RNA–Protein interactions for RNA: ENST00000496622.1

SSBP1-213, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 1 (best)

Gene SSBP1, Length 2,620 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-213ENST00000496622 ACSF3Q4G176 576 aaPredicted RBP5.19□□□□□ -1.58
SSBP1-213ENST00000496622 PRSS54Q6PEW0 395 aa5.19□□□□□ -1.58
SSBP1-213ENST00000496622 Q6ZS92 163 aa5.19□□□□□ -1.58
SSBP1-213ENST00000496622 SLC25A26Q70HW3 274 aa5.19□□□□□ -1.58
SSBP1-213ENST00000496622 CXorf67Q86X51 503 aaPredicted RBP5.19□□□□□ -1.58
SSBP1-213ENST00000496622 FBXL14Q8N1E6 418 aa5.19□□□□□ -1.58
SSBP1-213ENST00000496622 SLC30A7Q8NEW0 376 aa5.19□□□□□ -1.58
SSBP1-213ENST00000496622 AQP3Q92482 292 aa5.19□□□□□ -1.58
SSBP1-213ENST00000496622 BORCS8Q96FH0 119 aa5.19□□□□□ -1.58
SSBP1-213ENST00000496622 GMPPAQ96IJ6 420 aaPredicted RBP5.19□□□□□ -1.58
SSBP1-213ENST00000496622 SULT4A1Q9BR01 284 aa5.19□□□□□ -1.58
SSBP1-213ENST00000496622 MIEN1Q9BRT3 115 aa5.19□□□□□ -1.58
SSBP1-213ENST00000496622 C1QTNF5Q9BXJ0 243 aa5.19□□□□□ -1.58
SSBP1-213ENST00000496622 LINC00470Q9BZP3 86 aa5.19□□□□□ -1.58
SSBP1-213ENST00000496622 GP6Q9HCN6 339 aa5.19□□□□□ -1.58
SSBP1-213ENST00000496622 CA10Q9NS85 328 aa5.19□□□□□ -1.58
SSBP1-213ENST00000496622 CTNNBIP1Q9NSA3 81 aaPredicted RBP5.19□□□□□ -1.58
SSBP1-213ENST00000496622 PRR13Q9NZ81 148 aa5.19□□□□□ -1.58
SSBP1-213ENST00000496622 ZNF107Q9UII5 783 aaPredicted RBP5.19□□□□□ -1.58
SSBP1-213ENST00000496622 FAM215AQ9Y5M1 114 aa5.19□□□□□ -1.58
SSBP1-213ENST00000496622 VPS13CQ709C8 3753 aa5.19□□□□□ -1.58
SSBP1-213ENST00000496622 ZNF736B4DX44 427 aaPredicted RBP5.19□□□□□ -1.58
SSBP1-213ENST00000496622 HSD17B6O14756 317 aa5.19□□□□□ -1.58
SSBP1-213ENST00000496622 VSIG10L2P0DP72 767 aa5.19□□□□□ -1.58
SSBP1-213ENST00000496622 BMP5P22003 454 aa5.19□□□□□ -1.58
SSBP1-213ENST00000496622 CFPP27918 469 aa5.19□□□□□ -1.58
SSBP1-213ENST00000496622 OR3A2P47893 321 aa5.19□□□□□ -1.58
SSBP1-213ENST00000496622 SEC61A1P61619 476 aaKnown RBP5.19□□□□□ -1.58
SSBP1-213ENST00000496622 ARFRP1Q13795 201 aa5.19□□□□□ -1.58
SSBP1-213ENST00000496622 VAMP3Q15836 100 aa5.19□□□□□ -1.58
SSBP1-213ENST00000496622 UNQ5815/PRO19632Q6UWF5 114 aa5.19□□□□□ -1.58
SSBP1-213ENST00000496622 DNM1P46Q6ZS02 220 aa5.19□□□□□ -1.58
SSBP1-213ENST00000496622 OR51F2Q8NH61 342 aa5.19□□□□□ -1.58
SSBP1-213ENST00000496622 PP6455Q8WZ26 134 aa5.19□□□□□ -1.58
SSBP1-213ENST00000496622 ZNF75AQ96N20 296 aa5.19□□□□□ -1.58
SSBP1-213ENST00000496622 KRTAP9-2Q9BYQ4 174 aa5.19□□□□□ -1.58
SSBP1-213ENST00000496622 CLN8Q9UBY8 286 aa5.19□□□□□ -1.58
SSBP1-213ENST00000496622 CRYBG3Q68DQ2 2970 aa5.19□□□□□ -1.58
SSBP1-213ENST00000496622 SYNGR1O43759 233 aa5.18□□□□□ -1.58
SSBP1-213ENST00000496622 OR2C1O95371 312 aa5.18□□□□□ -1.58
SSBP1-213ENST00000496622 TFF1P04155 84 aa5.18□□□□□ -1.58
SSBP1-213ENST00000496622 TK1P04183 234 aa5.18□□□□□ -1.58
SSBP1-213ENST00000496622 UBBP0CG47 229 aa5.18□□□□□ -1.58
SSBP1-213ENST00000496622 GLI4P10075 376 aa5.18□□□□□ -1.58
SSBP1-213ENST00000496622 PLP2Q04941 152 aa5.18□□□□□ -1.58
SSBP1-213ENST00000496622 LY6DQ14210 128 aa5.18□□□□□ -1.58
SSBP1-213ENST00000496622 DAZAP2Q15038 168 aaPredicted RBP5.18□□□□□ -1.58
SSBP1-213ENST00000496622 TMEM241Q24JQ0 296 aa5.18□□□□□ -1.58
SSBP1-213ENST00000496622 KRTAP27-1Q3LI81 207 aa5.18□□□□□ -1.58
SSBP1-213ENST00000496622 HEPN1Q6WQI6 88 aa5.18□□□□□ -1.58
SSBP1-213ENST00000496622 C19orf35Q6ZS72 473 aa5.18□□□□□ -1.58
SSBP1-213ENST00000496622 MUC15Q8N387 334 aa5.18□□□□□ -1.58
SSBP1-213ENST00000496622 ZNF611Q8N823 705 aa5.18□□□□□ -1.58
SSBP1-213ENST00000496622 SARAFQ96BY9 339 aa5.18□□□□□ -1.58
SSBP1-213ENST00000496622 STARD4Q96DR4 205 aa5.18□□□□□ -1.58
SSBP1-213ENST00000496622 NEIL1Q96FI4 390 aaPredicted RBP5.18□□□□□ -1.58
SSBP1-213ENST00000496622 HEATR1Q9H583 2144 aaKnown RBP5.18□□□□□ -1.58
SSBP1-213ENST00000496622 CD300LBA8K4G0 201 aa5.18□□□□□ -1.58
SSBP1-213ENST00000496622 H0YL77 283 aa5.18□□□□□ -1.58
SSBP1-213ENST00000496622 OR7C1O76099 320 aaPredicted RBP5.18□□□□□ -1.58
SSBP1-213ENST00000496622 KNG1P01042 644 aa5.18□□□□□ -1.58
SSBP1-213ENST00000496622 HIST1H1DP16402 221 aaKnown RBP5.18□□□□□ -1.58
SSBP1-213ENST00000496622 FABP6P51161 128 aa5.18□□□□□ -1.58
SSBP1-213ENST00000496622 PAX9P55771 341 aa5.18□□□□□ -1.58
SSBP1-213ENST00000496622 UBE2NP61088 152 aaKnown RBP5.18□□□□□ -1.58
SSBP1-213ENST00000496622 GNG3P63215 75 aa5.18□□□□□ -1.58
SSBP1-213ENST00000496622 EIF5AP63241 154 aaKnown RBP5.18□□□□□ -1.58
SSBP1-213ENST00000496622 PAFAH1B2P68402 229 aa5.18□□□□□ -1.58
SSBP1-213ENST00000496622 RHOGP84095 191 aa5.18□□□□□ -1.58
SSBP1-213ENST00000496622 FAM27E3Q08E93 113 aa5.18□□□□□ -1.58
SSBP1-213ENST00000496622 PRDX4Q13162 271 aa5.18□□□□□ -1.58
SSBP1-213ENST00000496622 P2RY6Q15077 328 aa5.18□□□□□ -1.58
SSBP1-213ENST00000496622 MMDQ15546 238 aa5.18□□□□□ -1.58
SSBP1-213ENST00000496622 OR8B8Q15620 311 aa5.18□□□□□ -1.58
SSBP1-213ENST00000496622 IQCJQ1A5X6 159 aa5.18□□□□□ -1.58
SSBP1-213ENST00000496622 RNASEKQ6P5S7 137 aaKnown RBP5.18□□□□□ -1.58
SSBP1-213ENST00000496622 SIGLEC15Q6ZMC9 328 aa5.18□□□□□ -1.58
SSBP1-213ENST00000496622 NIT1Q86X76 327 aa5.18□□□□□ -1.58
SSBP1-213ENST00000496622 Q8NA96 180 aa5.18□□□□□ -1.58
SSBP1-213ENST00000496622 KIRREL1Q96J84 757 aa5.18□□□□□ -1.58
SSBP1-213ENST00000496622 ABHD14AQ9BUJ0 271 aa5.18□□□□□ -1.58
SSBP1-213ENST00000496622 TMED3Q9Y3Q3 217 aa5.18□□□□□ -1.58
SSBP1-213ENST00000496622 C7orf77A4D0Y5 90 aa5.17□□□□□ -1.58
SSBP1-213ENST00000496622 RNF212BA8MTL3 300 aa5.17□□□□□ -1.58
SSBP1-213ENST00000496622 ZNF732B4DXR9 585 aa5.17□□□□□ -1.58
SSBP1-213ENST00000496622 RNASEK-C17orf49H0YIS7 233 aa5.17□□□□□ -1.58
SSBP1-213ENST00000496622 SS18L1O75177 396 aaPredicted RBP5.17□□□□□ -1.58
SSBP1-213ENST00000496622 NDUFB6O95139 128 aa5.17□□□□□ -1.58
SSBP1-213ENST00000496622 AKAIN1P0CW23 69 aa5.17□□□□□ -1.58
SSBP1-213ENST00000496622 DLK1P80370 383 aa5.17□□□□□ -1.58
SSBP1-213ENST00000496622 MORN2Q502X0 79 aa5.17□□□□□ -1.58
SSBP1-213ENST00000496622 ZNF585BQ52M93 769 aa5.17□□□□□ -1.58
SSBP1-213ENST00000496622 ZNF474Q6S9Z5 364 aaPredicted RBP5.17□□□□□ -1.58
SSBP1-213ENST00000496622 Q6ZT83 130 aa5.17□□□□□ -1.58
SSBP1-213ENST00000496622 MUC20Q8N307 709 aaPredicted RBP5.17□□□□□ -1.58
SSBP1-213ENST00000496622 NEU4Q8WWR8 484 aaPredicted RBP5.17□□□□□ -1.58
SSBP1-213ENST00000496622 SNRNP40Q96DI7 357 aaKnown RBP5.17□□□□□ -1.58
SSBP1-213ENST00000496622 CST11Q9H112 138 aa5.17□□□□□ -1.58
SSBP1-213ENST00000496622 Q9N2K0 584 aa5.17□□□□□ -1.58
SSBP1-213ENST00000496622 GCM1Q9NP62 436 aa5.17□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms