RNA–Protein interactions for RNA: ENST00000505804.1

TOPBP1-204, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 472 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-204ENST00000505804 IGHV3-64A0A075B6Q5 118 aa1.13□□□□□ -2.23
TOPBP1-204ENST00000505804 C1orf232A0A0U1RR37 186 aa1.13□□□□□ -2.23
TOPBP1-204ENST00000505804 TEX50A0A1B0GTY4 177 aa1.13□□□□□ -2.23
TOPBP1-204ENST00000505804 C5orf49A4QMS7 147 aa1.13□□□□□ -2.23
TOPBP1-204ENST00000505804 FABP12A6NFH5 140 aa1.13□□□□□ -2.23
TOPBP1-204ENST00000505804 ITGB1BP1O14713 200 aa1.13□□□□□ -2.23
TOPBP1-204ENST00000505804 KLRC4O43908 158 aa1.13□□□□□ -2.23
TOPBP1-204ENST00000505804 HPGDSO60760 199 aa1.13□□□□□ -2.23
TOPBP1-204ENST00000505804 OCMP0CE72 109 aaPredicted RBP1.13□□□□□ -2.23
TOPBP1-204ENST00000505804 CD40LGP29965 261 aa1.13□□□□□ -2.23
TOPBP1-204ENST00000505804 CA5AP35218 305 aa1.13□□□□□ -2.23
TOPBP1-204ENST00000505804 UBE2G2P60604 165 aa1.13□□□□□ -2.23
TOPBP1-204ENST00000505804 JOSD1Q15040 202 aaPredicted RBP1.13□□□□□ -2.23
TOPBP1-204ENST00000505804 TMEM42Q69YG0 159 aa1.13□□□□□ -2.23
TOPBP1-204ENST00000505804 PLEKHG7Q6ZR37 379 aa1.13□□□□□ -2.23
TOPBP1-204ENST00000505804 NAA40Q86UY6 237 aa1.13□□□□□ -2.23
TOPBP1-204ENST00000505804 OR1L8Q8NGR8 309 aa1.13□□□□□ -2.23
TOPBP1-204ENST00000505804 DDI1Q8WTU0 396 aa1.13□□□□□ -2.23
TOPBP1-204ENST00000505804 DNAJB3Q8WWF6 145 aa1.13□□□□□ -2.23
TOPBP1-204ENST00000505804 ANKRD36BP1Q96IX9 119 aa1.13□□□□□ -2.23
TOPBP1-204ENST00000505804 ARL5BQ96KC2 179 aa1.13□□□□□ -2.23
TOPBP1-204ENST00000505804 C7orf50Q9BRJ6 194 aaKnown RBP1.13□□□□□ -2.23
TOPBP1-204ENST00000505804 VCX3BQ9H321 246 aa1.13□□□□□ -2.23
TOPBP1-204ENST00000505804 PARVGQ9HBI0 331 aa1.13□□□□□ -2.23
TOPBP1-204ENST00000505804 RBM7Q9Y580 266 aaKnown RBP1.13□□□□□ -2.23
TOPBP1-204ENST00000505804 C9JCJ5 164 aa1.12□□□□□ -2.23
TOPBP1-204ENST00000505804 BIRC5O15392 142 aa1.12□□□□□ -2.23
TOPBP1-204ENST00000505804 ZNF737O75373 536 aa1.12□□□□□ -2.23
TOPBP1-204ENST00000505804 E2F6O75461 281 aa1.12□□□□□ -2.23
TOPBP1-204ENST00000505804 DEFA4P12838 97 aa1.12□□□□□ -2.23
TOPBP1-204ENST00000505804 UGT2B7P16662 529 aa1.12□□□□□ -2.23
TOPBP1-204ENST00000505804 GPX2P18283 190 aa1.12□□□□□ -2.23
TOPBP1-204ENST00000505804 ANP32AP39687 249 aaKnown RBP1.12□□□□□ -2.23
TOPBP1-204ENST00000505804 CD79BP40259 229 aa1.12□□□□□ -2.23
TOPBP1-204ENST00000505804 CXCR4P61073 352 aa1.12□□□□□ -2.23
TOPBP1-204ENST00000505804 HOXC5Q00444 222 aa1.12□□□□□ -2.23
TOPBP1-204ENST00000505804 RASSF6Q6ZTQ3 369 aa1.12□□□□□ -2.23
TOPBP1-204ENST00000505804 KTN1-AS1Q86SY8 53 aa1.12□□□□□ -2.23
TOPBP1-204ENST00000505804 GPHB5Q86YW7 130 aa1.12□□□□□ -2.23
TOPBP1-204ENST00000505804 RAB2BQ8WUD1 216 aa1.12□□□□□ -2.23
TOPBP1-204ENST00000505804 EEF1AKMT1Q8WVE0 214 aa1.12□□□□□ -2.23
TOPBP1-204ENST00000505804 DHRS9Q9BPW9 319 aa1.12□□□□□ -2.23
TOPBP1-204ENST00000505804 DERL2Q9GZP9 239 aa1.12□□□□□ -2.23
TOPBP1-204ENST00000505804 C8orf4Q9NR00 106 aa1.12□□□□□ -2.23
TOPBP1-204ENST00000505804 IMP3Q9NV31 184 aaKnown RBP1.12□□□□□ -2.23
TOPBP1-204ENST00000505804 NKIRAS1Q9NYS0 192 aa1.12□□□□□ -2.23
TOPBP1-204ENST00000505804 MALRD1Q5VYJ5 2156 aa1.11□□□□□ -2.23
TOPBP1-204ENST00000505804 GREB1Q4ZG55 1949 aa1.11□□□□□ -2.23
TOPBP1-204ENST00000505804 NIPSNAP2O75323 286 aa1.11□□□□□ -2.23
TOPBP1-204ENST00000505804 HIST1H1CP16403 213 aaKnown RBP1.11□□□□□ -2.23
TOPBP1-204ENST00000505804 TAS2R20P59543 309 aa1.11□□□□□ -2.23
TOPBP1-204ENST00000505804 FKBP1AP62942 108 aaKnown RBP1.11□□□□□ -2.23
TOPBP1-204ENST00000505804 MIAQ16674 131 aa1.11□□□□□ -2.23
TOPBP1-204ENST00000505804 PLPPR5Q32ZL2 321 aa1.11□□□□□ -2.23
TOPBP1-204ENST00000505804 LYZL1Q6UWQ5 148 aa1.11□□□□□ -2.23
TOPBP1-204ENST00000505804 SMIM19Q96E16 107 aa1.11□□□□□ -2.23
TOPBP1-204ENST00000505804 HSPB9Q9BQS6 159 aa1.11□□□□□ -2.23
TOPBP1-204ENST00000505804 V9GYY5 206 aaPredicted RBP1.11□□□□□ -2.23
TOPBP1-204ENST00000505804 PKD1L2Q7Z442 2459 aa1.1□□□□□ -2.23
TOPBP1-204ENST00000505804 A0A0A6YYH2 397 aa1.1□□□□□ -2.23
TOPBP1-204ENST00000505804 A6NJ64 397 aa1.1□□□□□ -2.23
TOPBP1-204ENST00000505804 HMSDA8MTL9 139 aa1.1□□□□□ -2.23
TOPBP1-204ENST00000505804 F5H768 121 aa1.1□□□□□ -2.23
TOPBP1-204ENST00000505804 COX7A2LO14548 114 aa1.1□□□□□ -2.23
TOPBP1-204ENST00000505804 AQP4P55087 323 aa1.1□□□□□ -2.23
TOPBP1-204ENST00000505804 FXYD7P58549 80 aa1.1□□□□□ -2.23
TOPBP1-204ENST00000505804 TPI1P60174 286 aa1.1□□□□□ -2.23
TOPBP1-204ENST00000505804 KRTAP10-4P60372 401 aaPredicted RBP1.1□□□□□ -2.23
TOPBP1-204ENST00000505804 AP1S1P61966 158 aa1.1□□□□□ -2.23
TOPBP1-204ENST00000505804 UBE2IP63279 158 aaKnown RBP1.1□□□□□ -2.23
TOPBP1-204ENST00000505804 SLC36A2Q495M3 483 aa1.1□□□□□ -2.23
TOPBP1-204ENST00000505804 CCDC122Q5T0U0 273 aa1.1□□□□□ -2.23
TOPBP1-204ENST00000505804 ZNF705AQ6ZN79 300 aaPredicted RBP1.1□□□□□ -2.23
TOPBP1-204ENST00000505804 UBL4BQ8N7F7 174 aa1.1□□□□□ -2.23
TOPBP1-204ENST00000505804 PACRGQ96M98 296 aaPredicted RBP1.1□□□□□ -2.23
TOPBP1-204ENST00000505804 IMMP2LQ96T52 175 aa1.1□□□□□ -2.23
TOPBP1-204ENST00000505804 CCL13Q99616 98 aa1.1□□□□□ -2.23
TOPBP1-204ENST00000505804 DOHHQ9BU89 302 aa1.1□□□□□ -2.23
TOPBP1-204ENST00000505804 DRC3Q9H069 523 aa1.1□□□□□ -2.23
TOPBP1-204ENST00000505804 UBAP1Q9NZ09 502 aa1.1□□□□□ -2.23
TOPBP1-204ENST00000505804 TIMM9Q9Y5J7 89 aa1.1□□□□□ -2.23
TOPBP1-204ENST00000505804 PCDH15Q96QU1 1955 aa1.1□□□□□ -2.23
TOPBP1-204ENST00000505804 MYO3BQ8WXR4 1341 aa1.1□□□□□ -2.23
TOPBP1-204ENST00000505804 FLG2Q5D862 2391 aaPredicted RBP1.1□□□□□ -2.23
TOPBP1-204ENST00000505804 FLT4P35916 1363 aa1.09□□□□□ -2.23
TOPBP1-204ENST00000505804 MAP3K5Q99683 1374 aa1.09□□□□□ -2.23
TOPBP1-204ENST00000505804 NUP160Q12769 1436 aa1.09□□□□□ -2.23
TOPBP1-204ENST00000505804 CACNA1AO00555 2505 aa1.09□□□□□ -2.23
TOPBP1-204ENST00000505804 TRBV6-5A0A0K0K1A5 114 aa1.09□□□□□ -2.23
TOPBP1-204ENST00000505804 COCHO43405 550 aa1.09□□□□□ -2.23
TOPBP1-204ENST00000505804 LGALS1P09382 135 aaKnown RBP1.09□□□□□ -2.23
TOPBP1-204ENST00000505804 PSMB8P28062 276 aa1.09□□□□□ -2.23
TOPBP1-204ENST00000505804 SLCO1A2P46721 670 aa1.09□□□□□ -2.23
TOPBP1-204ENST00000505804 LRRC75BQ2VPJ9 315 aa1.09□□□□□ -2.23
TOPBP1-204ENST00000505804 CDKL4Q5MAI5 379 aa1.09□□□□□ -2.23
TOPBP1-204ENST00000505804 PTRHD1Q6GMV3 140 aaKnown RBP1.09□□□□□ -2.23
TOPBP1-204ENST00000505804 FAM151BQ6UXP7 276 aa1.09□□□□□ -2.23
TOPBP1-204ENST00000505804 RNF133Q8WVZ7 376 aa1.09□□□□□ -2.23
TOPBP1-204ENST00000505804 TMA16Q96EY4 203 aaKnown RBP1.09□□□□□ -2.23
TOPBP1-204ENST00000505804 Q96M85 177 aa1.09□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms