RNA–Protein interactions for RNA: ENST00000497539.5

SNRNP200-208, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 1 (best)

Gene SNRNP200, Length 2,666 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-208ENST00000497539 CMTM1Q8IZ96 169 aa9.7□□□□□ -0.86
SNRNP200-208ENST00000497539 FRZBQ92765 325 aa9.7□□□□□ -0.86
SNRNP200-208ENST00000497539 ZNF488Q96MN9 340 aa9.7□□□□□ -0.86
SNRNP200-208ENST00000497539 VAX2Q9UIW0 290 aa9.7□□□□□ -0.86
SNRNP200-208ENST00000497539 WIPI2Q9Y4P8 454 aa9.7□□□□□ -0.86
SNRNP200-208ENST00000497539 C3orf85A0A1B0GTC6 90 aa9.69□□□□□ -0.86
SNRNP200-208ENST00000497539 H3BP45 60 aa9.69□□□□□ -0.86
SNRNP200-208ENST00000497539 ADAM20O43506 726 aa9.69□□□□□ -0.86
SNRNP200-208ENST00000497539 RPL23AP62750 156 aaKnown RBP9.69□□□□□ -0.86
SNRNP200-208ENST00000497539 LDLRAD2Q5SZI1 272 aa9.69□□□□□ -0.86
SNRNP200-208ENST00000497539 PCSK4Q6UW60 755 aa9.69□□□□□ -0.86
SNRNP200-208ENST00000497539 TMEM252Q8N6L7 170 aa9.69□□□□□ -0.86
SNRNP200-208ENST00000497539 PINX1Q96BK5 328 aaKnown RBP9.69□□□□□ -0.86
SNRNP200-208ENST00000497539 MBNL3Q9NUK0 354 aaKnown RBP9.69□□□□□ -0.86
SNRNP200-208ENST00000497539 UBE2J1Q9Y385 318 aaPredicted RBP9.69□□□□□ -0.86
SNRNP200-208ENST00000497539 IGKV1-6A0A0C4DH72 117 aa9.69□□□□□ -0.86
SNRNP200-208ENST00000497539 DUXBA0A1W2PPF3 345 aa9.69□□□□□ -0.86
SNRNP200-208ENST00000497539 STAG3L2P0CL84 134 aa9.69□□□□□ -0.86
SNRNP200-208ENST00000497539 SPINK2P20155 84 aa9.69□□□□□ -0.86
SNRNP200-208ENST00000497539 FOXC1Q12948 553 aa9.69□□□□□ -0.86
SNRNP200-208ENST00000497539 TMEM144Q7Z5S9 345 aa9.69□□□□□ -0.86
SNRNP200-208ENST00000497539 ODF3L1Q8IXM7 274 aa9.69□□□□□ -0.86
SNRNP200-208ENST00000497539 Q8NA96 180 aa9.69□□□□□ -0.86
SNRNP200-208ENST00000497539 NIPSNAP3BQ9BS92 247 aa9.69□□□□□ -0.86
SNRNP200-208ENST00000497539 EP300Q09472 2414 aaPredicted RBP9.69□□□□□ -0.86
SNRNP200-208ENST00000497539 SH2D1BO14796 132 aa9.69□□□□□ -0.86
SNRNP200-208ENST00000497539 MPPED1O15442 326 aa9.69□□□□□ -0.86
SNRNP200-208ENST00000497539 OR2H2O95918 312 aa9.69□□□□□ -0.86
SNRNP200-208ENST00000497539 CLEC3BP05452 202 aa9.69□□□□□ -0.86
SNRNP200-208ENST00000497539 CFHR2P36980 270 aa9.69□□□□□ -0.86
SNRNP200-208ENST00000497539 FBLN7Q53RD9 439 aa9.69□□□□□ -0.86
SNRNP200-208ENST00000497539 Q6ZR03 302 aa9.69□□□□□ -0.86
SNRNP200-208ENST00000497539 FAM90A1Q86YD7 464 aa9.69□□□□□ -0.86
SNRNP200-208ENST00000497539 ZNF695Q8IW36 515 aa9.69□□□□□ -0.86
SNRNP200-208ENST00000497539 TVP23CQ96ET8 276 aa9.69□□□□□ -0.86
SNRNP200-208ENST00000497539 GNG13Q9P2W3 67 aa9.69□□□□□ -0.86
SNRNP200-208ENST00000497539 POLR3KQ9Y2Y1 108 aaPredicted RBP9.69□□□□□ -0.86
SNRNP200-208ENST00000497539 CLEC18AA5D8T8 446 aa9.68□□□□□ -0.86
SNRNP200-208ENST00000497539 HSPB6O14558 160 aa9.68□□□□□ -0.86
SNRNP200-208ENST00000497539 SCTP09683 121 aa9.68□□□□□ -0.86
SNRNP200-208ENST00000497539 RAB11AP62491 216 aa9.68□□□□□ -0.86
SNRNP200-208ENST00000497539 ZNF266Q14584 549 aa9.68□□□□□ -0.86
SNRNP200-208ENST00000497539 IZUMO4Q1ZYL8 232 aa9.68□□□□□ -0.86
SNRNP200-208ENST00000497539 SAMD13Q5VXD3 122 aa9.68□□□□□ -0.86
SNRNP200-208ENST00000497539 MRGPRGQ86SM5 289 aa9.68□□□□□ -0.86
SNRNP200-208ENST00000497539 TBC1D26Q86UD7 250 aa9.68□□□□□ -0.86
SNRNP200-208ENST00000497539 CLEC18CQ8NCF0 446 aa9.68□□□□□ -0.86
SNRNP200-208ENST00000497539 ZNF738Q8NE65 137 aa9.68□□□□□ -0.86
SNRNP200-208ENST00000497539 ZCCHC14Q8WYQ9 949 aaKnown RBP9.68□□□□□ -0.86
SNRNP200-208ENST00000497539 IL22RA2Q969J5 263 aa9.68□□□□□ -0.86
SNRNP200-208ENST00000497539 SCNM1Q9BWG6 230 aa9.68□□□□□ -0.86
SNRNP200-208ENST00000497539 TMEM140Q9NV12 185 aa9.68□□□□□ -0.86
SNRNP200-208ENST00000497539 HIF1ANQ9NWT6 349 aa9.68□□□□□ -0.86
SNRNP200-208ENST00000497539 ELOVL5Q9NYP7 299 aa9.68□□□□□ -0.86
SNRNP200-208ENST00000497539 JKAMPQ9P055 326 aa9.68□□□□□ -0.86
SNRNP200-208ENST00000497539 PIGBOS1A0A0B4J2F0 54 aa9.68□□□□□ -0.86
SNRNP200-208ENST00000497539 ZFP92A6NM28 416 aa9.68□□□□□ -0.86
SNRNP200-208ENST00000497539 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP9.68□□□□□ -0.86
SNRNP200-208ENST00000497539 IFNL4K9M1U5 179 aa9.68□□□□□ -0.86
SNRNP200-208ENST00000497539 IGHV3-13P01766 116 aa9.68□□□□□ -0.86
SNRNP200-208ENST00000497539 GCH1P30793 250 aa9.68□□□□□ -0.86
SNRNP200-208ENST00000497539 GLIPR1P48060 266 aa9.68□□□□□ -0.86
SNRNP200-208ENST00000497539 C20orf204Q6ZNR8 217 aa9.68□□□□□ -0.86
SNRNP200-208ENST00000497539 OR2V2Q96R30 315 aa9.68□□□□□ -0.86
SNRNP200-208ENST00000497539 PLEKHF2Q9H8W4 249 aa9.68□□□□□ -0.86
SNRNP200-208ENST00000497539 KIAA1456Q9P272 454 aa9.68□□□□□ -0.86
SNRNP200-208ENST00000497539 IGLV3-9A0A075B6K5 115 aa9.67□□□□□ -0.86
SNRNP200-208ENST00000497539 A0A1B0GW64 132 aa9.67□□□□□ -0.86
SNRNP200-208ENST00000497539 CHST1O43916 411 aa9.67□□□□□ -0.86
SNRNP200-208ENST00000497539 TIMM8AO60220 97 aaPredicted RBP9.67□□□□□ -0.86
SNRNP200-208ENST00000497539 RHOGP84095 191 aa9.67□□□□□ -0.86
SNRNP200-208ENST00000497539 MSMO1Q15800 293 aa9.67□□□□□ -0.86
SNRNP200-208ENST00000497539 PRSS8Q16651 343 aa9.67□□□□□ -0.86
SNRNP200-208ENST00000497539 RPRMLQ8N4K4 120 aa9.67□□□□□ -0.86
SNRNP200-208ENST00000497539 CLDND2Q8NHS1 167 aa9.67□□□□□ -0.86
SNRNP200-208ENST00000497539 ABHD14BQ96IU4 210 aa9.67□□□□□ -0.86
SNRNP200-208ENST00000497539 SNX22Q96L94 193 aa9.67□□□□□ -0.86
SNRNP200-208ENST00000497539 TMEM222Q9H0R3 208 aa9.67□□□□□ -0.86
SNRNP200-208ENST00000497539 C11orf1Q9H5F2 150 aa9.67□□□□□ -0.86
SNRNP200-208ENST00000497539 COX11Q9Y6N1 276 aa9.67□□□□□ -0.86
SNRNP200-208ENST00000497539 TRAV26-1A0A087WT03 109 aa9.67□□□□□ -0.86
SNRNP200-208ENST00000497539 C3orf80F5H4A9 247 aa9.67□□□□□ -0.86
SNRNP200-208ENST00000497539 MMP9P14780 707 aa9.67□□□□□ -0.86
SNRNP200-208ENST00000497539 GLRXP35754 106 aa9.67□□□□□ -0.86
SNRNP200-208ENST00000497539 SLC35E4Q6ICL7 350 aa9.67□□□□□ -0.86
SNRNP200-208ENST00000497539 LCN15Q6UWW0 184 aa9.67□□□□□ -0.86
SNRNP200-208ENST00000497539 WDR82Q6UXN9 313 aa9.67□□□□□ -0.86
SNRNP200-208ENST00000497539 ACP7Q6ZNF0 438 aa9.67□□□□□ -0.86
SNRNP200-208ENST00000497539 PLPPR1Q8TBJ4 325 aa9.67□□□□□ -0.86
SNRNP200-208ENST00000497539 CORTO00230 105 aa9.66□□□□□ -0.86
SNRNP200-208ENST00000497539 PITX3O75364 302 aa9.66□□□□□ -0.86
SNRNP200-208ENST00000497539 BRI3O95415 125 aa9.66□□□□□ -0.86
SNRNP200-208ENST00000497539 HAND1O96004 215 aa9.66□□□□□ -0.86
SNRNP200-208ENST00000497539 RANP62826 216 aaKnown RBP9.66□□□□□ -0.86
SNRNP200-208ENST00000497539 CLEC12BQ2HXU8 276 aa9.66□□□□□ -0.86
SNRNP200-208ENST00000497539 DOLPP1Q86YN1 238 aa9.66□□□□□ -0.86
SNRNP200-208ENST00000497539 FAM110AQ9BQ89 295 aa9.66□□□□□ -0.86
SNRNP200-208ENST00000497539 VSIRQ9H7M9 311 aa9.66□□□□□ -0.86
SNRNP200-208ENST00000497539 OR2W1Q9Y3N9 320 aa9.66□□□□□ -0.86
SNRNP200-208ENST00000497539 A0A087WWC5 75 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms