RNA–Protein interactions for RNA: ENST00000498077.6

XRN1-214, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 5,600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-214ENST00000498077 AENQ8WTP8 325 aaKnown RBP1.12□□□□□ -2.23
XRN1-214ENST00000498077 CCDC42Q96M95 316 aa1.12□□□□□ -2.23
XRN1-214ENST00000498077 FAM213AQ9BRX8 229 aa1.12□□□□□ -2.23
XRN1-214ENST00000498077 CHRDL1Q9BU40 450 aa1.12□□□□□ -2.23
XRN1-214ENST00000498077 ZNF471Q9BX82 626 aaPredicted RBP1.12□□□□□ -2.23
XRN1-214ENST00000498077 GPR63Q9BZJ6 419 aa1.12□□□□□ -2.23
XRN1-214ENST00000498077 ATG10Q9H0Y0 220 aa1.12□□□□□ -2.23
XRN1-214ENST00000498077 CALYQ9NYX4 217 aa1.12□□□□□ -2.23
XRN1-214ENST00000498077 IL36RNQ9UBH0 155 aa1.12□□□□□ -2.23
XRN1-214ENST00000498077 P2RX2Q9UBL9 471 aa1.12□□□□□ -2.23
XRN1-214ENST00000498077 ANAPC10Q9UM13 185 aa1.12□□□□□ -2.23
XRN1-214ENST00000498077 LYVE1Q9Y5Y7 322 aa1.12□□□□□ -2.23
XRN1-214ENST00000498077 TRAV25A0A0B4J276 109 aa1.11□□□□□ -2.23
XRN1-214ENST00000498077 A0A1B0GTI1 187 aa1.11□□□□□ -2.23
XRN1-214ENST00000498077 KPNA4O00629 521 aaPredicted RBP1.11□□□□□ -2.23
XRN1-214ENST00000498077 NUDT21O43809 227 aaKnown RBP1.11□□□□□ -2.23
XRN1-214ENST00000498077 OR1I1O60431 355 aa1.11□□□□□ -2.23
XRN1-214ENST00000498077 LGALS2P05162 132 aa1.11□□□□□ -2.23
XRN1-214ENST00000498077 NQO2P16083 231 aa1.11□□□□□ -2.23
XRN1-214ENST00000498077 CD86P42081 329 aa1.11□□□□□ -2.23
XRN1-214ENST00000498077 DUSP3P51452 185 aaPredicted RBP1.11□□□□□ -2.23
XRN1-214ENST00000498077 PSG7Q13046 419 aa1.11□□□□□ -2.23
XRN1-214ENST00000498077 WHAMMP3Q1A5X7 153 aa1.11□□□□□ -2.23
XRN1-214ENST00000498077 TMEM128Q5BJH2 165 aa1.11□□□□□ -2.23
XRN1-214ENST00000498077 YIF1BQ5BJH7 314 aa1.11□□□□□ -2.23
XRN1-214ENST00000498077 LRIF1Q5T3J3 769 aa1.11□□□□□ -2.23
XRN1-214ENST00000498077 LCE5AQ5TCM9 118 aa1.11□□□□□ -2.23
XRN1-214ENST00000498077 Q5VSD8 79 aa1.11□□□□□ -2.23
XRN1-214ENST00000498077 PTRHD1Q6GMV3 140 aaKnown RBP1.11□□□□□ -2.23
XRN1-214ENST00000498077 GTF2H5Q6ZYL4 71 aa1.11□□□□□ -2.23
XRN1-214ENST00000498077 C1QL2Q7Z5L3 287 aa1.11□□□□□ -2.23
XRN1-214ENST00000498077 FAM86B1Q8N7N1 296 aa1.11□□□□□ -2.23
XRN1-214ENST00000498077 PI4KAP1Q8N8J0 262 aa1.11□□□□□ -2.23
XRN1-214ENST00000498077 Q8NA96 180 aa1.11□□□□□ -2.23
XRN1-214ENST00000498077 OR1M1Q8NGA1 313 aa1.11□□□□□ -2.23
XRN1-214ENST00000498077 OR2D3Q8NGH3 330 aa1.11□□□□□ -2.23
XRN1-214ENST00000498077 UBXN10Q96LJ8 280 aa1.11□□□□□ -2.23
XRN1-214ENST00000498077 DUX5Q96PT3 197 aa1.11□□□□□ -2.23
XRN1-214ENST00000498077 SSX3Q99909 188 aa1.11□□□□□ -2.23
XRN1-214ENST00000498077 Q9BRP9 147 aa1.11□□□□□ -2.23
XRN1-214ENST00000498077 LIMD2Q9BT23 127 aa1.11□□□□□ -2.23
XRN1-214ENST00000498077 TUBA4BQ9H853 241 aa1.11□□□□□ -2.23
XRN1-214ENST00000498077 SDHAF2Q9NX18 166 aa1.11□□□□□ -2.23
XRN1-214ENST00000498077 OR1A1Q9P1Q5 309 aa1.11□□□□□ -2.23
XRN1-214ENST00000498077 KCNE5Q9UJ90 142 aa1.11□□□□□ -2.23
XRN1-214ENST00000498077 SLC22A13Q9Y226 551 aa1.11□□□□□ -2.23
XRN1-214ENST00000498077 KCNE2Q9Y6J6 123 aa1.11□□□□□ -2.23
XRN1-214ENST00000498077 REV3LO60673 3130 aa1.11□□□□□ -2.23
XRN1-214ENST00000498077 A8MT66 165 aa1.11□□□□□ -2.23
XRN1-214ENST00000498077 E9PMD0 336 aa1.11□□□□□ -2.23
XRN1-214ENST00000498077 SSX4O60224 188 aa1.11□□□□□ -2.23
XRN1-214ENST00000498077 PDCD6O75340 191 aa1.11□□□□□ -2.23
XRN1-214ENST00000498077 MT-ND3P03897 115 aa1.11□□□□□ -2.23
XRN1-214ENST00000498077 METTL15P1P0C7V9 234 aa1.11□□□□□ -2.23
XRN1-214ENST00000498077 ZNF735P0CB33 412 aa1.11□□□□□ -2.23
XRN1-214ENST00000498077 IDO1P14902 403 aa1.11□□□□□ -2.23
XRN1-214ENST00000498077 AREGP15514 252 aa1.11□□□□□ -2.23
XRN1-214ENST00000498077 PPIBP23284 216 aaKnown RBP1.11□□□□□ -2.23
XRN1-214ENST00000498077 LAP3P28838 519 aa1.11□□□□□ -2.23
XRN1-214ENST00000498077 TLX1P31314 330 aaPredicted RBP1.11□□□□□ -2.23
XRN1-214ENST00000498077 CKS2P33552 79 aa1.11□□□□□ -2.23
XRN1-214ENST00000498077 TFPI2P48307 235 aa1.11□□□□□ -2.23
XRN1-214ENST00000498077 CLDN2P57739 230 aa1.11□□□□□ -2.23
XRN1-214ENST00000498077 IGLV3-21P80748 117 aaPredicted RBP1.11□□□□□ -2.23
XRN1-214ENST00000498077 IL24Q13007 206 aa1.11□□□□□ -2.23
XRN1-214ENST00000498077 EDDM3AQ14507 147 aa1.11□□□□□ -2.23
XRN1-214ENST00000498077 OR7A5Q15622 319 aa1.11□□□□□ -2.23
XRN1-214ENST00000498077 PSG3Q16557 428 aa1.11□□□□□ -2.23
XRN1-214ENST00000498077 TSTQ16762 297 aaKnown RBP1.11□□□□□ -2.23
XRN1-214ENST00000498077 ZNF284Q2VY69 593 aa1.11□□□□□ -2.23
XRN1-214ENST00000498077 KRTAP20-1Q3LI63 56 aa1.11□□□□□ -2.23
XRN1-214ENST00000498077 FIGLAQ6QHK4 219 aa1.11□□□□□ -2.23
XRN1-214ENST00000498077 TMEM86BQ8N661 226 aa1.11□□□□□ -2.23
XRN1-214ENST00000498077 OXGR1Q96P68 337 aa1.11□□□□□ -2.23
XRN1-214ENST00000498077 ALKBH3Q96Q83 286 aaPredicted RBP1.11□□□□□ -2.23
XRN1-214ENST00000498077 PRRT1Q99946 306 aa1.11□□□□□ -2.23
XRN1-214ENST00000498077 SRD5A3Q9H8P0 318 aa1.11□□□□□ -2.23
XRN1-214ENST00000498077 LRTM1Q9HBL6 345 aa1.11□□□□□ -2.23
XRN1-214ENST00000498077 NDRG4Q9ULP0 352 aaKnown RBP1.11□□□□□ -2.23
XRN1-214ENST00000498077 VCANP13611 3396 aa1.11□□□□□ -2.23
XRN1-214ENST00000498077 PLXNB2O15031 1838 aa1.11□□□□□ -2.23
XRN1-214ENST00000498077 PRUNE2Q8WUY3 3088 aa1.11□□□□□ -2.23
XRN1-214ENST00000498077 IGHV1-3A0A0C4DH29 117 aa1.11□□□□□ -2.23
XRN1-214ENST00000498077 SPAARA0A1B0GVQ0 90 aa1.11□□□□□ -2.23
XRN1-214ENST00000498077 A0A1W2PS29 197 aa1.11□□□□□ -2.23
XRN1-214ENST00000498077 SNTNA6NMZ2 147 aa1.11□□□□□ -2.23
XRN1-214ENST00000498077 OR2AT4A6NND4 320 aa1.11□□□□□ -2.23
XRN1-214ENST00000498077 M0R2T5 61 aa1.11□□□□□ -2.23
XRN1-214ENST00000498077 KLK8O60259 260 aa1.11□□□□□ -2.23
XRN1-214ENST00000498077 SCGB1D2O95969 90 aa1.11□□□□□ -2.23
XRN1-214ENST00000498077 ASGR1P07306 291 aa1.11□□□□□ -2.23
XRN1-214ENST00000498077 FGF2P09038 288 aa1.11□□□□□ -2.23
XRN1-214ENST00000498077 C8orf88P0DMB2 117 aa1.11□□□□□ -2.23
XRN1-214ENST00000498077 GAGE2BQ13066 116 aa1.11□□□□□ -2.23
XRN1-214ENST00000498077 ZNF154Q13106 437 aa1.11□□□□□ -2.23
XRN1-214ENST00000498077 IRF3Q14653 427 aa1.11□□□□□ -2.23
XRN1-214ENST00000498077 MSMO1Q15800 293 aa1.11□□□□□ -2.23
XRN1-214ENST00000498077 PIK3CD-AS1Q5SR53 167 aa1.11□□□□□ -2.23
XRN1-214ENST00000498077 TMEM170BQ5T4T1 132 aa1.11□□□□□ -2.23
XRN1-214ENST00000498077 AHSA2Q719I0 299 aa1.11□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms