RNA–Protein interactions for RNA: ENST00000503291.5

CDC42SE2-206, Transcript of CDC42 small effector 2, humanhuman

TSL 1 (best) BASIC

Gene CDC42SE2, Length 2,025 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-206ENST00000503291 LRTM2Q8N967 370 aa16.32■□□□□ 0.2
CDC42SE2-206ENST00000503291 COQ8AQ8NI60 647 aa16.32■□□□□ 0.2
CDC42SE2-206ENST00000503291 RNF5Q99942 180 aa16.32■□□□□ 0.2
CDC42SE2-206ENST00000503291 CRLF1O75462 422 aa16.31■□□□□ 0.2
CDC42SE2-206ENST00000503291 HRASP01112 189 aa16.31■□□□□ 0.2
CDC42SE2-206ENST00000503291 NQO2P16083 231 aa16.31■□□□□ 0.2
CDC42SE2-206ENST00000503291 CNTFRP26992 372 aa16.31■□□□□ 0.2
CDC42SE2-206ENST00000503291 G6PCP35575 357 aa16.31■□□□□ 0.2
CDC42SE2-206ENST00000503291 LY6EQ16553 131 aa16.31■□□□□ 0.2
CDC42SE2-206ENST00000503291 RBMS3Q6XE24 437 aaKnown RBP16.31■□□□□ 0.2
CDC42SE2-206ENST00000503291 C12orf45Q8N5I9 185 aaPredicted RBP16.31■□□□□ 0.2
CDC42SE2-206ENST00000503291 UXS1Q8NBZ7 420 aa16.31■□□□□ 0.2
CDC42SE2-206ENST00000503291 SSMEM1Q8WWF3 244 aa16.31■□□□□ 0.2
CDC42SE2-206ENST00000503291 R3HDM4Q96D70 268 aa16.31■□□□□ 0.2
CDC42SE2-206ENST00000503291 RHOVQ96L33 236 aa16.31■□□□□ 0.2
CDC42SE2-206ENST00000503291 COMMD9Q9P000 198 aa16.31■□□□□ 0.2
CDC42SE2-206ENST00000503291 TCF19Q9Y242 345 aa16.31■□□□□ 0.2
CDC42SE2-206ENST00000503291 HOXA3O43365 443 aaPredicted RBP16.31■□□□□ 0.2
CDC42SE2-206ENST00000503291 F2RL1P55085 397 aa16.31■□□□□ 0.2
CDC42SE2-206ENST00000503291 SSX9Q7RTT3 188 aa16.31■□□□□ 0.2
CDC42SE2-206ENST00000503291 SLC35G3Q8N808 338 aa16.31■□□□□ 0.2
CDC42SE2-206ENST00000503291 IL22RA2Q969J5 263 aa16.31■□□□□ 0.2
CDC42SE2-206ENST00000503291 SEC22AQ96IW7 307 aa16.31■□□□□ 0.2
CDC42SE2-206ENST00000503291 OR51J1Q9H342 316 aa16.31■□□□□ 0.2
CDC42SE2-206ENST00000503291 A0A0B4J2A0 478 aa16.3■□□□□ 0.2
CDC42SE2-206ENST00000503291 MARCH11A6NNE9 402 aa16.3■□□□□ 0.2
CDC42SE2-206ENST00000503291 IGLV2-23P01705 113 aa16.3■□□□□ 0.2
CDC42SE2-206ENST00000503291 LYZL2Q7Z4W2 148 aa16.3■□□□□ 0.2
CDC42SE2-206ENST00000503291 TMEM219Q86XT9 240 aa16.3■□□□□ 0.2
CDC42SE2-206ENST00000503291 OR5R1Q8NH85 324 aa16.3■□□□□ 0.2
CDC42SE2-206ENST00000503291 TSNAXQ99598 290 aaKnown RBP16.3■□□□□ 0.2
CDC42SE2-206ENST00000503291 TNFRSF19Q9NS68 423 aa16.3■□□□□ 0.2
CDC42SE2-206ENST00000503291 SHPKQ9UHJ6 478 aa16.3■□□□□ 0.2
CDC42SE2-206ENST00000503291 FAM157CP0CG43 387 aa16.29■□□□□ 0.2
CDC42SE2-206ENST00000503291 MMDQ15546 238 aa16.29■□□□□ 0.2
CDC42SE2-206ENST00000503291 DMBX1Q8NFW5 382 aa16.29■□□□□ 0.2
CDC42SE2-206ENST00000503291 AIFM2Q9BRQ8 373 aa16.29■□□□□ 0.2
CDC42SE2-206ENST00000503291 PLSCR3Q9NRY6 295 aa16.29■□□□□ 0.2
CDC42SE2-206ENST00000503291 A6NDX4 124 aa16.29■□□□□ 0.2
CDC42SE2-206ENST00000503291 BTBD17A6NE02 478 aa16.29■□□□□ 0.2
CDC42SE2-206ENST00000503291 IGKV1-5P01602 117 aa16.29■□□□□ 0.2
CDC42SE2-206ENST00000503291 PITPNC1Q9UKF7 332 aa16.29■□□□□ 0.2
CDC42SE2-206ENST00000503291 TEP1Q99973 2627 aaKnown RBP16.28■□□□□ 0.2
CDC42SE2-206ENST00000503291 NCBP2LA6PVI3 153 aaKnown RBP16.28■□□□□ 0.2
CDC42SE2-206ENST00000503291 SLC25A17O43808 307 aa16.28■□□□□ 0.2
CDC42SE2-206ENST00000503291 ATG12O94817 140 aa16.28■□□□□ 0.2
CDC42SE2-206ENST00000503291 AKR1C2P52895 323 aa16.28■□□□□ 0.2
CDC42SE2-206ENST00000503291 ERVK-16P61578 105 aa16.28■□□□□ 0.2
CDC42SE2-206ENST00000503291 PSG5Q15238 335 aa16.28■□□□□ 0.2
CDC42SE2-206ENST00000503291 POU2AF1Q16633 256 aa16.28■□□□□ 0.2
CDC42SE2-206ENST00000503291 RBM14Q96PK6 669 aaKnown RBP16.28■□□□□ 0.2
CDC42SE2-206ENST00000503291 PIGBOS1A0A0B4J2F0 54 aa16.28■□□□□ 0.2
CDC42SE2-206ENST00000503291 DBX1A6NMT0 343 aa16.28■□□□□ 0.2
CDC42SE2-206ENST00000503291 NBR2O15453 112 aa16.28■□□□□ 0.2
CDC42SE2-206ENST00000503291 SSNA1O43805 119 aa16.28■□□□□ 0.2
CDC42SE2-206ENST00000503291 HOXB5P09067 269 aa16.28■□□□□ 0.2
CDC42SE2-206ENST00000503291 SAA1P0DJI8 122 aaPredicted RBP16.28■□□□□ 0.2
CDC42SE2-206ENST00000503291 VDAC1P21796 283 aa16.28■□□□□ 0.2
CDC42SE2-206ENST00000503291 OR4A47Q6IF82 309 aa16.28■□□□□ 0.2
CDC42SE2-206ENST00000503291 NPBQ8NG41 125 aa16.28■□□□□ 0.2
CDC42SE2-206ENST00000503291 RRNAD1Q96FB5 475 aaKnown RBP16.28■□□□□ 0.2
CDC42SE2-206ENST00000503291 ADAP1O75689 374 aa16.27■□□□□ 0.2
CDC42SE2-206ENST00000503291 UBE2KP61086 200 aa16.27■□□□□ 0.2
CDC42SE2-206ENST00000503291 VMA21Q3ZAQ7 101 aa16.27■□□□□ 0.2
CDC42SE2-206ENST00000503291 OR8H1Q8NGG4 311 aa16.27■□□□□ 0.2
CDC42SE2-206ENST00000503291 RNASE11Q8TAA1 199 aaKnown RBP16.27■□□□□ 0.2
CDC42SE2-206ENST00000503291 DUX5Q96PT3 197 aa16.27■□□□□ 0.2
CDC42SE2-206ENST00000503291 SLC25A33Q9BSK2 321 aa16.27■□□□□ 0.2
CDC42SE2-206ENST00000503291 TMEM140Q9NV12 185 aa16.27■□□□□ 0.2
CDC42SE2-206ENST00000503291 C1RLQ9NZP8 487 aa16.27■□□□□ 0.2
CDC42SE2-206ENST00000503291 RRHO14718 337 aa16.26■□□□□ 0.19
CDC42SE2-206ENST00000503291 OR2F2O95006 317 aa16.26■□□□□ 0.19
CDC42SE2-206ENST00000503291 NDUFA3O95167 84 aa16.26■□□□□ 0.19
CDC42SE2-206ENST00000503291 IZUMO4Q1ZYL8 232 aa16.26■□□□□ 0.19
CDC42SE2-206ENST00000503291 H2BFWTQ7Z2G1 175 aa16.26■□□□□ 0.19
CDC42SE2-206ENST00000503291 ZNF418Q8TF45 676 aaPredicted RBP16.26■□□□□ 0.19
CDC42SE2-206ENST00000503291 FBXL15Q9H469 300 aa16.26■□□□□ 0.19
CDC42SE2-206ENST00000503291 KIAA1456Q9P272 454 aa16.26■□□□□ 0.19
CDC42SE2-206ENST00000503291 METTL1Q9UBP6 276 aaKnown RBP16.26■□□□□ 0.19
CDC42SE2-206ENST00000503291 VPREB3Q9UKI3 123 aa16.26■□□□□ 0.19
CDC42SE2-206ENST00000503291 POMT1Q9Y6A1 747 aa16.26■□□□□ 0.19
CDC42SE2-206ENST00000503291 A0A0G2JRQ6 117 aa16.26■□□□□ 0.19
CDC42SE2-206ENST00000503291 DUXBA0A1W2PPF3 345 aa16.26■□□□□ 0.19
CDC42SE2-206ENST00000503291 OR2A4O95047 310 aa16.26■□□□□ 0.19
CDC42SE2-206ENST00000503291 SPDEFO95238 335 aa16.26■□□□□ 0.19
CDC42SE2-206ENST00000503291 PUSL1Q8N0Z8 303 aaKnown RBP16.26■□□□□ 0.19
CDC42SE2-206ENST00000503291 LSM10Q969L4 123 aaKnown RBP16.26■□□□□ 0.19
CDC42SE2-206ENST00000503291 OR2A7Q96R45 310 aa16.26■□□□□ 0.19
CDC42SE2-206ENST00000503291 TMED3Q9Y3Q3 217 aa16.26■□□□□ 0.19
CDC42SE2-206ENST00000503291 MMP24Q9Y5R2 645 aa16.26■□□□□ 0.19
CDC42SE2-206ENST00000503291 CRYGBP07316 175 aa16.25■□□□□ 0.19
CDC42SE2-206ENST00000503291 P0C879 139 aa16.25■□□□□ 0.19
CDC42SE2-206ENST00000503291 C2orf68Q2NKX9 166 aa16.25■□□□□ 0.19
CDC42SE2-206ENST00000503291 NMSQ5H8A3 153 aa16.25■□□□□ 0.19
CDC42SE2-206ENST00000503291 GGNBP1Q5YKI7 109 aa16.25■□□□□ 0.19
CDC42SE2-206ENST00000503291 TMEM86BQ8N661 226 aa16.25■□□□□ 0.19
CDC42SE2-206ENST00000503291 TEX45Q8NA69 505 aa16.25■□□□□ 0.19
CDC42SE2-206ENST00000503291 VSTM2AQ8TAG5 236 aa16.25■□□□□ 0.19
CDC42SE2-206ENST00000503291 CHIAQ9BZP6 476 aa16.25■□□□□ 0.19
CDC42SE2-206ENST00000503291 RAB18Q9NP72 206 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms