RNA–Protein interactions for RNA: ENST00000505659.1

HMGB1P29-201, Transcript of high mobility group box 1 pseudogene 29, humanhuman

BASIC

Gene HMGB1P29, Length 499 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P29-201ENST00000505659 GMEB1Q9Y692 573 aa0.49□□□□□ -2.33
HMGB1P29-201ENST00000505659 STRCQ7RTU9 1775 aa0.48□□□□□ -2.33
HMGB1P29-201ENST00000505659 RAD50Q92878 1312 aa0.48□□□□□ -2.33
HMGB1P29-201ENST00000505659 A0A087WUU8 490 aa0.48□□□□□ -2.33
HMGB1P29-201ENST00000505659 IGKV2-40A0A087WW87 121 aaPredicted RBP0.48□□□□□ -2.33
HMGB1P29-201ENST00000505659 A0A0J9YW62 118 aa0.48□□□□□ -2.33
HMGB1P29-201ENST00000505659 HMSDA8MTL9 139 aa0.48□□□□□ -2.33
HMGB1P29-201ENST00000505659 ZNF705FA8MVS1 300 aaPredicted RBP0.48□□□□□ -2.33
HMGB1P29-201ENST00000505659 C9JCJ5 164 aa0.48□□□□□ -2.33
HMGB1P29-201ENST00000505659 M0QX08 132 aa0.48□□□□□ -2.33
HMGB1P29-201ENST00000505659 AZIN1O14977 448 aa0.48□□□□□ -2.33
HMGB1P29-201ENST00000505659 SSNA1O43805 119 aa0.48□□□□□ -2.33
HMGB1P29-201ENST00000505659 CALUO43852 315 aaPredicted RBP0.48□□□□□ -2.33
HMGB1P29-201ENST00000505659 IGKV2D-40P01614 121 aaPredicted RBP0.48□□□□□ -2.33
HMGB1P29-201ENST00000505659 C1QCP02747 245 aa0.48□□□□□ -2.33
HMGB1P29-201ENST00000505659 HLA-DQB2P05538 268 aa0.48□□□□□ -2.33
HMGB1P29-201ENST00000505659 SERPINA7P05543 415 aa0.48□□□□□ -2.33
HMGB1P29-201ENST00000505659 CXCL2P19875 107 aa0.48□□□□□ -2.33
HMGB1P29-201ENST00000505659 CXCL3P19876 107 aa0.48□□□□□ -2.33
HMGB1P29-201ENST00000505659 PSMB6P28072 239 aa0.48□□□□□ -2.33
HMGB1P29-201ENST00000505659 IFNGR2P38484 337 aa0.48□□□□□ -2.33
HMGB1P29-201ENST00000505659 SLCO1A2P46721 670 aa0.48□□□□□ -2.33
HMGB1P29-201ENST00000505659 HAAOP46952 286 aa0.48□□□□□ -2.33
HMGB1P29-201ENST00000505659 TPI1P60174 286 aa0.48□□□□□ -2.33
HMGB1P29-201ENST00000505659 RPS24P62847 133 aaKnown RBP0.48□□□□□ -2.33
HMGB1P29-201ENST00000505659 HLA-DRB3P79483 266 aa0.48□□□□□ -2.33
HMGB1P29-201ENST00000505659 MIAQ16674 131 aa0.48□□□□□ -2.33
HMGB1P29-201ENST00000505659 C4orf26Q17RF5 130 aa0.48□□□□□ -2.33
HMGB1P29-201ENST00000505659 LGALS9BQ3B8N2 356 aa0.48□□□□□ -2.33
HMGB1P29-201ENST00000505659 C9orf64Q5T6V5 341 aa0.48□□□□□ -2.33
HMGB1P29-201ENST00000505659 TNFAIP8L2Q6P589 184 aaPredicted RBP0.48□□□□□ -2.33
HMGB1P29-201ENST00000505659 C5orf46Q6UWT4 87 aa0.48□□□□□ -2.33
HMGB1P29-201ENST00000505659 FAM19A5Q7Z5A7 132 aaPredicted RBP0.48□□□□□ -2.33
HMGB1P29-201ENST00000505659 SPATA12Q7Z6I5 190 aa0.48□□□□□ -2.33
HMGB1P29-201ENST00000505659 KTN1-AS1Q86SY8 53 aa0.48□□□□□ -2.33
HMGB1P29-201ENST00000505659 SLC51BQ86UW2 128 aa0.48□□□□□ -2.33
HMGB1P29-201ENST00000505659 FAM9CQ8IZT9 166 aa0.48□□□□□ -2.33
HMGB1P29-201ENST00000505659 TMEM86AQ8N2M4 240 aa0.48□□□□□ -2.33
HMGB1P29-201ENST00000505659 Q8N402 240 aa0.48□□□□□ -2.33
HMGB1P29-201ENST00000505659 ZNF675Q8TD23 568 aa0.48□□□□□ -2.33
HMGB1P29-201ENST00000505659 ASB17Q8WXJ9 295 aa0.48□□□□□ -2.33
HMGB1P29-201ENST00000505659 ASB13Q8WXK3 278 aa0.48□□□□□ -2.33
HMGB1P29-201ENST00000505659 SMIM19Q96E16 107 aa0.48□□□□□ -2.33
HMGB1P29-201ENST00000505659 NMNAT3Q96T66 252 aa0.48□□□□□ -2.33
HMGB1P29-201ENST00000505659 C7orf50Q9BRJ6 194 aaKnown RBP0.48□□□□□ -2.33
HMGB1P29-201ENST00000505659 CYSTM1Q9H1C7 97 aa0.48□□□□□ -2.33
HMGB1P29-201ENST00000505659 WDR54Q9H977 334 aa0.48□□□□□ -2.33
HMGB1P29-201ENST00000505659 XAGE1AQ9HD64 81 aa0.48□□□□□ -2.33
HMGB1P29-201ENST00000505659 FKBP14Q9NWM8 211 aa0.48□□□□□ -2.33
HMGB1P29-201ENST00000505659 SOX21Q9Y651 276 aaPredicted RBP0.48□□□□□ -2.33
HMGB1P29-201ENST00000505659 ROS1P08922 2347 aa0.47□□□□□ -2.33
HMGB1P29-201ENST00000505659 TRAV38-1A0A0B4J264 116 aa0.47□□□□□ -2.33
HMGB1P29-201ENST00000505659 MDFIC2A0A1B0GVS7 189 aa0.47□□□□□ -2.33
HMGB1P29-201ENST00000505659 DISC1C4P0D8 188 aa0.47□□□□□ -2.33
HMGB1P29-201ENST00000505659 BIRC5O15392 142 aa0.47□□□□□ -2.33
HMGB1P29-201ENST00000505659 ATP8B1O43520 1251 aa0.47□□□□□ -2.33
HMGB1P29-201ENST00000505659 NDUFS6O75380 124 aaKnown RBP0.47□□□□□ -2.33
HMGB1P29-201ENST00000505659 APOMO95445 188 aa0.47□□□□□ -2.33
HMGB1P29-201ENST00000505659 YEATS4O95619 227 aa0.47□□□□□ -2.33
HMGB1P29-201ENST00000505659 KRT75O95678 551 aa0.47□□□□□ -2.33
HMGB1P29-201ENST00000505659 APOEP02649 317 aa0.47□□□□□ -2.33
HMGB1P29-201ENST00000505659 ZNF705DP0CH99 300 aaPredicted RBP0.47□□□□□ -2.33
HMGB1P29-201ENST00000505659 ZNF705BP0CI00 300 aaPredicted RBP0.47□□□□□ -2.33
HMGB1P29-201ENST00000505659 UGT2B7P16662 529 aa0.47□□□□□ -2.33
HMGB1P29-201ENST00000505659 GPX2P18283 190 aa0.47□□□□□ -2.33
HMGB1P29-201ENST00000505659 CCR7P32248 378 aa0.47□□□□□ -2.33
HMGB1P29-201ENST00000505659 CCR2P41597 374 aa0.47□□□□□ -2.33
HMGB1P29-201ENST00000505659 EVX1P49640 407 aa0.47□□□□□ -2.33
HMGB1P29-201ENST00000505659 CXCR4P61073 352 aa0.47□□□□□ -2.33
HMGB1P29-201ENST00000505659 MGAT3Q09327 533 aa0.47□□□□□ -2.33
HMGB1P29-201ENST00000505659 MED21Q13503 144 aa0.47□□□□□ -2.33
HMGB1P29-201ENST00000505659 NNATQ16517 81 aa0.47□□□□□ -2.33
HMGB1P29-201ENST00000505659 BATFQ16520 125 aa0.47□□□□□ -2.33
HMGB1P29-201ENST00000505659 ZNF791Q3KP31 576 aaPredicted RBP0.47□□□□□ -2.33
HMGB1P29-201ENST00000505659 FAM78BQ5VT40 261 aa0.47□□□□□ -2.33
HMGB1P29-201ENST00000505659 ZNF705AQ6ZN79 300 aaPredicted RBP0.47□□□□□ -2.33
HMGB1P29-201ENST00000505659 RASSF6Q6ZTQ3 369 aa0.47□□□□□ -2.33
HMGB1P29-201ENST00000505659 FUNDC1Q8IVP5 155 aa0.47□□□□□ -2.33
HMGB1P29-201ENST00000505659 TMEM251Q8N6I4 163 aa0.47□□□□□ -2.33
HMGB1P29-201ENST00000505659 UBL4BQ8N7F7 174 aa0.47□□□□□ -2.33
HMGB1P29-201ENST00000505659 OR51T1Q8NGJ9 327 aa0.47□□□□□ -2.33
HMGB1P29-201ENST00000505659 OR1L8Q8NGR8 309 aa0.47□□□□□ -2.33
HMGB1P29-201ENST00000505659 HAVCR2Q8TDQ0 301 aa0.47□□□□□ -2.33
HMGB1P29-201ENST00000505659 RAB2BQ8WUD1 216 aa0.47□□□□□ -2.33
HMGB1P29-201ENST00000505659 MBD3L1Q8WWY6 194 aa0.47□□□□□ -2.33
HMGB1P29-201ENST00000505659 SFRP2Q96HF1 295 aa0.47□□□□□ -2.33
HMGB1P29-201ENST00000505659 KCTD7Q96MP8 289 aa0.47□□□□□ -2.33
HMGB1P29-201ENST00000505659 CCL13Q99616 98 aa0.47□□□□□ -2.33
HMGB1P29-201ENST00000505659 BBS2Q9BXC9 721 aa0.47□□□□□ -2.33
HMGB1P29-201ENST00000505659 MS4A6AQ9H2W1 248 aa0.47□□□□□ -2.33
HMGB1P29-201ENST00000505659 VCX3BQ9H321 246 aa0.47□□□□□ -2.33
HMGB1P29-201ENST00000505659 MED9Q9NWA0 146 aa0.47□□□□□ -2.33
HMGB1P29-201ENST00000505659 EURLQ9NYK6 297 aa0.47□□□□□ -2.33
HMGB1P29-201ENST00000505659 POLR1DQ9Y2S0 133 aa0.47□□□□□ -2.33
HMGB1P29-201ENST00000505659 BAZ2BQ9UIF8 2168 aaKnown RBP0.47□□□□□ -2.33
HMGB1P29-201ENST00000505659 MED12LQ86YW9 2145 aa0.47□□□□□ -2.33
HMGB1P29-201ENST00000505659 TRAV7A0A075B6U4 112 aa0.46□□□□□ -2.34
HMGB1P29-201ENST00000505659 A0A0A6YYH2 397 aa0.46□□□□□ -2.34
HMGB1P29-201ENST00000505659 IGHV1-18A0A0C4DH31 117 aa0.46□□□□□ -2.34
HMGB1P29-201ENST00000505659 IGKV3D-7A0A0C4DH55 119 aa0.46□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms