RNA–Protein interactions for RNA: ENST00000506098.5

NUP54-204, Transcript of nucleoporin 54, humanhuman

TSL 4

Gene NUP54, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-204ENST00000506098 DPM3Q9P2X0 92 aa5.83□□□□□ -1.48
NUP54-204ENST00000506098 KCNS2Q9ULS6 477 aa5.83□□□□□ -1.48
NUP54-204ENST00000506098 HIVEP2P31629 2446 aa5.82□□□□□ -1.48
NUP54-204ENST00000506098 TRAV40A0A0B4J280 105 aa5.82□□□□□ -1.48
NUP54-204ENST00000506098 C9orf170A2RU37 121 aa5.82□□□□□ -1.48
NUP54-204ENST00000506098 LINC00473A8K010 186 aa5.82□□□□□ -1.48
NUP54-204ENST00000506098 INMT-MINDY4F8WBC2 141 aa5.82□□□□□ -1.48
NUP54-204ENST00000506098 MPPED1O15442 326 aa5.82□□□□□ -1.48
NUP54-204ENST00000506098 PRAF2O60831 178 aa5.82□□□□□ -1.48
NUP54-204ENST00000506098 IFNA7P01567 189 aa5.82□□□□□ -1.48
NUP54-204ENST00000506098 GAPDHP04406 335 aaKnown RBP5.82□□□□□ -1.48
NUP54-204ENST00000506098 RLN1P04808 185 aa5.82□□□□□ -1.48
NUP54-204ENST00000506098 CT45A6P0DMU7 189 aa5.82□□□□□ -1.48
NUP54-204ENST00000506098 CT45A5P0DMU8 189 aa5.82□□□□□ -1.48
NUP54-204ENST00000506098 CT45A7P0DMV0 189 aa5.82□□□□□ -1.48
NUP54-204ENST00000506098 IGHV4-38-2P0DP08 117 aa5.82□□□□□ -1.48
NUP54-204ENST00000506098 VSIG10L2P0DP72 767 aa5.82□□□□□ -1.48
NUP54-204ENST00000506098 CD99P14209 185 aa5.82□□□□□ -1.48
NUP54-204ENST00000506098 PI3P19957 117 aa5.82□□□□□ -1.48
NUP54-204ENST00000506098 EPHA1P21709 976 aa5.82□□□□□ -1.48
NUP54-204ENST00000506098 F2RP25116 425 aa5.82□□□□□ -1.48
NUP54-204ENST00000506098 S100GP29377 79 aa5.82□□□□□ -1.48
NUP54-204ENST00000506098 SAA4P35542 130 aa5.82□□□□□ -1.48
NUP54-204ENST00000506098 THBS3P49746 956 aa5.82□□□□□ -1.48
NUP54-204ENST00000506098 LGALS4P56470 323 aa5.82□□□□□ -1.48
NUP54-204ENST00000506098 RPL30P62888 115 aaKnown RBP5.82□□□□□ -1.48
NUP54-204ENST00000506098 SUPT4H1P63272 117 aaKnown RBP5.82□□□□□ -1.48
NUP54-204ENST00000506098 FGL1Q08830 312 aa5.82□□□□□ -1.48
NUP54-204ENST00000506098 DIAPH2-AS1Q14236 149 aa5.82□□□□□ -1.48
NUP54-204ENST00000506098 ABCA11PQ4W5N1 156 aa5.82□□□□□ -1.48
NUP54-204ENST00000506098 TPTE2P1Q5T6R2 138 aa5.82□□□□□ -1.48
NUP54-204ENST00000506098 GLDNQ6ZMI3 551 aaPredicted RBP5.82□□□□□ -1.48
NUP54-204ENST00000506098 LHFPL4Q7Z7J7 247 aa5.82□□□□□ -1.48
NUP54-204ENST00000506098 TBC1D26Q86UD7 250 aa5.82□□□□□ -1.48
NUP54-204ENST00000506098 OR8H3Q8N146 312 aa5.82□□□□□ -1.48
NUP54-204ENST00000506098 OR5AN1Q8NGI8 311 aa5.82□□□□□ -1.48
NUP54-204ENST00000506098 NANPQ8TBE9 248 aa5.82□□□□□ -1.48
NUP54-204ENST00000506098 RBPMSQ93062 196 aaKnown RBP5.82□□□□□ -1.48
NUP54-204ENST00000506098 NABP2Q9BQ15 211 aa5.82□□□□□ -1.48
NUP54-204ENST00000506098 IGHV1-3A0A0C4DH29 117 aa5.81□□□□□ -1.48
NUP54-204ENST00000506098 TEX13DA0A0J9YY54 714 aaPredicted RBP5.81□□□□□ -1.48
NUP54-204ENST00000506098 C3orf85A0A1B0GTC6 90 aa5.81□□□□□ -1.48
NUP54-204ENST00000506098 A0A1W2PPI3 338 aa5.81□□□□□ -1.48
NUP54-204ENST00000506098 FAM90A9PA6NNJ1 464 aa5.81□□□□□ -1.48
NUP54-204ENST00000506098 RNF212BA8MTL3 300 aa5.81□□□□□ -1.48
NUP54-204ENST00000506098 A8MV72 311 aaPredicted RBP5.81□□□□□ -1.48
NUP54-204ENST00000506098 H0Y980 276 aa5.81□□□□□ -1.48
NUP54-204ENST00000506098 M0R1X1 148 aa5.81□□□□□ -1.48
NUP54-204ENST00000506098 TCAPO15273 167 aa5.81□□□□□ -1.48
NUP54-204ENST00000506098 RBFOX2O43251 390 aaKnown RBP eCLIP5.81□□□□□ -1.48
NUP54-204ENST00000506098 SFT2D2O95562 160 aa5.81□□□□□ -1.48
NUP54-204ENST00000506098 LY6G6DO95868 133 aa5.81□□□□□ -1.48
NUP54-204ENST00000506098 AKR1C4P17516 323 aa5.81□□□□□ -1.48
NUP54-204ENST00000506098 ANXA7P20073 488 aaKnown RBP5.81□□□□□ -1.48
NUP54-204ENST00000506098 UCP1P25874 307 aa5.81□□□□□ -1.48
NUP54-204ENST00000506098 MC5RP33032 325 aa5.81□□□□□ -1.48
NUP54-204ENST00000506098 RPL35P42766 123 aaKnown RBP5.81□□□□□ -1.48
NUP54-204ENST00000506098 KIR2DS2P43631 304 aa5.81□□□□□ -1.48
NUP54-204ENST00000506098 DYNLT3P51808 116 aa5.81□□□□□ -1.48
NUP54-204ENST00000506098 BRWD1-AS2P59051 145 aa5.81□□□□□ -1.48
NUP54-204ENST00000506098 CATR1Q13166 79 aa5.81□□□□□ -1.48
NUP54-204ENST00000506098 PHLDA2Q53GA4 152 aa5.81□□□□□ -1.48
NUP54-204ENST00000506098 CCDC144NLQ6NUI1 221 aa5.81□□□□□ -1.48
NUP54-204ENST00000506098 REC114Q7Z4M0 266 aa5.81□□□□□ -1.48
NUP54-204ENST00000506098 TMED4Q7Z7H5 227 aa5.81□□□□□ -1.48
NUP54-204ENST00000506098 LYG2Q86SG7 212 aa5.81□□□□□ -1.48
NUP54-204ENST00000506098 TGIF2LXQ8IUE1 241 aa5.81□□□□□ -1.48
NUP54-204ENST00000506098 SGPP2Q8IWX5 399 aa5.81□□□□□ -1.48
NUP54-204ENST00000506098 PDZD9Q8IXQ8 264 aa5.81□□□□□ -1.48
NUP54-204ENST00000506098 SPAG16Q8N0X2 631 aa5.81□□□□□ -1.48
NUP54-204ENST00000506098 DYNAPQ8N1N2 210 aa5.81□□□□□ -1.48
NUP54-204ENST00000506098 ZNF383Q8NA42 475 aa5.81□□□□□ -1.48
NUP54-204ENST00000506098 DMBX1Q8NFW5 382 aa5.81□□□□□ -1.48
NUP54-204ENST00000506098 GLYATL2Q8WU03 294 aa5.81□□□□□ -1.48
NUP54-204ENST00000506098 CFHR4Q92496 578 aa5.81□□□□□ -1.48
NUP54-204ENST00000506098 RPEQ96AT9 228 aa5.81□□□□□ -1.48
NUP54-204ENST00000506098 HYLS1Q96M11 299 aa5.81□□□□□ -1.48
NUP54-204ENST00000506098 TP53RKQ96S44 253 aa5.81□□□□□ -1.48
NUP54-204ENST00000506098 CITED2Q99967 270 aaPredicted RBP5.81□□□□□ -1.48
NUP54-204ENST00000506098 PRDM13Q9H4Q3 707 aa5.81□□□□□ -1.48
NUP54-204ENST00000506098 NAA60Q9H7X0 242 aa5.81□□□□□ -1.48
NUP54-204ENST00000506098 SEPSECSQ9HD40 501 aaKnown RBP5.81□□□□□ -1.48
NUP54-204ENST00000506098 TREM1Q9NP99 234 aa5.81□□□□□ -1.48
NUP54-204ENST00000506098 KCNIP3Q9Y2W7 256 aa5.81□□□□□ -1.48
NUP54-204ENST00000506098 NSD1Q96L73 2696 aaPredicted RBP5.8□□□□□ -1.48
NUP54-204ENST00000506098 A0A0B4J2A0 478 aa5.8□□□□□ -1.48
NUP54-204ENST00000506098 A0A1W2PRD5 423 aa5.8□□□□□ -1.48
NUP54-204ENST00000506098 A0A1W2PRF3 423 aa5.8□□□□□ -1.48
NUP54-204ENST00000506098 A0A1W2PRM7 423 aa5.8□□□□□ -1.48
NUP54-204ENST00000506098 XKRY2A2RUG3 117 aa5.8□□□□□ -1.48
NUP54-204ENST00000506098 C7orf66A4D0T2 115 aa5.8□□□□□ -1.48
NUP54-204ENST00000506098 SNRPGP15A8MWD9 76 aa5.8□□□□□ -1.48
NUP54-204ENST00000506098 H0Y8G0 127 aa5.8□□□□□ -1.48
NUP54-204ENST00000506098 H0YJW9 148 aa5.8□□□□□ -1.48
NUP54-204ENST00000506098 TNFSF12O43508 249 aa5.8□□□□□ -1.48
NUP54-204ENST00000506098 DUS4LO95620 317 aaKnown RBP5.8□□□□□ -1.48
NUP54-204ENST00000506098 CDS2O95674 445 aa5.8□□□□□ -1.48
NUP54-204ENST00000506098 OR5AC1P0C628 307 aa5.8□□□□□ -1.48
NUP54-204ENST00000506098 RPA2P15927 270 aa5.8□□□□□ -1.48
NUP54-204ENST00000506098 CD1BP29016 333 aa5.8□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms