RNA–Protein interactions for RNA: ENST00000504195.1

HMGB3P17-201, Transcript of high mobility group box 3 pseudogene 17, humanhuman

BASIC

Gene HMGB3P17, Length 649 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P17-201ENST00000504195 PRNDQ9UKY0 176 aa1.57□□□□□ -2.16
HMGB3P17-201ENST00000504195 TNFSF18Q9UNG2 199 aa1.57□□□□□ -2.16
HMGB3P17-201ENST00000504195 POLR1DQ9Y2S0 133 aa1.57□□□□□ -2.16
HMGB3P17-201ENST00000504195 YTHDF2Q9Y5A9 579 aaKnown RBP1.57□□□□□ -2.16
HMGB3P17-201ENST00000504195 ZNF780BQ9Y6R6 833 aa1.57□□□□□ -2.16
HMGB3P17-201ENST00000504195 DNMT1P26358 1616 aaKnown RBP1.57□□□□□ -2.16
HMGB3P17-201ENST00000504195 ALKQ9UM73 1620 aa1.57□□□□□ -2.16
HMGB3P17-201ENST00000504195 ARAP2Q8WZ64 1704 aa1.57□□□□□ -2.16
HMGB3P17-201ENST00000504195 PEAK1Q9H792 1746 aa1.57□□□□□ -2.16
HMGB3P17-201ENST00000504195 FER1L5A0AVI2 2057 aa1.57□□□□□ -2.16
HMGB3P17-201ENST00000504195 RGPD8O14715 1765 aaPredicted RBP1.57□□□□□ -2.16
HMGB3P17-201ENST00000504195 RGPD5Q99666 1765 aa1.57□□□□□ -2.16
HMGB3P17-201ENST00000504195 FOCADQ5VW36 1801 aa1.56□□□□□ -2.16
HMGB3P17-201ENST00000504195 SBF1O95248 1867 aa1.56□□□□□ -2.16
HMGB3P17-201ENST00000504195 NUP210LQ5VU65 1888 aa1.56□□□□□ -2.16
HMGB3P17-201ENST00000504195 MEGF6O75095 1541 aa1.56□□□□□ -2.16
HMGB3P17-201ENST00000504195 DIP2BQ9P265 1576 aa1.56□□□□□ -2.16
HMGB3P17-201ENST00000504195 CLTCQ00610 1675 aaKnown RBP1.56□□□□□ -2.16
HMGB3P17-201ENST00000504195 TRBV24-1A0A075B6N3 115 aa1.56□□□□□ -2.16
HMGB3P17-201ENST00000504195 IGHV2-26A0A0B4J1V2 119 aa1.56□□□□□ -2.16
HMGB3P17-201ENST00000504195 SMIM28A0A1B0GU29 152 aa1.56□□□□□ -2.16
HMGB3P17-201ENST00000504195 TMEM212A6NML5 194 aa1.56□□□□□ -2.16
HMGB3P17-201ENST00000504195 CEACAM18A8MTB9 384 aa1.56□□□□□ -2.16
HMGB3P17-201ENST00000504195 ZNF705GA8MUZ8 300 aaPredicted RBP1.56□□□□□ -2.16
HMGB3P17-201ENST00000504195 FAM220BPB1ANY3 271 aa1.56□□□□□ -2.16
HMGB3P17-201ENST00000504195 C2CD4DB7Z1M9 353 aa1.56□□□□□ -2.16
HMGB3P17-201ENST00000504195 C9JAW5 83 aa1.56□□□□□ -2.16
HMGB3P17-201ENST00000504195 TMEM262E9PQX1 116 aa1.56□□□□□ -2.16
HMGB3P17-201ENST00000504195 LMO7DNF2Z398 122 aa1.56□□□□□ -2.16
HMGB3P17-201ENST00000504195 F8VVB4 439 aa1.56□□□□□ -2.16
HMGB3P17-201ENST00000504195 F8VWA3 439 aa1.56□□□□□ -2.16
HMGB3P17-201ENST00000504195 F8W1H4 67 aa1.56□□□□□ -2.16
HMGB3P17-201ENST00000504195 G3V2L1 256 aa1.56□□□□□ -2.16
HMGB3P17-201ENST00000504195 H0YJW9 148 aa1.56□□□□□ -2.16
HMGB3P17-201ENST00000504195 HSD17B6O14756 317 aa1.56□□□□□ -2.16
HMGB3P17-201ENST00000504195 RER1O15258 196 aa1.56□□□□□ -2.16
HMGB3P17-201ENST00000504195 PLA2G10O15496 165 aa1.56□□□□□ -2.16
HMGB3P17-201ENST00000504195 TNFSF12O43508 249 aa1.56□□□□□ -2.16
HMGB3P17-201ENST00000504195 CD5LO43866 347 aa1.56□□□□□ -2.16
HMGB3P17-201ENST00000504195 ZNF354AO60765 605 aaPredicted RBP1.56□□□□□ -2.16
HMGB3P17-201ENST00000504195 REM1O75628 298 aa1.56□□□□□ -2.16
HMGB3P17-201ENST00000504195 DIRAS1O95057 198 aa1.56□□□□□ -2.16
HMGB3P17-201ENST00000504195 NDUFC2O95298 119 aa1.56□□□□□ -2.16
HMGB3P17-201ENST00000504195 IGHG1P01857 330 aa1.56□□□□□ -2.16
HMGB3P17-201ENST00000504195 HLA-DRB1P01911 266 aa1.56□□□□□ -2.16
HMGB3P17-201ENST00000504195 HBE1P02100 147 aa1.56□□□□□ -2.16
HMGB3P17-201ENST00000504195 IL5P05113 134 aa1.56□□□□□ -2.16
HMGB3P17-201ENST00000504195 REG1AP05451 166 aa1.56□□□□□ -2.16
HMGB3P17-201ENST00000504195 ATP5G1P05496 136 aa1.56□□□□□ -2.16
HMGB3P17-201ENST00000504195 HPNP05981 417 aa1.56□□□□□ -2.16
HMGB3P17-201ENST00000504195 SLC35G6P0C7Q6 338 aa1.56□□□□□ -2.16
HMGB3P17-201ENST00000504195 SP9P0CG40 484 aa1.56□□□□□ -2.16
HMGB3P17-201ENST00000504195 CD1DP15813 335 aa1.56□□□□□ -2.16
HMGB3P17-201ENST00000504195 IGFBP3P17936 291 aaPredicted RBP1.56□□□□□ -2.16
HMGB3P17-201ENST00000504195 BCL3P20749 454 aa1.56□□□□□ -2.16
HMGB3P17-201ENST00000504195 CRYBB3P26998 211 aa1.56□□□□□ -2.16
HMGB3P17-201ENST00000504195 POLR2IP36954 125 aaKnown RBP1.56□□□□□ -2.16
HMGB3P17-201ENST00000504195 NBL1P41271 181 aa1.56□□□□□ -2.16
HMGB3P17-201ENST00000504195 ATP5G3P48201 142 aa1.56□□□□□ -2.16
HMGB3P17-201ENST00000504195 INPP1P49441 399 aa1.56□□□□□ -2.16
HMGB3P17-201ENST00000504195 GSK3BP49841 420 aa1.56□□□□□ -2.16
HMGB3P17-201ENST00000504195 GZMMP51124 257 aa1.56□□□□□ -2.16
HMGB3P17-201ENST00000504195 DIO3P55073 304 aa1.56□□□□□ -2.16
HMGB3P17-201ENST00000504195 DLX1P56177 255 aa1.56□□□□□ -2.16
HMGB3P17-201ENST00000504195 CLDN15P56746 228 aa1.56□□□□□ -2.16
HMGB3P17-201ENST00000504195 TAS2R46P59540 309 aa1.56□□□□□ -2.16
HMGB3P17-201ENST00000504195 SEC11AP67812 179 aa1.56□□□□□ -2.16
HMGB3P17-201ENST00000504195 FKBP1BP68106 108 aa1.56□□□□□ -2.16
HMGB3P17-201ENST00000504195 ATP5G2Q06055 141 aa1.56□□□□□ -2.16
HMGB3P17-201ENST00000504195 TAF10Q12962 218 aa1.56□□□□□ -2.16
HMGB3P17-201ENST00000504195 KLRD1Q13241 179 aa1.56□□□□□ -2.16
HMGB3P17-201ENST00000504195 HES1Q14469 280 aa1.56□□□□□ -2.16
HMGB3P17-201ENST00000504195 ZNF266Q14584 549 aa1.56□□□□□ -2.16
HMGB3P17-201ENST00000504195 CLINT1Q14677 625 aa1.56□□□□□ -2.16
HMGB3P17-201ENST00000504195 ATXN7L3Q14CW9 347 aaPredicted RBP1.56□□□□□ -2.16
HMGB3P17-201ENST00000504195 GUSBP1Q15486 140 aa1.56□□□□□ -2.16
HMGB3P17-201ENST00000504195 ZNF79Q15937 498 aa1.56□□□□□ -2.16
HMGB3P17-201ENST00000504195 BATFQ16520 125 aa1.56□□□□□ -2.16
HMGB3P17-201ENST00000504195 UBE2SQ16763 222 aa1.56□□□□□ -2.16
HMGB3P17-201ENST00000504195 TP53I3Q53FA7 332 aa1.56□□□□□ -2.16
HMGB3P17-201ENST00000504195 GLYATL3Q5SZD4 288 aa1.56□□□□□ -2.16
HMGB3P17-201ENST00000504195 BCL2L15Q5TBC7 163 aa1.56□□□□□ -2.16
HMGB3P17-201ENST00000504195 TMEM215Q68D42 235 aa1.56□□□□□ -2.16
HMGB3P17-201ENST00000504195 OR2T2Q6IF00 324 aa1.56□□□□□ -2.16
HMGB3P17-201ENST00000504195 LCN8Q6JVE9 175 aa1.56□□□□□ -2.16
HMGB3P17-201ENST00000504195 SFXN4Q6P4A7 337 aa1.56□□□□□ -2.16
HMGB3P17-201ENST00000504195 LEG1Q6P5S2 330 aa1.56□□□□□ -2.16
HMGB3P17-201ENST00000504195 MORN3Q6PF18 240 aaPredicted RBP1.56□□□□□ -2.16
HMGB3P17-201ENST00000504195 CNIH2Q6PI25 160 aa1.56□□□□□ -2.16
HMGB3P17-201ENST00000504195 DUX4L9Q6RFH8 374 aaPredicted RBP1.56□□□□□ -2.16
HMGB3P17-201ENST00000504195 GLIPR1L1Q6UWM5 242 aa1.56□□□□□ -2.16
HMGB3P17-201ENST00000504195 ALKAL2Q6UX46 152 aa1.56□□□□□ -2.16
HMGB3P17-201ENST00000504195 Q6ZSR3 168 aa1.56□□□□□ -2.16
HMGB3P17-201ENST00000504195 FAM231DQ6ZW35 169 aa1.56□□□□□ -2.16
HMGB3P17-201ENST00000504195 DEFB107AQ8IZN7 70 aa1.56□□□□□ -2.16
HMGB3P17-201ENST00000504195 ZNF567Q8N184 647 aa1.56□□□□□ -2.16
HMGB3P17-201ENST00000504195 TEX29Q8N6K0 151 aa1.56□□□□□ -2.16
HMGB3P17-201ENST00000504195 PRELID2Q8N945 189 aa1.56□□□□□ -2.16
HMGB3P17-201ENST00000504195 SUMF1Q8NBK3 374 aa1.56□□□□□ -2.16
HMGB3P17-201ENST00000504195 GPR26Q8NDV2 337 aa1.56□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms