RNA–Protein interactions for RNA: ENST00000508342.5

NEDD4-208, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 7,235 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-208ENST00000508342 MPV17P39210 176 aa2.51□□□□□ -2.01
NEDD4-208ENST00000508342 CMC4P56277 68 aaPredicted RBP2.51□□□□□ -2.01
NEDD4-208ENST00000508342 KIAA0141Q14154 515 aaPredicted RBP2.51□□□□□ -2.01
NEDD4-208ENST00000508342 KISS1Q15726 138 aa2.51□□□□□ -2.01
NEDD4-208ENST00000508342 ZNF385CQ66K41 422 aaPredicted RBP2.51□□□□□ -2.01
NEDD4-208ENST00000508342 RUSC1-AS1Q66K80 236 aa2.51□□□□□ -2.01
NEDD4-208ENST00000508342 RFPL4BQ6ZWI9 263 aa2.51□□□□□ -2.01
NEDD4-208ENST00000508342 NR2C2APQ86WQ0 139 aa2.51□□□□□ -2.01
NEDD4-208ENST00000508342 RBM45Q8IUH3 476 aaKnown RBP2.51□□□□□ -2.01
NEDD4-208ENST00000508342 OR10A7Q8NGE5 316 aa2.51□□□□□ -2.01
NEDD4-208ENST00000508342 RTN4IP1Q8WWV3 396 aaPredicted RBP2.51□□□□□ -2.01
NEDD4-208ENST00000508342 SLC25A46Q96AG3 418 aa2.51□□□□□ -2.01
NEDD4-208ENST00000508342 MAP6Q96JE9 813 aa2.51□□□□□ -2.01
NEDD4-208ENST00000508342 FANCD2OSQ96PS1 177 aa2.51□□□□□ -2.01
NEDD4-208ENST00000508342 LINC00470Q9BZP3 86 aa2.51□□□□□ -2.01
NEDD4-208ENST00000508342 SEMA5BQ9P283 1151 aa2.51□□□□□ -2.01
NEDD4-208ENST00000508342 METTL1Q9UBP6 276 aaKnown RBP2.51□□□□□ -2.01
NEDD4-208ENST00000508342 DIMT1Q9UNQ2 313 aaKnown RBP2.51□□□□□ -2.01
NEDD4-208ENST00000508342 CHD3Q12873 2000 aaKnown RBP2.51□□□□□ -2.01
NEDD4-208ENST00000508342 CGB1A6NKQ9 187 aa2.5□□□□□ -2.01
NEDD4-208ENST00000508342 M0R3E3 92 aa2.5□□□□□ -2.01
NEDD4-208ENST00000508342 PPP1R17O96001 155 aa2.5□□□□□ -2.01
NEDD4-208ENST00000508342 IGHMP01871 453 aa2.5□□□□□ -2.01
NEDD4-208ENST00000508342 PGA4P0DJD7 388 aa2.5□□□□□ -2.01
NEDD4-208ENST00000508342 PGA3P0DJD8 388 aa2.5□□□□□ -2.01
NEDD4-208ENST00000508342 NQO2P16083 231 aa2.5□□□□□ -2.01
NEDD4-208ENST00000508342 CEACAM8P31997 349 aaPredicted RBP2.5□□□□□ -2.01
NEDD4-208ENST00000508342 LPAR6P43657 344 aa2.5□□□□□ -2.01
NEDD4-208ENST00000508342 PSMB2P49721 201 aa2.5□□□□□ -2.01
NEDD4-208ENST00000508342 COMPP49747 757 aaPredicted RBP2.5□□□□□ -2.01
NEDD4-208ENST00000508342 ERVK11-1P61568 191 aa2.5□□□□□ -2.01
NEDD4-208ENST00000508342 DAZAP2Q15038 168 aaPredicted RBP2.5□□□□□ -2.01
NEDD4-208ENST00000508342 IGFL2Q6UWQ7 119 aa2.5□□□□□ -2.01
NEDD4-208ENST00000508342 SPNS2Q8IVW8 549 aa2.5□□□□□ -2.01
NEDD4-208ENST00000508342 ZNF383Q8NA42 475 aa2.5□□□□□ -2.01
NEDD4-208ENST00000508342 LFNGQ8NES3 379 aa2.5□□□□□ -2.01
NEDD4-208ENST00000508342 C5orf30Q96GV9 206 aa2.5□□□□□ -2.01
NEDD4-208ENST00000508342 TMEM101Q96IK0 257 aa2.5□□□□□ -2.01
NEDD4-208ENST00000508342 RNF2Q99496 336 aa2.5□□□□□ -2.01
NEDD4-208ENST00000508342 TAF9BQ9HBM6 251 aa2.5□□□□□ -2.01
NEDD4-208ENST00000508342 UQCC1Q9NVA1 299 aa2.5□□□□□ -2.01
NEDD4-208ENST00000508342 RCL1Q9Y2P8 373 aaKnown RBP2.5□□□□□ -2.01
NEDD4-208ENST00000508342 ARL2-SNX15V9GYD0 113 aa2.5□□□□□ -2.01
NEDD4-208ENST00000508342 EML6Q6ZMW3 1958 aa2.5□□□□□ -2.01
NEDD4-208ENST00000508342 ZC3H12DA2A288 527 aaKnown RBP2.5□□□□□ -2.01
NEDD4-208ENST00000508342 CORTO00230 105 aa2.5□□□□□ -2.01
NEDD4-208ENST00000508342 CDK2AP2O75956 126 aa2.5□□□□□ -2.01
NEDD4-208ENST00000508342 BGLAPP02818 100 aa2.5□□□□□ -2.01
NEDD4-208ENST00000508342 PRSS1P07477 247 aa2.5□□□□□ -2.01
NEDD4-208ENST00000508342 HNRNPA3P51991 378 aaKnown RBP2.5□□□□□ -2.01
NEDD4-208ENST00000508342 TMEM33P57088 247 aa2.5□□□□□ -2.01
NEDD4-208ENST00000508342 PJVKQ0ZLH3 352 aa2.5□□□□□ -2.01
NEDD4-208ENST00000508342 PSG5Q15238 335 aa2.5□□□□□ -2.01
NEDD4-208ENST00000508342 IQCJQ1A5X6 159 aa2.5□□□□□ -2.01
NEDD4-208ENST00000508342 FAM53AQ6NSI3 398 aaPredicted RBP2.5□□□□□ -2.01
NEDD4-208ENST00000508342 SCGB1D4Q6XE38 83 aa2.5□□□□□ -2.01
NEDD4-208ENST00000508342 OR51S1Q8NGJ8 323 aa2.5□□□□□ -2.01
NEDD4-208ENST00000508342 YIPF6Q96EC8 236 aa2.5□□□□□ -2.01
NEDD4-208ENST00000508342 CLEC7AQ9BXN2 247 aa2.5□□□□□ -2.01
NEDD4-208ENST00000508342 ING1Q9UK53 422 aaPredicted RBP2.5□□□□□ -2.01
NEDD4-208ENST00000508342 PHLDA3Q9Y5J5 127 aa2.5□□□□□ -2.01
NEDD4-208ENST00000508342 IGHV4-30-2A0A087WSY4 118 aa2.5□□□□□ -2.01
NEDD4-208ENST00000508342 TMEM235A6NFC5 223 aa2.5□□□□□ -2.01
NEDD4-208ENST00000508342 ZNF727A8MUV8 499 aa2.5□□□□□ -2.01
NEDD4-208ENST00000508342 ISLRO14498 428 aa2.5□□□□□ -2.01
NEDD4-208ENST00000508342 ZNF207O43670 478 aaKnown RBP2.5□□□□□ -2.01
NEDD4-208ENST00000508342 OR5AC1P0C628 307 aa2.5□□□□□ -2.01
NEDD4-208ENST00000508342 PSMB1P20618 241 aaKnown RBP2.5□□□□□ -2.01
NEDD4-208ENST00000508342 COL8A2P25067 703 aa2.5□□□□□ -2.01
NEDD4-208ENST00000508342 GLRXP35754 106 aa2.5□□□□□ -2.01
NEDD4-208ENST00000508342 RPS19P39019 145 aaKnown RBP2.5□□□□□ -2.01
NEDD4-208ENST00000508342 PRSS8Q16651 343 aa2.5□□□□□ -2.01
NEDD4-208ENST00000508342 C16orf82Q7Z2V1 217 aa2.5□□□□□ -2.01
NEDD4-208ENST00000508342 LRRTM1Q86UE6 522 aa2.5□□□□□ -2.01
NEDD4-208ENST00000508342 OR5A2Q8NGI9 324 aa2.5□□□□□ -2.01
NEDD4-208ENST00000508342 SSMEM1Q8WWF3 244 aa2.5□□□□□ -2.01
NEDD4-208ENST00000508342 FAM210BQ96KR6 192 aa2.5□□□□□ -2.01
NEDD4-208ENST00000508342 SMR3AQ99954 134 aa2.5□□□□□ -2.01
NEDD4-208ENST00000508342 MESP1Q9BRJ9 268 aa2.5□□□□□ -2.01
NEDD4-208ENST00000508342 RANGRFQ9HD47 186 aaPredicted RBP2.5□□□□□ -2.01
NEDD4-208ENST00000508342 ZNF230Q9UIE0 474 aaPredicted RBP2.5□□□□□ -2.01
NEDD4-208ENST00000508342 USP9XQ93008 2570 aaPredicted RBP2.5□□□□□ -2.01
NEDD4-208ENST00000508342 A0A0B4J2E0 115 aa2.5□□□□□ -2.01
NEDD4-208ENST00000508342 UBE2L5PA0A1B0GUS4 154 aa2.5□□□□□ -2.01
NEDD4-208ENST00000508342 A0A1B0GX12 115 aa2.5□□□□□ -2.01
NEDD4-208ENST00000508342 A4D1N5 150 aa2.5□□□□□ -2.01
NEDD4-208ENST00000508342 J3QT63 122 aa2.5□□□□□ -2.01
NEDD4-208ENST00000508342 PLPP2O43688 288 aa2.5□□□□□ -2.01
NEDD4-208ENST00000508342 TYROBPO43914 113 aa2.5□□□□□ -2.01
NEDD4-208ENST00000508342 PDCD6O75340 191 aa2.5□□□□□ -2.01
NEDD4-208ENST00000508342 ZNF324O75467 553 aaPredicted RBP2.5□□□□□ -2.01
NEDD4-208ENST00000508342 HSBP1O75506 76 aa2.5□□□□□ -2.01
NEDD4-208ENST00000508342 FAM157CP0CG43 387 aa2.5□□□□□ -2.01
NEDD4-208ENST00000508342 IL7P13232 177 aa2.5□□□□□ -2.01
NEDD4-208ENST00000508342 ZP3P21754 424 aa2.5□□□□□ -2.01
NEDD4-208ENST00000508342 TAGLN2P37802 199 aaKnown RBP2.5□□□□□ -2.01
NEDD4-208ENST00000508342 NKX2-5P52952 324 aaPredicted RBP2.5□□□□□ -2.01
NEDD4-208ENST00000508342 ERVS71-1P61550 626 aa2.5□□□□□ -2.01
NEDD4-208ENST00000508342 LSM6P62312 80 aaKnown RBP2.5□□□□□ -2.01
NEDD4-208ENST00000508342 RNASEKQ6P5S7 137 aaKnown RBP2.5□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms