS1O43638 330 aa6.26□□□□□ -1.41
UBE2D3-224ENST00000508474 APOHP02749 345 aaPredicted RBP6.26□□□□□ -1.41
UBE2D3-224ENST00000508474 IL9P15248 144 aa6.26□□□□□ -1.41
UBE2D3-224ENST00000508474 TNFAIP6P98066 277 aaPredicted RBP6.26□□□□□ -1.41
UBE2D3-224ENST00000508474 ZNF146Q15072 292 aa6.26□□□□□ -1.41
UBE2D3-224ENST00000508474 SSBP3Q9BWW4 388 aaPredicted RBP6.26□□□□□ -1.41
UBE2D3-224ENST00000508474 DLL3Q9NYJ7 618 aa6.26□□□□□ -1.41
UBE2D3-224ENST00000508474 PILRAQ9UKJ1 303 aa6.26□□□□□ -1.41
UBE2D3-224ENST00000508474 MGST3O14880 152 aa6.25□□□□□ -1.41
UBE2D3-224ENST00000508474 ATXN7O15265 892 aaPredicted RBP6.25□□□□□ -1.41
UBE2D3-224ENST00000508474 TNFSF15O95150 251 aa6.25□□□□□ -1.41
UBE2D3-224ENST00000508474 OR2H2O95918 312 aa6.25□□□□□ -1.41
UBE2D3-224ENST00000508474 IGHV2-5P01817 119 aa6.25□□□□□ -1.41
UBE2D3-224ENST00000508474 MGPP08493 103 aa6.25□□□□□ -1.41
UBE2D3-224ENST00000508474 ATP5G3P48201 142 aa6.25□□□□□ -1.41
UBE2D3-224ENST00000508474 RND2P52198 227 aa6.25□□□□□ -1.41
UBE2D3-224ENST00000508474 PSG4Q00888 419 aa6.25□□□□□ -1.41
UBE2D3-224ENST00000508474 ACSF3Q4G176 576 aaPredicted RBP6.25□□□□□ -1.41
UBE2D3-224ENST00000508474 LINC00114Q6XXX2 140 aa6.25□□□□□ -1.41
UBE2D3-224ENST00000508474 WFDC1Q9HC57 220 aa6.25□□□□□ -1.41
UBE2D3-224ENST00000508474 SEMA5BQ9P283 1151 aa6.25□□□□□ -1.41
UBE2D3-224ENST00000508474 TMEM229AB2RXF0 380 aa6.25□□□□□ -1.41
UBE2D3-224ENST00000508474 ITGBL1O95965 494 aaPredicted RBP6.25□□□□□ -1.41
UBE2D3-224ENST00000508474 MT-CO3P00414 261 aa6.25□□□□□ -1.41
UBE2D3-224ENST00000508474 SMIM10L1P0DMW3 83 aa6.25□□□□□ -1.41
UBE2D3-224ENST00000508474 PSG9Q00887 426 aa6.25□□□□□ -1.41
UBE2D3-224ENST00000508474 TMEM30BQ3MIR4 351 aa6.25□□□□□ -1.41
UBE2D3-224ENST00000508474 OR10W1Q8NGF6 305 aa6.25□□□□□ -1.41
UBE2D3-224ENST00000508474 SMIM10Q96HG1 83 aa6.25□□□□□ -1.41
UBE2D3-224ENST00000508474 NEU1Q99519 415 aa6.25□□□□□ -1.41
UBE2D3-224ENST00000508474 AICDAQ9GZX7 198 aa6.25□□□□□ -1.41
UBE2D3-224ENST00000508474 TCF19Q9Y242 345 aa6.25□□□□□ -1.41
UBE2D3-224ENST00000508474 COX11Q9Y6N1 276 aa6.25□□□□□ -1.41
UBE2D3-224ENST00000508474 RASL11AQ6T310 242 aa6.25□□□□□ -1.41
UBE2D3-224ENST00000508474 SFTPA2Q8IWL1 248 aa6.25□□□□□ -1.41
UBE2D3-224ENST00000508474 SFTPA1Q8IWL2 248 aa6.25□□□□□ -1.41
UBE2D3-224ENST00000508474 RPP21Q9H633 154 aaKnown RBP6.25□□□□□ -1.41
UBE2D3-224ENST00000508474 SHISA7A6NL88 538 aa6.25□□□□□ -1.41
UBE2D3-224ENST00000508474 POU2F2P09086 479 aa6.25□□□□□ -1.41
UBE2D3-224ENST00000508474 LIFP15018 202 aa6.25□□□□□ -1.41
UBE2D3-224ENST00000508474 FOXA3P55318 350 aaPredicted RBP6.25□□□□□ -1.41
UBE2D3-224ENST00000508474 ID3Q02535 119 aa6.25□□□□□ -1.41
UBE2D3-224ENST00000508474 C2orf83Q53S99 150 aa6.25□□□□□ -1.41
UBE2D3-224ENST00000508474 PTCRAQ6ISU1 281 aaPredicted RBP6.25□□□□□ -1.41
UBE2D3-224ENST00000508474 C16orf47Q6ZP98 133 aaPredicted RBP6.25□□□□□ -1.41
UBE2D3-224ENST00000508474 PRELID3AQ96N28 172 aa6.25□□□□□ -1.41
UBE2D3-224ENST00000508474 ZNF714Q96N38 554 aa6.25□□□□□ -1.41
UBE2D3-224ENST00000508474 GFI1Q99684 422 aa6.25□□□□□ -1.41
UBE2D3-224ENST00000508474 SLC25A2Q9BXI2 301 aa6.25□□□□□ -1.41
UBE2D3-224ENST00000508474 PRDM14Q9GZV8 571 aa6.25□□□□□ -1.41
UBE2D3-224ENST00000508474 H7C2G1 150 aa6.24□□□□□ -1.41
UBE2D3-224ENST00000508474 COX5BP10606 129 aa6.24□□□□□ -1.41
UBE2D3-224ENST00000508474 CTSSP25774 331 aa6.24□□□□□ -1.41
UBE2D3-224ENST00000508474 ALKBH6Q3KRA9 238 aa6.24□□□□□ -1.41
UBE2D3-224ENST00000508474 TPTE2P1Q5T6R2 138 aa6.24□□□□□ -1.41
UBE2D3-224ENST00000508474 UNQ5815/PRO19632Q6UWF5 114 aa6.24□□□□□ -1.41
UBE2D3-224ENST00000508474 ASCL5Q7RTU5 278 aa6.24□□□□□ -1.41
UBE2D3-224ENST00000508474 ATP5L2Q7Z4Y8 100 aa6.24□□□□□ -1.41
UBE2D3-224ENST00000508474 DRAM1Q8N682 238 aa6.24□□□□□ -1.41
UBE2D3-224ENST00000508474 ZNF418Q8TF45 676 aaPredicted RBP6.24□□□□□ -1.41
UBE2D3-224ENST00000508474 ZNF385AQ96PM9 386 aaKnown RBP6.24□□□□□ -1.41
UBE2D3-224ENST00000508474 SNHG12Q9BXW3 62 aa6.24□□□□□ -1.41
UBE2D3-224ENST00000508474 RNF7Q9UBF6 113 aa6.24□□□□□ -1.41
UBE2D3-224ENST00000508474 SLC25A10Q9UBX3 287 aaPredicted RBP6.24□□□□□ -1.41
UBE2D3-224ENST00000508474 PRRC2BQ5JSZ5 2229 aaKnown RBP6.24□□□□□ -1.41
UBE2D3-224ENST00000508474 A0A1B0GUT8 65 aa6.24□□□□□ -1.41
UBE2D3-224ENST00000508474 CD5LO43866 347 aa6.24□□□□□ -1.41
UBE2D3-224ENST00000508474 IL11P20809 199 aa6.24□□□□□ -1.41
UBE2D3-224ENST00000508474 CCL11P51671 97 aa6.24□□□□□ -1.41
UBE2D3-224ENST00000508474 PAX2Q02962 417 aa6.24□□□□□ -1.41
UBE2D3-224ENST00000508474 LINC01559Q495D7 138 aa6.24□□□□□ -1.41
UBE2D3-224ENST00000508474 SAMD5Q5TGI4 173 aa6.24□□□□□ -1.41
UBE2D3-224ENST00000508474 TEX38Q6PEX7 206 aa6.24□□□□□ -1.41
UBE2D3-224ENST00000508474 INO80CQ6PI98 192 aaPredicted RBP6.24□□□□□ -1.41
UBE2D3-224ENST00000508474 RBPMS2Q6ZRY4 209 aaKnown RBP6.24□□□□□ -1.41
UBE2D3-224ENST00000508474 TMEM186Q96B77 213 aa6.24□□□□□ -1.41
UBE2D3-224ENST00000508474 FMC1Q96HJ9 113 aa6.24□□□□□ -1.41
UBE2D3-224ENST00000508474 ZNF488Q96MN9 340 aa6.24□□□□□ -1.41
UBE2D3-224ENST00000508474 JPT1Q9UK76 154 aa6.24□□□□□ -1.41
UBE2D3-224ENST00000508474 APOMO95445 188 aa6.24□□□□□ -1.41
UBE2D3-224ENST00000508474 C1QTNF9P0C862 333 aa6.24□□□□□ -1.41
UBE2D3-224ENST00000508474 C10orf128Q5T292 105 aa6.24□□□□□ -1.41
UBE2D3-224ENST00000508474 ZFAND6Q6FIF0 208 aa6.24□□□□□ -1.41
UBE2D3-224ENST00000508474 EAF1Q96JC9 268 aaPredicted RBP6.24□□□□□ -1.41
UBE2D3-224ENST00000508474 TNFRSF19Q9NS68 423 aa6.24□□□□□ -1.41
UBE2D3-224ENST00000508474 PEX7O00628 323 aa6.24□□□□□ -1.41
UBE2D3-224ENST00000508474 TYMSP04818 313 aa6.24□□□□□ -1.41
UBE2D3-224ENST00000508474 PRDX2P32119 198 aa6.24□□□□□ -1.41
UBE2D3-224ENST00000508474 MC5RP33032 325 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms