RNA–Protein interactions for RNA: ENST00000506929.1

CDC42SE2-210, Transcript of CDC42 small effector 2, humanhuman

TSL 3

Gene CDC42SE2, Length 410 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-210ENST00000506929 BBS2Q9BXC9 721 aa0.52□□□□□ -2.33
CDC42SE2-210ENST00000506929 PARD6GQ9BYG4 376 aaPredicted RBP0.52□□□□□ -2.33
CDC42SE2-210ENST00000506929 NSRP1Q9H0G5 558 aaKnown RBP0.52□□□□□ -2.33
CDC42SE2-210ENST00000506929 METTL9Q9H1A3 318 aa0.52□□□□□ -2.33
CDC42SE2-210ENST00000506929 CST9LQ9H4G1 147 aa0.52□□□□□ -2.33
CDC42SE2-210ENST00000506929 ZNHIT6Q9NWK9 470 aaKnown RBP0.52□□□□□ -2.33
CDC42SE2-210ENST00000506929 SBDSQ9Y3A5 250 aaKnown RBP eCLIP0.52□□□□□ -2.33
CDC42SE2-210ENST00000506929 PCYT1BQ9Y5K3 369 aaPredicted RBP0.52□□□□□ -2.33
CDC42SE2-210ENST00000506929 MAP3K19Q56UN5 1328 aa0.52□□□□□ -2.33
CDC42SE2-210ENST00000506929 KMT2DO14686 5537 aa0.52□□□□□ -2.33
CDC42SE2-210ENST00000506929 NCOA6Q14686 2063 aaPredicted RBP0.52□□□□□ -2.33
CDC42SE2-210ENST00000506929 DAPL1A0PJW8 107 aa0.51□□□□□ -2.33
CDC42SE2-210ENST00000506929 OR6C6A6NF89 314 aa0.51□□□□□ -2.33
CDC42SE2-210ENST00000506929 GLI3P10071 1580 aa0.51□□□□□ -2.33
CDC42SE2-210ENST00000506929 CFL1P23528 166 aaKnown RBP0.51□□□□□ -2.33
CDC42SE2-210ENST00000506929 MIPP30301 263 aa0.51□□□□□ -2.33
CDC42SE2-210ENST00000506929 FLT4P35916 1363 aa0.51□□□□□ -2.33
CDC42SE2-210ENST00000506929 PPP1R2P41236 205 aa0.51□□□□□ -2.33
CDC42SE2-210ENST00000506929 TPI1P60174 286 aa0.51□□□□□ -2.33
CDC42SE2-210ENST00000506929 SLAMF1Q13291 335 aa0.51□□□□□ -2.33
CDC42SE2-210ENST00000506929 LRRC26Q2I0M4 334 aa0.51□□□□□ -2.33
CDC42SE2-210ENST00000506929 HLA-DRB5Q30154 266 aa0.51□□□□□ -2.33
CDC42SE2-210ENST00000506929 ARHGAP11BQ3KRB8 267 aa0.51□□□□□ -2.33
CDC42SE2-210ENST00000506929 FAM45BPQ6NSW5 357 aa0.51□□□□□ -2.33
CDC42SE2-210ENST00000506929 PPP1R2P3Q6NXS1 205 aa0.51□□□□□ -2.33
CDC42SE2-210ENST00000506929 S100A7AQ86SG5 101 aa0.51□□□□□ -2.33
CDC42SE2-210ENST00000506929 FAM9CQ8IZT9 166 aa0.51□□□□□ -2.33
CDC42SE2-210ENST00000506929 CDC26Q8NHZ8 85 aa0.51□□□□□ -2.33
CDC42SE2-210ENST00000506929 SLC37A2Q8TED4 501 aa0.51□□□□□ -2.33
CDC42SE2-210ENST00000506929 DDI1Q8WTU0 396 aa0.51□□□□□ -2.33
CDC42SE2-210ENST00000506929 RAB2BQ8WUD1 216 aa0.51□□□□□ -2.33
CDC42SE2-210ENST00000506929 CMTM5Q96DZ9 223 aa0.51□□□□□ -2.33
CDC42SE2-210ENST00000506929 ODF3Q96PU9 254 aa0.51□□□□□ -2.33
CDC42SE2-210ENST00000506929 LLPHQ9BRT6 129 aaKnown RBP0.51□□□□□ -2.33
CDC42SE2-210ENST00000506929 CCDC94Q9BW85 323 aaPredicted RBP0.51□□□□□ -2.33
CDC42SE2-210ENST00000506929 UPF3BQ9BZI7 483 aaKnown RBP0.51□□□□□ -2.33
CDC42SE2-210ENST00000506929 TREM1Q9NP99 234 aa0.51□□□□□ -2.33
CDC42SE2-210ENST00000506929 TIMM22Q9Y584 194 aa0.51□□□□□ -2.33
CDC42SE2-210ENST00000506929 TRAV7A0A075B6U4 112 aa0.5□□□□□ -2.33
CDC42SE2-210ENST00000506929 C9JCJ5 164 aa0.5□□□□□ -2.33
CDC42SE2-210ENST00000506929 ORC5O43913 435 aa0.5□□□□□ -2.33
CDC42SE2-210ENST00000506929 NEMFO60524 1076 aa0.5□□□□□ -2.33
CDC42SE2-210ENST00000506929 MRPS14O60783 128 aaKnown RBP0.5□□□□□ -2.33
CDC42SE2-210ENST00000506929 NPPAP01160 153 aa0.5□□□□□ -2.33
CDC42SE2-210ENST00000506929 HLA-DQB2P05538 268 aa0.5□□□□□ -2.33
CDC42SE2-210ENST00000506929 TPM1P09493 284 aa0.5□□□□□ -2.33
CDC42SE2-210ENST00000506929 LINC00614P0C842 121 aa0.5□□□□□ -2.33
CDC42SE2-210ENST00000506929 CCL5P13501 91 aa0.5□□□□□ -2.33
CDC42SE2-210ENST00000506929 G0S2P27469 103 aa0.5□□□□□ -2.33
CDC42SE2-210ENST00000506929 CASQ1P31415 396 aa0.5□□□□□ -2.33
CDC42SE2-210ENST00000506929 CD151P48509 253 aa0.5□□□□□ -2.33
CDC42SE2-210ENST00000506929 ETV1P50549 477 aa0.5□□□□□ -2.33
CDC42SE2-210ENST00000506929 HADHBP55084 474 aaKnown RBP0.5□□□□□ -2.33
CDC42SE2-210ENST00000506929 SNAP25P60880 206 aa0.5□□□□□ -2.33
CDC42SE2-210ENST00000506929 ITGB3BPQ13352 177 aaPredicted RBP0.5□□□□□ -2.33
CDC42SE2-210ENST00000506929 PMS2P3Q13401 168 aa0.5□□□□□ -2.33
CDC42SE2-210ENST00000506929 JOSD1Q15040 202 aaPredicted RBP0.5□□□□□ -2.33
CDC42SE2-210ENST00000506929 MIAQ16674 131 aa0.5□□□□□ -2.33
CDC42SE2-210ENST00000506929 LYZL1Q6UWQ5 148 aa0.5□□□□□ -2.33
CDC42SE2-210ENST00000506929 RASSF6Q6ZTQ3 369 aa0.5□□□□□ -2.33
CDC42SE2-210ENST00000506929 SPATA24Q86W54 205 aa0.5□□□□□ -2.33
CDC42SE2-210ENST00000506929 ANKRD7Q92527 254 aa0.5□□□□□ -2.33
CDC42SE2-210ENST00000506929 C12orf43Q96C57 262 aaKnown RBP0.5□□□□□ -2.33
CDC42SE2-210ENST00000506929 DOHHQ9BU89 302 aa0.5□□□□□ -2.33
CDC42SE2-210ENST00000506929 TMEM222Q9H0R3 208 aa0.5□□□□□ -2.33
CDC42SE2-210ENST00000506929 C1orf109Q9NX04 203 aa0.5□□□□□ -2.33
CDC42SE2-210ENST00000506929 CFAP45Q9UL16 551 aa0.5□□□□□ -2.33
CDC42SE2-210ENST00000506929 CCDC88AQ3V6T2 1871 aa0.5□□□□□ -2.33
CDC42SE2-210ENST00000506929 UNC13AQ9UPW8 1703 aa0.5□□□□□ -2.33
CDC42SE2-210ENST00000506929 SCAF11Q99590 1463 aaKnown RBP0.49□□□□□ -2.33
CDC42SE2-210ENST00000506929 RIMS2Q9UQ26 1411 aa0.49□□□□□ -2.33
CDC42SE2-210ENST00000506929 KIF24Q5T7B8 1368 aa0.49□□□□□ -2.33
CDC42SE2-210ENST00000506929 SYNRGQ9UMZ2 1314 aa0.49□□□□□ -2.33
CDC42SE2-210ENST00000506929 LOC105371267A0A1B0GV96 52 aa0.49□□□□□ -2.33
CDC42SE2-210ENST00000506929 TMEM269A0A1B0GVZ9 245 aa0.49□□□□□ -2.33
CDC42SE2-210ENST00000506929 H7C2G1 150 aa0.49□□□□□ -2.33
CDC42SE2-210ENST00000506929 SERPINA7P05543 415 aa0.49□□□□□ -2.33
CDC42SE2-210ENST00000506929 TPM3P06753 285 aa0.49□□□□□ -2.33
CDC42SE2-210ENST00000506929 RPSAP08865 295 aaKnown RBP0.49□□□□□ -2.33
CDC42SE2-210ENST00000506929 S100A7P31151 101 aa0.49□□□□□ -2.33
CDC42SE2-210ENST00000506929 RAB14P61106 215 aa0.49□□□□□ -2.33
CDC42SE2-210ENST00000506929 BTN3A2P78410 334 aa0.49□□□□□ -2.33
CDC42SE2-210ENST00000506929 FABP5Q01469 135 aa0.49□□□□□ -2.33
CDC42SE2-210ENST00000506929 LRRC75BQ2VPJ9 315 aa0.49□□□□□ -2.33
CDC42SE2-210ENST00000506929 SYCE1Q8N0S2 351 aa0.49□□□□□ -2.33
CDC42SE2-210ENST00000506929 C17orf78Q8N4C9 275 aa0.49□□□□□ -2.33
CDC42SE2-210ENST00000506929 OR52E4Q8NGH9 312 aa0.49□□□□□ -2.33
CDC42SE2-210ENST00000506929 OR5AK3PQ8NH89 298 aa0.49□□□□□ -2.33
CDC42SE2-210ENST00000506929 MBD3L1Q8WWY6 194 aa0.49□□□□□ -2.33
CDC42SE2-210ENST00000506929 DGCR14Q96DF8 476 aaKnown RBP0.49□□□□□ -2.33
CDC42SE2-210ENST00000506929 MS4A6EQ96DS6 147 aa0.49□□□□□ -2.33
CDC42SE2-210ENST00000506929 CFAP53Q96M91 514 aa0.49□□□□□ -2.33
CDC42SE2-210ENST00000506929 RBP7Q96R05 134 aa0.49□□□□□ -2.33
CDC42SE2-210ENST00000506929 MRPL40Q9NQ50 206 aaKnown RBP0.49□□□□□ -2.33
CDC42SE2-210ENST00000506929 NAT8Q9UHE5 227 aa0.49□□□□□ -2.33
CDC42SE2-210ENST00000506929 A0A1W2PP64 1363 aa0.48□□□□□ -2.33
CDC42SE2-210ENST00000506929 KMT2CQ8NEZ4 4911 aaKnown RBP0.48□□□□□ -2.33
CDC42SE2-210ENST00000506929 TRAV38-1A0A0B4J264 116 aa0.48□□□□□ -2.33
CDC42SE2-210ENST00000506929 F8VZ95 297 aa0.48□□□□□ -2.33
CDC42SE2-210ENST00000506929 GOLGA8MH3BSY2 632 aa0.48□□□□□ -2.33
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