RNA–Protein interactions for RNA: ENST00000507778.1

HMGB1P28-201, Transcript of high mobility group box 1 pseudogene 28, humanhuman

BASIC

Gene HMGB1P28, Length 552 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P28-201ENST00000507778 OR51I2Q9H344 312 aa1.52□□□□□ -2.17
HMGB1P28-201ENST00000507778 ANAPC10Q9UM13 185 aa1.52□□□□□ -2.17
HMGB1P28-201ENST00000507778 REREQ9P2R6 1566 aa1.51□□□□□ -2.17
HMGB1P28-201ENST00000507778 DENND4BO75064 1496 aaPredicted RBP1.51□□□□□ -2.17
HMGB1P28-201ENST00000507778 NUP160Q12769 1436 aa1.51□□□□□ -2.17
HMGB1P28-201ENST00000507778 ABCC12Q96J65 1359 aa1.51□□□□□ -2.17
HMGB1P28-201ENST00000507778 TRPM6Q9BX84 2022 aa1.51□□□□□ -2.17
HMGB1P28-201ENST00000507778 ZNF532Q9HCE3 1301 aa1.51□□□□□ -2.17
HMGB1P28-201ENST00000507778 TMSB15BA0A087X1C1 80 aa1.51□□□□□ -2.17
HMGB1P28-201ENST00000507778 A0A1B0GVG6 124 aa1.51□□□□□ -2.17
HMGB1P28-201ENST00000507778 A0A1B0GW54 56 aa1.51□□□□□ -2.17
HMGB1P28-201ENST00000507778 RFPL4AA6NLU0 287 aa1.51□□□□□ -2.17
HMGB1P28-201ENST00000507778 SIGLEC16A6NMB1 481 aa1.51□□□□□ -2.17
HMGB1P28-201ENST00000507778 C21orf140B9A014 251 aa1.51□□□□□ -2.17
HMGB1P28-201ENST00000507778 DISC1C4P0D8 188 aa1.51□□□□□ -2.17
HMGB1P28-201ENST00000507778 RFPL4AL1F8VTS6 287 aa1.51□□□□□ -2.17
HMGB1P28-201ENST00000507778 KRT75O95678 551 aa1.51□□□□□ -2.17
HMGB1P28-201ENST00000507778 CA5AP35218 305 aa1.51□□□□□ -2.17
HMGB1P28-201ENST00000507778 TMEM258P61165 79 aa1.51□□□□□ -2.17
HMGB1P28-201ENST00000507778 RELAQ04206 551 aa1.51□□□□□ -2.17
HMGB1P28-201ENST00000507778 BATFQ16520 125 aa1.51□□□□□ -2.17
HMGB1P28-201ENST00000507778 MIAQ16674 131 aa1.51□□□□□ -2.17
HMGB1P28-201ENST00000507778 C1orf194Q5T5A4 169 aa1.51□□□□□ -2.17
HMGB1P28-201ENST00000507778 C1orf195Q5TG92 126 aa1.51□□□□□ -2.17
HMGB1P28-201ENST00000507778 UMODL1-AS1Q8N2C9 162 aa1.51□□□□□ -2.17
HMGB1P28-201ENST00000507778 OR51T1Q8NGJ9 327 aa1.51□□□□□ -2.17
HMGB1P28-201ENST00000507778 TESCQ96BS2 214 aa1.51□□□□□ -2.17
HMGB1P28-201ENST00000507778 C3orf18Q9UK00 162 aa1.51□□□□□ -2.17
HMGB1P28-201ENST00000507778 COQ4Q9Y3A0 265 aa1.51□□□□□ -2.17
HMGB1P28-201ENST00000507778 ZNF638Q14966 1978 aaKnown RBP1.5□□□□□ -2.17
HMGB1P28-201ENST00000507778 IGHV1-69-2A0A0G2JMI3 117 aa1.5□□□□□ -2.17
HMGB1P28-201ENST00000507778 KLRC4O43908 158 aa1.5□□□□□ -2.17
HMGB1P28-201ENST00000507778 RPS12P25398 132 aaKnown RBP1.5□□□□□ -2.17
HMGB1P28-201ENST00000507778 CCR2P41597 374 aa1.5□□□□□ -2.17
HMGB1P28-201ENST00000507778 IDH3GP51553 393 aaPredicted RBP1.5□□□□□ -2.17
HMGB1P28-201ENST00000507778 AP2S1P53680 142 aaPredicted RBP1.5□□□□□ -2.17
HMGB1P28-201ENST00000507778 AKR1C1Q04828 323 aa1.5□□□□□ -2.17
HMGB1P28-201ENST00000507778 CDKL4Q5MAI5 379 aa1.5□□□□□ -2.17
HMGB1P28-201ENST00000507778 RAB8BQ92930 207 aa1.5□□□□□ -2.17
HMGB1P28-201ENST00000507778 CXorf21Q9HAI6 301 aa1.5□□□□□ -2.17
HMGB1P28-201ENST00000507778 GPR84Q9NQS5 396 aa1.5□□□□□ -2.17
HMGB1P28-201ENST00000507778 PRELID1Q9Y255 219 aa1.5□□□□□ -2.17
HMGB1P28-201ENST00000507778 C9orf84Q5VXU9 1444 aa1.49□□□□□ -2.17
HMGB1P28-201ENST00000507778 OTOFQ9HC10 1997 aa1.49□□□□□ -2.17
HMGB1P28-201ENST00000507778 IGHV3-64A0A075B6Q5 118 aa1.49□□□□□ -2.17
HMGB1P28-201ENST00000507778 OR4C45A6NMZ5 311 aa1.49□□□□□ -2.17
HMGB1P28-201ENST00000507778 ACOX3O15254 700 aa1.49□□□□□ -2.17
HMGB1P28-201ENST00000507778 UCHL3P15374 230 aa1.49□□□□□ -2.17
HMGB1P28-201ENST00000507778 CCL1P22362 96 aa1.49□□□□□ -2.17
HMGB1P28-201ENST00000507778 PSMB8P28062 276 aa1.49□□□□□ -2.17
HMGB1P28-201ENST00000507778 EMP1P54849 157 aa1.49□□□□□ -2.17
HMGB1P28-201ENST00000507778 GLO1Q04760 184 aa1.49□□□□□ -2.17
HMGB1P28-201ENST00000507778 ZNF791Q3KP31 576 aaPredicted RBP1.49□□□□□ -2.17
HMGB1P28-201ENST00000507778 CLVS2Q5SYC1 327 aa1.49□□□□□ -2.17
HMGB1P28-201ENST00000507778 OR10K2Q6IF99 312 aa1.49□□□□□ -2.17
HMGB1P28-201ENST00000507778 CD200R1LQ6Q8B3 271 aa1.49□□□□□ -2.17
HMGB1P28-201ENST00000507778 LYZL1Q6UWQ5 148 aa1.49□□□□□ -2.17
HMGB1P28-201ENST00000507778 LRRC28Q86X40 367 aaPredicted RBP1.49□□□□□ -2.17
HMGB1P28-201ENST00000507778 SLC22A24Q8N4F4 322 aa1.49□□□□□ -2.17
HMGB1P28-201ENST00000507778 OR1L8Q8NGR8 309 aa1.49□□□□□ -2.17
HMGB1P28-201ENST00000507778 DIRAS2Q96HU8 199 aa1.49□□□□□ -2.17
HMGB1P28-201ENST00000507778 ZNF625Q96I27 306 aaPredicted RBP1.49□□□□□ -2.17
HMGB1P28-201ENST00000507778 AK3Q9UIJ7 227 aa1.49□□□□□ -2.17
HMGB1P28-201ENST00000507778 PXMP4Q9Y6I8 212 aa1.49□□□□□ -2.17
HMGB1P28-201ENST00000507778 ICE1Q9Y2F5 2266 aa1.49□□□□□ -2.17
HMGB1P28-201ENST00000507778 MAP3K5Q99683 1374 aa1.48□□□□□ -2.17
HMGB1P28-201ENST00000507778 A0A0J9YW62 118 aa1.48□□□□□ -2.17
HMGB1P28-201ENST00000507778 TMEM269A0A1B0GVZ9 245 aa1.48□□□□□ -2.17
HMGB1P28-201ENST00000507778 CREBL2O60519 120 aaPredicted RBP1.48□□□□□ -2.17
HMGB1P28-201ENST00000507778 GPX1P07203 203 aa1.48□□□□□ -2.17
HMGB1P28-201ENST00000507778 KRT7P08729 469 aa1.48□□□□□ -2.17
HMGB1P28-201ENST00000507778 MAP2K4P45985 399 aa1.48□□□□□ -2.17
HMGB1P28-201ENST00000507778 REG1BP48304 166 aa1.48□□□□□ -2.17
HMGB1P28-201ENST00000507778 TPI1P60174 286 aa1.48□□□□□ -2.17
HMGB1P28-201ENST00000507778 MAGOHP61326 146 aaKnown RBP1.48□□□□□ -2.17
HMGB1P28-201ENST00000507778 NAA20P61599 178 aa1.48□□□□□ -2.17
HMGB1P28-201ENST00000507778 EMX1Q04741 257 aaPredicted RBP1.48□□□□□ -2.17
HMGB1P28-201ENST00000507778 ZNF550Q7Z398 422 aa1.48□□□□□ -2.17
HMGB1P28-201ENST00000507778 GID4Q8IVV7 300 aa1.48□□□□□ -2.17
HMGB1P28-201ENST00000507778 OR8B12Q8NGG6 310 aa1.48□□□□□ -2.17
HMGB1P28-201ENST00000507778 SGMS2Q8NHU3 365 aa1.48□□□□□ -2.17
HMGB1P28-201ENST00000507778 SPACA4Q8TDM5 124 aa1.48□□□□□ -2.17
HMGB1P28-201ENST00000507778 RNF133Q8WVZ7 376 aa1.48□□□□□ -2.17
HMGB1P28-201ENST00000507778 IMMP2LQ96T52 175 aa1.48□□□□□ -2.17
HMGB1P28-201ENST00000507778 XAGE1AQ9HD64 81 aa1.48□□□□□ -2.17
HMGB1P28-201ENST00000507778 RBM7Q9Y580 266 aaKnown RBP1.48□□□□□ -2.17
HMGB1P28-201ENST00000507778 TIMM9Q9Y5J7 89 aa1.48□□□□□ -2.17
HMGB1P28-201ENST00000507778 EVC2Q86UK5 1308 aa1.47□□□□□ -2.17
HMGB1P28-201ENST00000507778 ZNF705FA8MVS1 300 aaPredicted RBP1.47□□□□□ -2.17
HMGB1P28-201ENST00000507778 LST1O00453 97 aa1.47□□□□□ -2.17
HMGB1P28-201ENST00000507778 PLA2G10O15496 165 aa1.47□□□□□ -2.17
HMGB1P28-201ENST00000507778 ISG15P05161 165 aa1.47□□□□□ -2.17
HMGB1P28-201ENST00000507778 CCR7P32248 378 aa1.47□□□□□ -2.17
HMGB1P28-201ENST00000507778 HAAOP46952 286 aa1.47□□□□□ -2.17
HMGB1P28-201ENST00000507778 RPL30P62888 115 aaKnown RBP1.47□□□□□ -2.17
HMGB1P28-201ENST00000507778 TNFAIP6P98066 277 aaPredicted RBP1.47□□□□□ -2.17
HMGB1P28-201ENST00000507778 SLC38A11Q08AI6 406 aa1.47□□□□□ -2.17
HMGB1P28-201ENST00000507778 FABP9Q0Z7S8 132 aa1.47□□□□□ -2.17
HMGB1P28-201ENST00000507778 ZNF705AQ6ZN79 300 aaPredicted RBP1.47□□□□□ -2.17
HMGB1P28-201ENST00000507778 KTN1-AS1Q86SY8 53 aa1.47□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms