RNA–Protein interactions for RNA: ENST00000508037.1

HMGB3P16-201, Transcript of high mobility group box 3 pseudogene 16, humanhuman

BASIC

Gene HMGB3P16, Length 287 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P16-201ENST00000508037 G6PCP35575 357 aa4.15□□□□□ -1.75
HMGB3P16-201ENST00000508037 TIMP3P35625 211 aa4.15□□□□□ -1.75
HMGB3P16-201ENST00000508037 THBS3P49746 956 aa4.15□□□□□ -1.75
HMGB3P16-201ENST00000508037 ATP5IP56385 69 aaPredicted RBP4.15□□□□□ -1.75
HMGB3P16-201ENST00000508037 GNB1P62873 340 aa4.15□□□□□ -1.75
HMGB3P16-201ENST00000508037 SUMO1P63165 101 aaKnown RBP4.15□□□□□ -1.75
HMGB3P16-201ENST00000508037 TFF3Q07654 80 aa4.15□□□□□ -1.75
HMGB3P16-201ENST00000508037 ZNF816Q0VGE8 651 aaPredicted RBP4.15□□□□□ -1.75
HMGB3P16-201ENST00000508037 EIF4EBP1Q13541 118 aaPredicted RBP4.15□□□□□ -1.75
HMGB3P16-201ENST00000508037 CLEC12BQ2HXU8 276 aa4.15□□□□□ -1.75
HMGB3P16-201ENST00000508037 FAM162BQ5T6X4 162 aa4.15□□□□□ -1.75
HMGB3P16-201ENST00000508037 ABHD17BQ5VST6 288 aa4.15□□□□□ -1.75
HMGB3P16-201ENST00000508037 PPP1R32Q7Z5V6 425 aa4.15□□□□□ -1.75
HMGB3P16-201ENST00000508037 TUSC5Q8IXB3 177 aa4.15□□□□□ -1.75
HMGB3P16-201ENST00000508037 C1orf174Q8IYL3 243 aa4.15□□□□□ -1.75
HMGB3P16-201ENST00000508037 SCCPDHQ8NBX0 429 aa4.15□□□□□ -1.75
HMGB3P16-201ENST00000508037 OR1L6Q8NGR2 347 aa4.15□□□□□ -1.75
HMGB3P16-201ENST00000508037 OR4A16Q8NH70 328 aa4.15□□□□□ -1.75
HMGB3P16-201ENST00000508037 PPP1R35Q8TAP8 253 aa4.15□□□□□ -1.75
HMGB3P16-201ENST00000508037 C11orf52Q96A22 123 aa4.15□□□□□ -1.75
HMGB3P16-201ENST00000508037 SDSLQ96GA7 329 aa4.15□□□□□ -1.75
HMGB3P16-201ENST00000508037 PLPPR2Q96GM1 343 aa4.15□□□□□ -1.75
HMGB3P16-201ENST00000508037 ZNF488Q96MN9 340 aa4.15□□□□□ -1.75
HMGB3P16-201ENST00000508037 TMEM208Q9BTX3 173 aa4.15□□□□□ -1.75
HMGB3P16-201ENST00000508037 C19orf24Q9BVV8 132 aa4.15□□□□□ -1.75
HMGB3P16-201ENST00000508037 PATZ1Q9HBE1 687 aaKnown RBP4.15□□□□□ -1.75
HMGB3P16-201ENST00000508037 NPVFQ9HCQ7 196 aa4.15□□□□□ -1.75
HMGB3P16-201ENST00000508037 ENY2Q9NPA8 101 aa4.15□□□□□ -1.75
HMGB3P16-201ENST00000508037 TMEM167BQ9NRX6 74 aa4.15□□□□□ -1.75
HMGB3P16-201ENST00000508037 UQCR10Q9UDW1 63 aa4.15□□□□□ -1.75
HMGB3P16-201ENST00000508037 SLC45A2Q9UMX9 530 aa4.15□□□□□ -1.75
HMGB3P16-201ENST00000508037 SPAG17Q6Q759 2223 aa4.15□□□□□ -1.75
HMGB3P16-201ENST00000508037 KNL1Q8NG31 2342 aa4.14□□□□□ -1.75
HMGB3P16-201ENST00000508037 TRGV8A0A0C4DH27 118 aa4.14□□□□□ -1.75
HMGB3P16-201ENST00000508037 A0A1W2PR80 420 aa4.14□□□□□ -1.75
HMGB3P16-201ENST00000508037 C15orf62A8K5M9 175 aa4.14□□□□□ -1.75
HMGB3P16-201ENST00000508037 IQCF6A8MYZ5 107 aa4.14□□□□□ -1.75
HMGB3P16-201ENST00000508037 C12orf77C9JDV5 145 aa4.14□□□□□ -1.75
HMGB3P16-201ENST00000508037 NTN3O00634 580 aaPredicted RBP4.14□□□□□ -1.75
HMGB3P16-201ENST00000508037 YPEL1O60688 119 aa4.14□□□□□ -1.75
HMGB3P16-201ENST00000508037 RAMP3O60896 148 aa4.14□□□□□ -1.75
HMGB3P16-201ENST00000508037 RHBDL1O75783 438 aa4.14□□□□□ -1.75
HMGB3P16-201ENST00000508037 CER1O95813 267 aa4.14□□□□□ -1.75
HMGB3P16-201ENST00000508037 HLA-DQA1P01909 254 aa4.14□□□□□ -1.75
HMGB3P16-201ENST00000508037 C1QTNF9P0C862 333 aa4.14□□□□□ -1.75
HMGB3P16-201ENST00000508037 ARL14EPLP0DKL9 152 aa4.14□□□□□ -1.75
HMGB3P16-201ENST00000508037 CCL2P13500 99 aa4.14□□□□□ -1.75
HMGB3P16-201ENST00000508037 GCHFRP30047 84 aa4.14□□□□□ -1.75
HMGB3P16-201ENST00000508037 WNT5AP41221 380 aa4.14□□□□□ -1.75
HMGB3P16-201ENST00000508037 GPR12P47775 334 aa4.14□□□□□ -1.75
HMGB3P16-201ENST00000508037 ATP5G3P48201 142 aa4.14□□□□□ -1.75
HMGB3P16-201ENST00000508037 LHX2P50458 406 aa4.14□□□□□ -1.75
HMGB3P16-201ENST00000508037 CASP6P55212 293 aa4.14□□□□□ -1.75
HMGB3P16-201ENST00000508037 LGALS4P56470 323 aa4.14□□□□□ -1.75
HMGB3P16-201ENST00000508037 EDDM3BP56851 147 aa4.14□□□□□ -1.75
HMGB3P16-201ENST00000508037 CLDN18P56856 261 aa4.14□□□□□ -1.75
HMGB3P16-201ENST00000508037 TAS2R45P59539 299 aa4.14□□□□□ -1.75
HMGB3P16-201ENST00000508037 UBE2G2P60604 165 aa4.14□□□□□ -1.75
HMGB3P16-201ENST00000508037 SRYQ05066 204 aa4.14□□□□□ -1.75
HMGB3P16-201ENST00000508037 PMCHL1Q16048 86 aa4.14□□□□□ -1.75
HMGB3P16-201ENST00000508037 HLA-DRB5Q30154 266 aa4.14□□□□□ -1.75
HMGB3P16-201ENST00000508037 HLA-BQ31612 363 aa4.14□□□□□ -1.75
HMGB3P16-201ENST00000508037 SMIM21Q3B7S5 101 aa4.14□□□□□ -1.75
HMGB3P16-201ENST00000508037 TIGITQ495A1 244 aa4.14□□□□□ -1.75
HMGB3P16-201ENST00000508037 DCAF12Q5T6F0 453 aa4.14□□□□□ -1.75
HMGB3P16-201ENST00000508037 TPTE2P1Q5T6R2 138 aa4.14□□□□□ -1.75
HMGB3P16-201ENST00000508037 PRAMEF5Q5TYX0 476 aa4.14□□□□□ -1.75
HMGB3P16-201ENST00000508037 PRAMEF6Q5VXH4 476 aa4.14□□□□□ -1.75
HMGB3P16-201ENST00000508037 CDCP2Q5VXM1 449 aa4.14□□□□□ -1.75
HMGB3P16-201ENST00000508037 CYB5R2Q6BCY4 276 aa4.14□□□□□ -1.75
HMGB3P16-201ENST00000508037 SLC23A3Q6PIS1 610 aa4.14□□□□□ -1.75
HMGB3P16-201ENST00000508037 RASL11AQ6T310 242 aa4.14□□□□□ -1.75
HMGB3P16-201ENST00000508037 C6orf15Q6UXA7 325 aaPredicted RBP4.14□□□□□ -1.75
HMGB3P16-201ENST00000508037 C19orf35Q6ZS72 473 aa4.14□□□□□ -1.75
HMGB3P16-201ENST00000508037 MYPOPQ86VE0 399 aaPredicted RBP4.14□□□□□ -1.75
HMGB3P16-201ENST00000508037 TMEM256Q8N2U0 113 aa4.14□□□□□ -1.75
HMGB3P16-201ENST00000508037 ZNF808Q8N4W9 903 aaPredicted RBP4.14□□□□□ -1.75
HMGB3P16-201ENST00000508037 OR2M7Q8NG81 312 aa4.14□□□□□ -1.75
HMGB3P16-201ENST00000508037 OR5B3Q8NH48 314 aa4.14□□□□□ -1.75
HMGB3P16-201ENST00000508037 OR1L1Q8NH94 360 aa4.14□□□□□ -1.75
HMGB3P16-201ENST00000508037 GATAD1Q8WUU5 269 aa4.14□□□□□ -1.75
HMGB3P16-201ENST00000508037 BCL2L2Q92843 193 aaPredicted RBP4.14□□□□□ -1.75
HMGB3P16-201ENST00000508037 SLC35E1Q96K37 410 aa4.14□□□□□ -1.75
HMGB3P16-201ENST00000508037 WFIKKN1Q96NZ8 548 aa4.14□□□□□ -1.75
HMGB3P16-201ENST00000508037 YPEL2Q96QA6 119 aa4.14□□□□□ -1.75
HMGB3P16-201ENST00000508037 HSPB9Q9BQS6 159 aa4.14□□□□□ -1.75
HMGB3P16-201ENST00000508037 CHRDL1Q9BU40 450 aa4.14□□□□□ -1.75
HMGB3P16-201ENST00000508037 OR2J1Q9GZK6 312 aa4.14□□□□□ -1.75
HMGB3P16-201ENST00000508037 WNT10AQ9GZT5 417 aa4.14□□□□□ -1.75
HMGB3P16-201ENST00000508037 CXXC4Q9H2H0 198 aa4.14□□□□□ -1.75
HMGB3P16-201ENST00000508037 AKIRIN1Q9H9L7 192 aaPredicted RBP4.14□□□□□ -1.75
HMGB3P16-201ENST00000508037 HES4Q9HCC6 221 aa4.14□□□□□ -1.75
HMGB3P16-201ENST00000508037 HEYLQ9NQ87 328 aaPredicted RBP4.14□□□□□ -1.75
HMGB3P16-201ENST00000508037 OSTCQ9NRP0 149 aa4.14□□□□□ -1.75
HMGB3P16-201ENST00000508037 SLC25A10Q9UBX3 287 aaPredicted RBP4.14□□□□□ -1.75
HMGB3P16-201ENST00000508037 ZFP30Q9Y2G7 519 aa4.14□□□□□ -1.75
HMGB3P16-201ENST00000508037 RNF114Q9Y508 228 aa4.14□□□□□ -1.75
HMGB3P16-201ENST00000508037 TRAV39A0A0B4J263 110 aa4.13□□□□□ -1.75
HMGB3P16-201ENST00000508037 TRAV38-1A0A0B4J264 116 aa4.13□□□□□ -1.75
HMGB3P16-201ENST00000508037 C17orf98A8MV24 154 aa4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms