RNA–Protein interactions for RNA: ENST00000508304.5

TRAPPC13-209, Transcript of trafficking protein particle complex 13, humanhuman

TSL 2

Gene TRAPPC13, Length 729 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-209ENST00000508304 ANKRD29Q8N6D5 301 aa2.22□□□□□ -2.05
TRAPPC13-209ENST00000508304 OR11H2Q8NH07 326 aa2.22□□□□□ -2.05
TRAPPC13-209ENST00000508304 LMX1AQ8TE12 382 aa2.22□□□□□ -2.05
TRAPPC13-209ENST00000508304 ROPN1LQ96C74 230 aa2.22□□□□□ -2.05
TRAPPC13-209ENST00000508304 CAPZA3Q96KX2 299 aa2.22□□□□□ -2.05
TRAPPC13-209ENST00000508304 PRAP1Q96NZ9 151 aa2.22□□□□□ -2.05
TRAPPC13-209ENST00000508304 PPP1R2P1Q96PQ5 205 aa2.22□□□□□ -2.05
TRAPPC13-209ENST00000508304 KLF6Q99612 283 aaPredicted RBP2.22□□□□□ -2.05
TRAPPC13-209ENST00000508304 SIGMAR1Q99720 223 aa2.22□□□□□ -2.05
TRAPPC13-209ENST00000508304 SELENOSQ9BQE4 189 aa2.22□□□□□ -2.05
TRAPPC13-209ENST00000508304 NMNAT1Q9HAN9 279 aaPredicted RBP2.22□□□□□ -2.05
TRAPPC13-209ENST00000508304 PRELID3BQ9Y3B1 194 aa2.22□□□□□ -2.05
TRAPPC13-209ENST00000508304 FAM32AQ9Y421 112 aaKnown RBP2.22□□□□□ -2.05
TRAPPC13-209ENST00000508304 ARL5AQ9Y689 179 aa2.22□□□□□ -2.05
TRAPPC13-209ENST00000508304 ZFYVE9O95405 1425 aa2.22□□□□□ -2.05
TRAPPC13-209ENST00000508304 KIF26AQ9ULI4 1882 aaPredicted RBP2.22□□□□□ -2.05
TRAPPC13-209ENST00000508304 THSD7AQ9UPZ6 1657 aa2.22□□□□□ -2.05
TRAPPC13-209ENST00000508304 TTC21AQ8NDW8 1320 aa2.21□□□□□ -2.06
TRAPPC13-209ENST00000508304 GRIN2BQ13224 1484 aa2.21□□□□□ -2.06
TRAPPC13-209ENST00000508304 IGHV3-73A0A0B4J1V6 119 aa2.21□□□□□ -2.06
TRAPPC13-209ENST00000508304 LOC102725191A0A1B0GVB3 256 aa2.21□□□□□ -2.06
TRAPPC13-209ENST00000508304 TMEM269A0A1B0GVZ9 245 aa2.21□□□□□ -2.06
TRAPPC13-209ENST00000508304 VPS37CA5D8V6 355 aaPredicted RBP2.21□□□□□ -2.06
TRAPPC13-209ENST00000508304 CDS2O95674 445 aa2.21□□□□□ -2.06
TRAPPC13-209ENST00000508304 IGLV6-57P01721 117 aa2.21□□□□□ -2.06
TRAPPC13-209ENST00000508304 ZNF705DP0CH99 300 aaPredicted RBP2.21□□□□□ -2.06
TRAPPC13-209ENST00000508304 FGF6P10767 208 aa2.21□□□□□ -2.06
TRAPPC13-209ENST00000508304 CRYBB3P26998 211 aa2.21□□□□□ -2.06
TRAPPC13-209ENST00000508304 SERPINB10P48595 397 aa2.21□□□□□ -2.06
TRAPPC13-209ENST00000508304 TAS2R20P59543 309 aa2.21□□□□□ -2.06
TRAPPC13-209ENST00000508304 AP1S1P61966 158 aa2.21□□□□□ -2.06
TRAPPC13-209ENST00000508304 HTR4Q13639 388 aa2.21□□□□□ -2.06
TRAPPC13-209ENST00000508304 KRTAP25-1Q3LHN0 102 aa2.21□□□□□ -2.06
TRAPPC13-209ENST00000508304 C1orf158Q8N1D5 194 aa2.21□□□□□ -2.06
TRAPPC13-209ENST00000508304 PACRGLQ8N7B6 248 aa2.21□□□□□ -2.06
TRAPPC13-209ENST00000508304 OR2T4Q8NH00 348 aa2.21□□□□□ -2.06
TRAPPC13-209ENST00000508304 MCFD2Q8NI22 146 aa2.21□□□□□ -2.06
TRAPPC13-209ENST00000508304 TMEM222Q9H0R3 208 aa2.21□□□□□ -2.06
TRAPPC13-209ENST00000508304 DCSTAMPQ9H295 470 aa2.21□□□□□ -2.06
TRAPPC13-209ENST00000508304 SMDT1Q9H4I9 107 aa2.21□□□□□ -2.06
TRAPPC13-209ENST00000508304 ENY2Q9NPA8 101 aa2.21□□□□□ -2.06
TRAPPC13-209ENST00000508304 PRTFDC1Q9NRG1 225 aa2.21□□□□□ -2.06
TRAPPC13-209ENST00000508304 CMTM6Q9NX76 183 aa2.21□□□□□ -2.06
TRAPPC13-209ENST00000508304 MARCOQ9UEW3 520 aaPredicted RBP2.21□□□□□ -2.06
TRAPPC13-209ENST00000508304 COQ4Q9Y3A0 265 aa2.21□□□□□ -2.06
TRAPPC13-209ENST00000508304 R4GN34 69 aa2.21□□□□□ -2.06
TRAPPC13-209ENST00000508304 ZNF638Q14966 1978 aaKnown RBP2.21□□□□□ -2.06
TRAPPC13-209ENST00000508304 C9JCJ5 164 aa2.2□□□□□ -2.06
TRAPPC13-209ENST00000508304 E5RI56 91 aa2.2□□□□□ -2.06
TRAPPC13-209ENST00000508304 INMT-MINDY4F8WBC2 141 aa2.2□□□□□ -2.06
TRAPPC13-209ENST00000508304 BHLHE40O14503 412 aa2.2□□□□□ -2.06
TRAPPC13-209ENST00000508304 OR5F1O95221 314 aa2.2□□□□□ -2.06
TRAPPC13-209ENST00000508304 CPSF4O95639 269 aaKnown RBP2.2□□□□□ -2.06
TRAPPC13-209ENST00000508304 SOD1P00441 154 aa2.2□□□□□ -2.06
TRAPPC13-209ENST00000508304 ZNF22P17026 224 aaPredicted RBP2.2□□□□□ -2.06
TRAPPC13-209ENST00000508304 ZNF140P52738 457 aaPredicted RBP2.2□□□□□ -2.06
TRAPPC13-209ENST00000508304 RWDD2BP57060 319 aa2.2□□□□□ -2.06
TRAPPC13-209ENST00000508304 TAS2R30P59541 319 aa2.2□□□□□ -2.06
TRAPPC13-209ENST00000508304 VBP1P61758 197 aa2.2□□□□□ -2.06
TRAPPC13-209ENST00000508304 RPL30P62888 115 aaKnown RBP2.2□□□□□ -2.06
TRAPPC13-209ENST00000508304 HIST1H3AP68431 136 aa2.2□□□□□ -2.06
TRAPPC13-209ENST00000508304 H3F3AP84243 136 aa2.2□□□□□ -2.06
TRAPPC13-209ENST00000508304 ZNF117Q03924 483 aa2.2□□□□□ -2.06
TRAPPC13-209ENST00000508304 LPCAT3Q6P1A2 487 aa2.2□□□□□ -2.06
TRAPPC13-209ENST00000508304 OR10P1Q8NGE3 313 aa2.2□□□□□ -2.06
TRAPPC13-209ENST00000508304 OR5C1Q8NGR4 320 aa2.2□□□□□ -2.06
TRAPPC13-209ENST00000508304 RAD51AP1Q96B01 352 aa2.2□□□□□ -2.06
TRAPPC13-209ENST00000508304 TXNL4BQ9NX01 149 aaKnown RBP2.2□□□□□ -2.06
TRAPPC13-209ENST00000508304 PRELID1Q9Y255 219 aa2.2□□□□□ -2.06
TRAPPC13-209ENST00000508304 NID2Q14112 1375 aa2.2□□□□□ -2.06
TRAPPC13-209ENST00000508304 GPR179Q6PRD1 2367 aa2.2□□□□□ -2.06
TRAPPC13-209ENST00000508304 DCCP43146 1447 aa2.19□□□□□ -2.06
TRAPPC13-209ENST00000508304 A0A087WUJ7 227 aa2.19□□□□□ -2.06
TRAPPC13-209ENST00000508304 A0A1B0GU33 70 aa2.19□□□□□ -2.06
TRAPPC13-209ENST00000508304 A0A1B0GW54 56 aa2.19□□□□□ -2.06
TRAPPC13-209ENST00000508304 OR4C46A6NHA9 309 aa2.19□□□□□ -2.06
TRAPPC13-209ENST00000508304 PIRO00625 290 aa2.19□□□□□ -2.06
TRAPPC13-209ENST00000508304 PDE6DO43924 150 aa2.19□□□□□ -2.06
TRAPPC13-209ENST00000508304 IGHV1-69P01742 117 aa2.19□□□□□ -2.06
TRAPPC13-209ENST00000508304 HLA-DRB1P01911 266 aa2.19□□□□□ -2.06
TRAPPC13-209ENST00000508304 TTRP02766 147 aa2.19□□□□□ -2.06
TRAPPC13-209ENST00000508304 HRES1P13985 223 aa2.19□□□□□ -2.06
TRAPPC13-209ENST00000508304 HIST1H1TP22492 207 aaPredicted RBP2.19□□□□□ -2.06
TRAPPC13-209ENST00000508304 S100A7P31151 101 aa2.19□□□□□ -2.06
TRAPPC13-209ENST00000508304 RPL5P46777 297 aaKnown RBP2.19□□□□□ -2.06
TRAPPC13-209ENST00000508304 DEFA1P59665 94 aa2.19□□□□□ -2.06
TRAPPC13-209ENST00000508304 SNRPD2P62316 118 aaKnown RBP2.19□□□□□ -2.06
TRAPPC13-209ENST00000508304 KCNJ8Q15842 424 aa2.19□□□□□ -2.06
TRAPPC13-209ENST00000508304 WDR59Q6PJI9 974 aa2.19□□□□□ -2.06
TRAPPC13-209ENST00000508304 TMPPEQ6ZT21 453 aa2.19□□□□□ -2.06
TRAPPC13-209ENST00000508304 LYPD6Q86Y78 171 aa2.19□□□□□ -2.06
TRAPPC13-209ENST00000508304 Q8NAQ8 132 aa2.19□□□□□ -2.06
TRAPPC13-209ENST00000508304 PXT1Q8NFP0 134 aa2.19□□□□□ -2.06
TRAPPC13-209ENST00000508304 AP3S1Q92572 193 aa2.19□□□□□ -2.06
TRAPPC13-209ENST00000508304 KLK6Q92876 244 aa2.19□□□□□ -2.06
TRAPPC13-209ENST00000508304 FGF13Q92913 245 aa2.19□□□□□ -2.06
TRAPPC13-209ENST00000508304 UPK3BQ9BT76 320 aa2.19□□□□□ -2.06
TRAPPC13-209ENST00000508304 C9orf16Q9BUW7 83 aa2.19□□□□□ -2.06
TRAPPC13-209ENST00000508304 CCDC90BQ9GZT6 254 aa2.19□□□□□ -2.06
TRAPPC13-209ENST00000508304 C11orf1Q9H5F2 150 aa2.19□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms