RNA–Protein interactions for RNA: ENST00000504687.5

LMNA-220, Transcript of lamin A/C, humanhuman

TSL 4

Gene LMNA, Length 546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-220ENST00000504687 MAGT1Q9H0U3 335 aa10.81□□□□□ -0.68
LMNA-220ENST00000504687 BET1LQ9NYM9 111 aa10.81□□□□□ -0.68
LMNA-220ENST00000504687 FOXA2Q9Y261 457 aaPredicted RBP10.81□□□□□ -0.68
LMNA-220ENST00000504687 ZNF257Q9Y2Q1 563 aa10.81□□□□□ -0.68
LMNA-220ENST00000504687 HELZ2Q9BYK8 2649 aaKnown RBP10.81□□□□□ -0.68
LMNA-220ENST00000504687 FAM24AA6NFZ4 105 aa10.8□□□□□ -0.68
LMNA-220ENST00000504687 LY6LH3BQJ8 138 aa10.8□□□□□ -0.68
LMNA-220ENST00000504687 BUB1B-PAK6H3BSN5 160 aa10.8□□□□□ -0.68
LMNA-220ENST00000504687 FGF16O43320 207 aa10.8□□□□□ -0.68
LMNA-220ENST00000504687 CRYZL1O95825 349 aa10.8□□□□□ -0.68
LMNA-220ENST00000504687 OR9G9P0C7N8 305 aa10.8□□□□□ -0.68
LMNA-220ENST00000504687 SEC11BP0C7V7 166 aa10.8□□□□□ -0.68
LMNA-220ENST00000504687 COX6B1P14854 86 aa10.8□□□□□ -0.68
LMNA-220ENST00000504687 S100A1P23297 94 aa10.8□□□□□ -0.68
LMNA-220ENST00000504687 CAV2P51636 162 aa10.8□□□□□ -0.68
LMNA-220ENST00000504687 LMO4P61968 165 aa10.8□□□□□ -0.68
LMNA-220ENST00000504687 NHLH2Q02577 135 aa10.8□□□□□ -0.68
LMNA-220ENST00000504687 RPL7L1Q6DKI1 246 aaKnown RBP10.8□□□□□ -0.68
LMNA-220ENST00000504687 TMEM14EPQ6UXP3 125 aa10.8□□□□□ -0.68
LMNA-220ENST00000504687 STX12Q86Y82 276 aa10.8□□□□□ -0.68
LMNA-220ENST00000504687 TGIF2LXQ8IUE1 241 aa10.8□□□□□ -0.68
LMNA-220ENST00000504687 OR4A5Q8NH83 315 aa10.8□□□□□ -0.68
LMNA-220ENST00000504687 MRPL20Q9BYC9 149 aaKnown RBP10.8□□□□□ -0.68
LMNA-220ENST00000504687 PARD6GQ9BYG4 376 aaPredicted RBP10.8□□□□□ -0.68
LMNA-220ENST00000504687 RBKSQ9H477 322 aa10.8□□□□□ -0.68
LMNA-220ENST00000504687 TMEM14BQ9NUH8 114 aa10.8□□□□□ -0.68
LMNA-220ENST00000504687 TMEM140Q9NV12 185 aa10.8□□□□□ -0.68
LMNA-220ENST00000504687 MALRD1Q5VYJ5 2156 aa10.8□□□□□ -0.68
LMNA-220ENST00000504687 UBR5O95071 2799 aaPredicted RBP10.8□□□□□ -0.68
LMNA-220ENST00000504687 MYO18BQ8IUG5 2567 aa10.79□□□□□ -0.68
LMNA-220ENST00000504687 C15orf61A6NNL5 157 aa10.79□□□□□ -0.68
LMNA-220ENST00000504687 VWC2LB2RUY7 222 aa10.79□□□□□ -0.68
LMNA-220ENST00000504687 DFFBO76075 338 aa10.79□□□□□ -0.68
LMNA-220ENST00000504687 DSCR9P59020 149 aa10.79□□□□□ -0.68
LMNA-220ENST00000504687 SP5Q6BEB4 398 aaPredicted RBP10.79□□□□□ -0.68
LMNA-220ENST00000504687 OR4A47Q6IF82 309 aa10.79□□□□□ -0.68
LMNA-220ENST00000504687 SLC7A5P1Q8MH63 180 aa10.79□□□□□ -0.68
LMNA-220ENST00000504687 OR4C13Q8NGP0 309 aa10.79□□□□□ -0.68
LMNA-220ENST00000504687 OR4A16Q8NH70 328 aa10.79□□□□□ -0.68
LMNA-220ENST00000504687 RNF5Q99942 180 aa10.79□□□□□ -0.68
LMNA-220ENST00000504687 FKBP11Q9NYL4 201 aa10.79□□□□□ -0.68
LMNA-220ENST00000504687 PSENENQ9NZ42 101 aa10.79□□□□□ -0.68
LMNA-220ENST00000504687 PRNDQ9UKY0 176 aa10.79□□□□□ -0.68
LMNA-220ENST00000504687 WASHC3Q9Y3C0 194 aa10.79□□□□□ -0.68
LMNA-220ENST00000504687 FLNCQ14315 2725 aa10.78□□□□□ -0.68
LMNA-220ENST00000504687 ODF3BA8MYP8 253 aa10.78□□□□□ -0.68
LMNA-220ENST00000504687 OOSP1A8MZH6 123 aa10.78□□□□□ -0.68
LMNA-220ENST00000504687 INS-IGF2F8WCM5 200 aa10.78□□□□□ -0.68
LMNA-220ENST00000504687 UPK2O00526 184 aa10.78□□□□□ -0.68
LMNA-220ENST00000504687 FOXH1O75593 365 aa10.78□□□□□ -0.68
LMNA-220ENST00000504687 ARG1P05089 322 aa10.78□□□□□ -0.68
LMNA-220ENST00000504687 SPP1P10451 314 aa10.78□□□□□ -0.68
LMNA-220ENST00000504687 LGALS7P47929 136 aa10.78□□□□□ -0.68
LMNA-220ENST00000504687 ATP5IP56385 69 aaPredicted RBP10.78□□□□□ -0.68
LMNA-220ENST00000504687 HBG1P69891 147 aa10.78□□□□□ -0.68
LMNA-220ENST00000504687 HBG2P69892 147 aa10.78□□□□□ -0.68
LMNA-220ENST00000504687 PDZD9Q8IXQ8 264 aa10.78□□□□□ -0.68
LMNA-220ENST00000504687 ZNF525Q8N782 197 aa10.78□□□□□ -0.68
LMNA-220ENST00000504687 OR4P4Q8NGL7 312 aa10.78□□□□□ -0.68
LMNA-220ENST00000504687 OR1S2Q8NGQ3 325 aa10.78□□□□□ -0.68
LMNA-220ENST00000504687 VSTM2AQ8TAG5 236 aa10.78□□□□□ -0.68
LMNA-220ENST00000504687 DTD1Q8TEA8 209 aa10.78□□□□□ -0.68
LMNA-220ENST00000504687 C10orf105Q8TEF2 133 aa10.78□□□□□ -0.68
LMNA-220ENST00000504687 RNF141Q8WVD5 230 aa10.78□□□□□ -0.68
LMNA-220ENST00000504687 LHX4Q969G2 390 aa10.78□□□□□ -0.68
LMNA-220ENST00000504687 FLYWCH2Q96CP2 140 aaKnown RBP10.78□□□□□ -0.68
LMNA-220ENST00000504687 SAT2Q96F10 170 aaPredicted RBP10.78□□□□□ -0.68
LMNA-220ENST00000504687 BSCL2Q96G97 398 aaPredicted RBP10.78□□□□□ -0.68
LMNA-220ENST00000504687 BPESC1Q9GZL8 116 aa10.78□□□□□ -0.68
LMNA-220ENST00000504687 WFDC1Q9HC57 220 aa10.78□□□□□ -0.68
LMNA-220ENST00000504687 ZNRD1Q9P1U0 126 aa10.78□□□□□ -0.68
LMNA-220ENST00000504687 USP9XQ93008 2570 aaPredicted RBP10.78□□□□□ -0.68
LMNA-220ENST00000504687 IGHV2-70DA0A0C4DH43 119 aa10.77□□□□□ -0.69
LMNA-220ENST00000504687 IGKV1-16P04430 117 aa10.77□□□□□ -0.69
LMNA-220ENST00000504687 OR8U8P0C7N1 319 aa10.77□□□□□ -0.69
LMNA-220ENST00000504687 FAM157CP0CG43 387 aa10.77□□□□□ -0.69
LMNA-220ENST00000504687 SULT1A2P50226 295 aa10.77□□□□□ -0.69
LMNA-220ENST00000504687 HSPE1P61604 102 aaKnown RBP10.77□□□□□ -0.69
LMNA-220ENST00000504687 RPP30P78346 268 aaKnown RBP10.77□□□□□ -0.69
LMNA-220ENST00000504687 HABP2Q14520 560 aaPredicted RBP10.77□□□□□ -0.69
LMNA-220ENST00000504687 ATP6V1FQ16864 119 aa10.77□□□□□ -0.69
LMNA-220ENST00000504687 OR5C1Q8NGR4 320 aa10.77□□□□□ -0.69
LMNA-220ENST00000504687 CLDND2Q8NHS1 167 aa10.77□□□□□ -0.69
LMNA-220ENST00000504687 ATP5SQ99766 215 aa10.77□□□□□ -0.69
LMNA-220ENST00000504687 PIMREGQ9BSJ6 248 aa10.77□□□□□ -0.69
LMNA-220ENST00000504687 QTRT1Q9BXR0 403 aaKnown RBP10.77□□□□□ -0.69
LMNA-220ENST00000504687 SIRPDQ9H106 197 aa10.77□□□□□ -0.69
LMNA-220ENST00000504687 ONECUT1Q9UBC0 465 aa10.77□□□□□ -0.69
LMNA-220ENST00000504687 TENM4Q6N022 2769 aa10.77□□□□□ -0.69
LMNA-220ENST00000504687 SRRM4A7MD48 611 aaKnown RBP10.76□□□□□ -0.69
LMNA-220ENST00000504687 PMS2P5A8MQ11 134 aa10.76□□□□□ -0.69
LMNA-220ENST00000504687 LEUTXA8MZ59 168 aa10.76□□□□□ -0.69
LMNA-220ENST00000504687 USF1P22415 310 aaPredicted RBP10.76□□□□□ -0.69
LMNA-220ENST00000504687 ZFP36P26651 326 aaKnown RBP10.76□□□□□ -0.69
LMNA-220ENST00000504687 CEACAM3P40198 252 aa10.76□□□□□ -0.69
LMNA-220ENST00000504687 VDAC2P45880 294 aaPredicted RBP10.76□□□□□ -0.69
LMNA-220ENST00000504687 RAB5CP51148 216 aa10.76□□□□□ -0.69
LMNA-220ENST00000504687 DYNLT3P51808 116 aa10.76□□□□□ -0.69
LMNA-220ENST00000504687 MINOS1Q5TGZ0 78 aa10.76□□□□□ -0.69
LMNA-220ENST00000504687 HCP5Q6MZN7 132 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms