RNA–Protein interactions for RNA: ENST00000503827.5

PDLIM7-210, Transcript of PDZ and LIM domain 7, humanhuman

TSL 5

Gene PDLIM7, Length 451 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-210ENST00000503827 UFC1Q9Y3C8 167 aa11.61□□□□□ -0.55
PDLIM7-210ENST00000503827 S4R3C0 116 aa11.61□□□□□ -0.55
PDLIM7-210ENST00000503827 DPPA5A6NC42 116 aa11.6□□□□□ -0.55
PDLIM7-210ENST00000503827 ALPLP05186 524 aa11.6□□□□□ -0.55
PDLIM7-210ENST00000503827 MYOD1P15172 320 aa11.6□□□□□ -0.55
PDLIM7-210ENST00000503827 ETV1P50549 477 aa11.6□□□□□ -0.55
PDLIM7-210ENST00000503827 ELLP55199 621 aaPredicted RBP11.6□□□□□ -0.55
PDLIM7-210ENST00000503827 C10orf55Q5SWW7 151 aa11.6□□□□□ -0.55
PDLIM7-210ENST00000503827 LAMTOR1Q6IAA8 161 aa11.6□□□□□ -0.55
PDLIM7-210ENST00000503827 OR10K2Q6IF99 312 aa11.6□□□□□ -0.55
PDLIM7-210ENST00000503827 UNQ9165/PRO28630Q6UXU0 137 aa11.6□□□□□ -0.55
PDLIM7-210ENST00000503827 NR2C2APQ86WQ0 139 aa11.6□□□□□ -0.55
PDLIM7-210ENST00000503827 ZNF575Q86XF7 245 aa11.6□□□□□ -0.55
PDLIM7-210ENST00000503827 MMD2Q8IY49 270 aa11.6□□□□□ -0.55
PDLIM7-210ENST00000503827 SETD9Q8NE22 299 aa11.6□□□□□ -0.55
PDLIM7-210ENST00000503827 CD300LFQ8TDQ1 290 aa11.6□□□□□ -0.55
PDLIM7-210ENST00000503827 NICN1Q9BSH3 213 aa11.6□□□□□ -0.55
PDLIM7-210ENST00000503827 HDHD3Q9BSH5 251 aaPredicted RBP11.6□□□□□ -0.55
PDLIM7-210ENST00000503827 Q9N2K0 584 aa11.6□□□□□ -0.55
PDLIM7-210ENST00000503827 FGF20Q9NP95 211 aaPredicted RBP11.6□□□□□ -0.55
PDLIM7-210ENST00000503827 AK3Q9UIJ7 227 aa11.6□□□□□ -0.55
PDLIM7-210ENST00000503827 PKD1P98161 4303 aa11.59□□□□□ -0.55
PDLIM7-210ENST00000503827 OR4C46A6NHA9 309 aa11.59□□□□□ -0.55
PDLIM7-210ENST00000503827 HMX3A6NHT5 357 aa11.59□□□□□ -0.55
PDLIM7-210ENST00000503827 DEFB4AO15263 64 aa11.59□□□□□ -0.55
PDLIM7-210ENST00000503827 S1PR2O95136 353 aa11.59□□□□□ -0.55
PDLIM7-210ENST00000503827 CRYZL1O95825 349 aa11.59□□□□□ -0.55
PDLIM7-210ENST00000503827 ADMP35318 185 aa11.59□□□□□ -0.55
PDLIM7-210ENST00000503827 CDK10Q15131 360 aa11.59□□□□□ -0.55
PDLIM7-210ENST00000503827 CEACAM19Q7Z692 300 aa11.59□□□□□ -0.55
PDLIM7-210ENST00000503827 CCDC197Q8NCU1 140 aa11.59□□□□□ -0.55
PDLIM7-210ENST00000503827 OR4A5Q8NH83 315 aa11.59□□□□□ -0.55
PDLIM7-210ENST00000503827 RHOXF1Q8NHV9 184 aa11.59□□□□□ -0.55
PDLIM7-210ENST00000503827 OSR1Q8TAX0 266 aaPredicted RBP11.59□□□□□ -0.55
PDLIM7-210ENST00000503827 TM2D1Q9BX74 207 aa11.59□□□□□ -0.55
PDLIM7-210ENST00000503827 IGKV1-6A0A0C4DH72 117 aa11.58□□□□□ -0.56
PDLIM7-210ENST00000503827 NPIPB5A8MRT5 1133 aa11.58□□□□□ -0.56
PDLIM7-210ENST00000503827 M0R2N4 97 aa11.58□□□□□ -0.56
PDLIM7-210ENST00000503827 DHFRP00374 187 aa11.58□□□□□ -0.56
PDLIM7-210ENST00000503827 LALBAP00709 142 aa11.58□□□□□ -0.56
PDLIM7-210ENST00000503827 SRMP19623 302 aa11.58□□□□□ -0.56
PDLIM7-210ENST00000503827 SERPINB10P48595 397 aa11.58□□□□□ -0.56
PDLIM7-210ENST00000503827 C19orf35Q6ZS72 473 aa11.58□□□□□ -0.56
PDLIM7-210ENST00000503827 ADTRPQ96IZ2 230 aa11.58□□□□□ -0.56
PDLIM7-210ENST00000503827 PGLYRP3Q96LB9 341 aa11.58□□□□□ -0.56
PDLIM7-210ENST00000503827 IGHV4-4A0A075B6R2 117 aa11.57□□□□□ -0.56
PDLIM7-210ENST00000503827 TRBV7-1A0A0A6YYK4 115 aa11.57□□□□□ -0.56
PDLIM7-210ENST00000503827 EI24O14681 340 aa11.57□□□□□ -0.56
PDLIM7-210ENST00000503827 CLEC3BP05452 202 aa11.57□□□□□ -0.56
PDLIM7-210ENST00000503827 SAA1P0DJI8 122 aaPredicted RBP11.57□□□□□ -0.56
PDLIM7-210ENST00000503827 DCKP27707 260 aa11.57□□□□□ -0.56
PDLIM7-210ENST00000503827 PSMB6P28072 239 aa11.57□□□□□ -0.56
PDLIM7-210ENST00000503827 APRG1Q8IVJ8 170 aa11.57□□□□□ -0.56
PDLIM7-210ENST00000503827 ZFP41Q8N8Y5 198 aa11.57□□□□□ -0.56
PDLIM7-210ENST00000503827 GGHQ92820 318 aa11.57□□□□□ -0.56
PDLIM7-210ENST00000503827 FANCD2OSQ96PS1 177 aa11.57□□□□□ -0.56
PDLIM7-210ENST00000503827 DERL3Q96Q80 235 aa11.57□□□□□ -0.56
PDLIM7-210ENST00000503827 FYTTD1Q96QD9 318 aaKnown RBP11.57□□□□□ -0.56
PDLIM7-210ENST00000503827 HRH4Q9H3N8 390 aa11.57□□□□□ -0.56
PDLIM7-210ENST00000503827 C12orf4Q9NQ89 552 aa11.57□□□□□ -0.56
PDLIM7-210ENST00000503827 TRDCB7Z8K6 153 aa11.56□□□□□ -0.56
PDLIM7-210ENST00000503827 TEX22C9J3V5 150 aa11.56□□□□□ -0.56
PDLIM7-210ENST00000503827 HIST1H1BP16401 226 aaKnown RBP11.56□□□□□ -0.56
PDLIM7-210ENST00000503827 PVRIGQ6DKI7 326 aa11.56□□□□□ -0.56
PDLIM7-210ENST00000503827 POM121L12Q8N7R1 296 aa11.56□□□□□ -0.56
PDLIM7-210ENST00000503827 SLC7A6OSQ96CW6 309 aaPredicted RBP11.56□□□□□ -0.56
PDLIM7-210ENST00000503827 CXorf58Q96LI9 332 aa11.56□□□□□ -0.56
PDLIM7-210ENST00000503827 RBM7Q9Y580 266 aaKnown RBP11.56□□□□□ -0.56
PDLIM7-210ENST00000503827 TRAV10A0A0B4J240 114 aa11.55□□□□□ -0.56
PDLIM7-210ENST00000503827 IGHV3-35A0A0C4DH35 117 aa11.55□□□□□ -0.56
PDLIM7-210ENST00000503827 P0DMU3 169 aa11.55□□□□□ -0.56
PDLIM7-210ENST00000503827 FAM231AP0DMU4 169 aa11.55□□□□□ -0.56
PDLIM7-210ENST00000503827 FAM231CP0DMU5 169 aa11.55□□□□□ -0.56
PDLIM7-210ENST00000503827 MYL12AP19105 171 aa11.55□□□□□ -0.56
PDLIM7-210ENST00000503827 DUTP33316 252 aaKnown RBP11.55□□□□□ -0.56
PDLIM7-210ENST00000503827 CMC4P56277 68 aaPredicted RBP11.55□□□□□ -0.56
PDLIM7-210ENST00000503827 UNC119Q13432 240 aa11.55□□□□□ -0.56
PDLIM7-210ENST00000503827 LGALS9BQ3B8N2 356 aa11.55□□□□□ -0.56
PDLIM7-210ENST00000503827 TTC23Q5W5X9 447 aa11.55□□□□□ -0.56
PDLIM7-210ENST00000503827 PLET1Q6UQ28 207 aa11.55□□□□□ -0.56
PDLIM7-210ENST00000503827 CENPSQ8N2Z9 138 aa11.55□□□□□ -0.56
PDLIM7-210ENST00000503827 MAPKAPK5-AS1Q8N8E1 139 aa11.55□□□□□ -0.56
PDLIM7-210ENST00000503827 OR4A4PQ8NGN8 299 aa11.55□□□□□ -0.56
PDLIM7-210ENST00000503827 C5orf30Q96GV9 206 aa11.55□□□□□ -0.56
PDLIM7-210ENST00000503827 DCUN1D5Q9BTE7 237 aa11.55□□□□□ -0.56
PDLIM7-210ENST00000503827 SLC2A9Q9NRM0 540 aa11.55□□□□□ -0.56
PDLIM7-210ENST00000503827 BET1O15155 118 aa11.54□□□□□ -0.56
PDLIM7-210ENST00000503827 SOCS1O15524 211 aa11.54□□□□□ -0.56
PDLIM7-210ENST00000503827 CRYGCP07315 174 aa11.54□□□□□ -0.56
PDLIM7-210ENST00000503827 DEFA4P12838 97 aa11.54□□□□□ -0.56
PDLIM7-210ENST00000503827 GPR183P32249 361 aa11.54□□□□□ -0.56
PDLIM7-210ENST00000503827 RPL27AP46776 148 aaKnown RBP11.54□□□□□ -0.56
PDLIM7-210ENST00000503827 TMEM187Q14656 261 aa11.54□□□□□ -0.56
PDLIM7-210ENST00000503827 ZNF645Q8N7E2 425 aa11.54□□□□□ -0.56
PDLIM7-210ENST00000503827 OR10J5Q8NHC4 309 aa11.54□□□□□ -0.56
PDLIM7-210ENST00000503827 CMSS1Q9BQ75 279 aaKnown RBP11.54□□□□□ -0.56
PDLIM7-210ENST00000503827 RNF126Q9BV68 326 aa11.54□□□□□ -0.56
PDLIM7-210ENST00000503827 ZNF436Q9C0F3 470 aaPredicted RBP11.54□□□□□ -0.56
PDLIM7-210ENST00000503827 OR51E2Q9H255 320 aa11.54□□□□□ -0.56
PDLIM7-210ENST00000503827 KCNK15Q9H427 330 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms