RNA–Protein interactions for RNA: ENST00000496136.5

ECHDC3-205, Transcript of enoyl-CoA hydratase domain containing 3, humanhuman

TSL 1 (best)

Gene ECHDC3, Length 1,767 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3-205ENST00000496136 CNTFRP26992 372 aa17.43■□□□□ 0.38
ECHDC3-205ENST00000496136 F2RL1P55085 397 aa17.43■□□□□ 0.38
ECHDC3-205ENST00000496136 Q6ZNX1 250 aa17.43■□□□□ 0.38
ECHDC3-205ENST00000496136 VKORC1L1Q8N0U8 176 aa17.43■□□□□ 0.38
ECHDC3-205ENST00000496136 SSMEM1Q8WWF3 244 aa17.43■□□□□ 0.38
ECHDC3-205ENST00000496136 RBPMSQ93062 196 aaKnown RBP17.43■□□□□ 0.38
ECHDC3-205ENST00000496136 RHOVQ96L33 236 aa17.43■□□□□ 0.38
ECHDC3-205ENST00000496136 COMMD9Q9P000 198 aa17.43■□□□□ 0.38
ECHDC3-205ENST00000496136 TCF19Q9Y242 345 aa17.43■□□□□ 0.38
ECHDC3-205ENST00000496136 ALG5Q9Y673 324 aa17.43■□□□□ 0.38
ECHDC3-205ENST00000496136 HOXA3O43365 443 aaPredicted RBP17.42■□□□□ 0.38
ECHDC3-205ENST00000496136 HRASP01112 189 aa17.42■□□□□ 0.38
ECHDC3-205ENST00000496136 IGLV2-23P01705 113 aa17.42■□□□□ 0.38
ECHDC3-205ENST00000496136 NQO2P16083 231 aa17.42■□□□□ 0.38
ECHDC3-205ENST00000496136 SRPXP78539 464 aa17.42■□□□□ 0.38
ECHDC3-205ENST00000496136 LY6EQ16553 131 aa17.42■□□□□ 0.38
ECHDC3-205ENST00000496136 RBMS3Q6XE24 437 aaKnown RBP17.42■□□□□ 0.38
ECHDC3-205ENST00000496136 C12orf45Q8N5I9 185 aaPredicted RBP17.42■□□□□ 0.38
ECHDC3-205ENST00000496136 COQ8AQ8NI60 647 aa17.42■□□□□ 0.38
ECHDC3-205ENST00000496136 IL22RA2Q969J5 263 aa17.42■□□□□ 0.38
ECHDC3-205ENST00000496136 R3HDM4Q96D70 268 aa17.42■□□□□ 0.38
ECHDC3-205ENST00000496136 SEC22AQ96IW7 307 aa17.42■□□□□ 0.38
ECHDC3-205ENST00000496136 PHB2Q99623 299 aa17.42■□□□□ 0.38
ECHDC3-205ENST00000496136 PLSCR3Q9NRY6 295 aa17.42■□□□□ 0.38
ECHDC3-205ENST00000496136 G6PCP35575 357 aa17.41■□□□□ 0.38
ECHDC3-205ENST00000496136 LYZL2Q7Z4W2 148 aa17.41■□□□□ 0.38
ECHDC3-205ENST00000496136 OR5R1Q8NH85 324 aa17.41■□□□□ 0.38
ECHDC3-205ENST00000496136 TNCP24821 2201 aa17.41■□□□□ 0.38
ECHDC3-205ENST00000496136 A0A0B4J2A0 478 aa17.4■□□□□ 0.38
ECHDC3-205ENST00000496136 A6NDX4 124 aa17.4■□□□□ 0.38
ECHDC3-205ENST00000496136 MARCH11A6NNE9 402 aa17.4■□□□□ 0.38
ECHDC3-205ENST00000496136 FAM157CP0CG43 387 aa17.4■□□□□ 0.38
ECHDC3-205ENST00000496136 SSX9Q7RTT3 188 aa17.4■□□□□ 0.38
ECHDC3-205ENST00000496136 TMEM219Q86XT9 240 aa17.4■□□□□ 0.38
ECHDC3-205ENST00000496136 SLC35G3Q8N808 338 aa17.4■□□□□ 0.38
ECHDC3-205ENST00000496136 UXS1Q8NBZ7 420 aa17.4■□□□□ 0.38
ECHDC3-205ENST00000496136 OR51J1Q9H342 316 aa17.4■□□□□ 0.38
ECHDC3-205ENST00000496136 SHPKQ9UHJ6 478 aa17.4■□□□□ 0.38
ECHDC3-205ENST00000496136 IGKV1-5P01602 117 aa17.4■□□□□ 0.38
ECHDC3-205ENST00000496136 RIPPLY3P57055 190 aa17.4■□□□□ 0.38
ECHDC3-205ENST00000496136 MMDQ15546 238 aa17.4■□□□□ 0.38
ECHDC3-205ENST00000496136 POU2AF1Q16633 256 aa17.4■□□□□ 0.38
ECHDC3-205ENST00000496136 NPBQ8NG41 125 aa17.4■□□□□ 0.38
ECHDC3-205ENST00000496136 RBM14Q96PK6 669 aaKnown RBP17.4■□□□□ 0.38
ECHDC3-205ENST00000496136 TSNAXQ99598 290 aaKnown RBP17.4■□□□□ 0.38
ECHDC3-205ENST00000496136 AIFM2Q9BRQ8 373 aa17.4■□□□□ 0.38
ECHDC3-205ENST00000496136 TNFRSF19Q9NS68 423 aa17.4■□□□□ 0.38
ECHDC3-205ENST00000496136 PITPNC1Q9UKF7 332 aa17.4■□□□□ 0.38
ECHDC3-205ENST00000496136 PLXNB1O43157 2135 aa17.39■□□□□ 0.38
ECHDC3-205ENST00000496136 DBX1A6NMT0 343 aa17.39■□□□□ 0.37
ECHDC3-205ENST00000496136 PSG5Q15238 335 aa17.39■□□□□ 0.37
ECHDC3-205ENST00000496136 DMBX1Q8NFW5 382 aa17.39■□□□□ 0.37
ECHDC3-205ENST00000496136 BTBD17A6NE02 478 aa17.38■□□□□ 0.37
ECHDC3-205ENST00000496136 NCBP2LA6PVI3 153 aaKnown RBP17.38■□□□□ 0.37
ECHDC3-205ENST00000496136 SLC25A17O43808 307 aa17.38■□□□□ 0.37
ECHDC3-205ENST00000496136 OR8H1Q8NGG4 311 aa17.38■□□□□ 0.37
ECHDC3-205ENST00000496136 POMT1Q9Y6A1 747 aa17.38■□□□□ 0.37
ECHDC3-205ENST00000496136 NBR2O15453 112 aa17.38■□□□□ 0.37
ECHDC3-205ENST00000496136 ATG12O94817 140 aa17.38■□□□□ 0.37
ECHDC3-205ENST00000496136 OR2F2O95006 317 aa17.38■□□□□ 0.37
ECHDC3-205ENST00000496136 NDUFA3O95167 84 aa17.38■□□□□ 0.37
ECHDC3-205ENST00000496136 HOXB5P09067 269 aa17.38■□□□□ 0.37
ECHDC3-205ENST00000496136 SAA1P0DJI8 122 aaPredicted RBP17.38■□□□□ 0.37
ECHDC3-205ENST00000496136 VDAC1P21796 283 aa17.38■□□□□ 0.37
ECHDC3-205ENST00000496136 AKR1C2P52895 323 aa17.38■□□□□ 0.37
ECHDC3-205ENST00000496136 ERVK-16P61578 105 aa17.38■□□□□ 0.37
ECHDC3-205ENST00000496136 OR4A47Q6IF82 309 aa17.38■□□□□ 0.37
ECHDC3-205ENST00000496136 SLC25A33Q9BSK2 321 aa17.38■□□□□ 0.37
ECHDC3-205ENST00000496136 VPREB3Q9UKI3 123 aa17.38■□□□□ 0.37
ECHDC3-205ENST00000496136 PIGBOS1A0A0B4J2F0 54 aa17.37■□□□□ 0.37
ECHDC3-205ENST00000496136 RRHO14718 337 aa17.37■□□□□ 0.37
ECHDC3-205ENST00000496136 ADAP1O75689 374 aa17.37■□□□□ 0.37
ECHDC3-205ENST00000496136 CRYGBP07316 175 aa17.37■□□□□ 0.37
ECHDC3-205ENST00000496136 IL6RP08887 468 aaPredicted RBP17.37■□□□□ 0.37
ECHDC3-205ENST00000496136 UBE2KP61086 200 aa17.37■□□□□ 0.37
ECHDC3-205ENST00000496136 PUSL1Q8N0Z8 303 aaKnown RBP17.37■□□□□ 0.37
ECHDC3-205ENST00000496136 ZNF418Q8TF45 676 aaPredicted RBP17.37■□□□□ 0.37
ECHDC3-205ENST00000496136 RRNAD1Q96FB5 475 aaKnown RBP17.37■□□□□ 0.37
ECHDC3-205ENST00000496136 DUX5Q96PT3 197 aa17.37■□□□□ 0.37
ECHDC3-205ENST00000496136 TMEM140Q9NV12 185 aa17.37■□□□□ 0.37
ECHDC3-205ENST00000496136 C1RLQ9NZP8 487 aa17.37■□□□□ 0.37
ECHDC3-205ENST00000496136 CUBNO60494 3623 aa17.37■□□□□ 0.37
ECHDC3-205ENST00000496136 A0A0G2JRQ6 117 aa17.36■□□□□ 0.37
ECHDC3-205ENST00000496136 DUXBA0A1W2PPF3 345 aa17.36■□□□□ 0.37
ECHDC3-205ENST00000496136 SSNA1O43805 119 aa17.36■□□□□ 0.37
ECHDC3-205ENST00000496136 OR2A4O95047 310 aa17.36■□□□□ 0.37
ECHDC3-205ENST00000496136 P0C879 139 aa17.36■□□□□ 0.37
ECHDC3-205ENST00000496136 IZUMO4Q1ZYL8 232 aa17.36■□□□□ 0.37
ECHDC3-205ENST00000496136 VMA21Q3ZAQ7 101 aa17.36■□□□□ 0.37
ECHDC3-205ENST00000496136 H2BFWTQ7Z2G1 175 aa17.36■□□□□ 0.37
ECHDC3-205ENST00000496136 FAM71E2Q8N5Q1 922 aa17.36■□□□□ 0.37
ECHDC3-205ENST00000496136 TMEM86BQ8N661 226 aa17.36■□□□□ 0.37
ECHDC3-205ENST00000496136 TEX45Q8NA69 505 aa17.36■□□□□ 0.37
ECHDC3-205ENST00000496136 LSM10Q969L4 123 aaKnown RBP17.36■□□□□ 0.37
ECHDC3-205ENST00000496136 OR2A7Q96R45 310 aa17.36■□□□□ 0.37
ECHDC3-205ENST00000496136 CHIAQ9BZP6 476 aa17.36■□□□□ 0.37
ECHDC3-205ENST00000496136 FBXL15Q9H469 300 aa17.36■□□□□ 0.37
ECHDC3-205ENST00000496136 ESM1Q9NQ30 184 aa17.36■□□□□ 0.37
ECHDC3-205ENST00000496136 KIAA1456Q9P272 454 aa17.36■□□□□ 0.37
ECHDC3-205ENST00000496136 METTL1Q9UBP6 276 aaKnown RBP17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms